Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11169 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 6.3e-114 414.1 204 100.0
SEGI_23982 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 5.0e-103 377.9 198 94.9
SEGI_20194 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.3e-102 375.2 198 93.9
SEGI_07067 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 4.3e-102 374.8 198 93.9
SEGI_25675 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 4.3e-102 374.8 198 93.9
SEGI_08146 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 5.2e-100 367.9 198 91.9
SEGI_09631 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 8.6e-95 350.5 191 92.1
SEGI_33261 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 4.7e-93 344.7 199 86.4
SEGI_06287 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.8e-92 342.8 198 86.9
SEGI_40163 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 6.8e-92 340.9 191 89.0
SEGI_23133 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.7e-87 326.2 179 89.9
SEGI_25221 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.4e-84 316.6 179 88.8
SEGI_32947 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.2e-82 309.3 179 87.2
SEGI_12188 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 8.4e-82 307.4 205 77.6
SEGI_32074 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.3e-79 300.1 163 92.0
SEGI_10600 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.0e-75 286.2 161 87.6
SEGI_09861 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.1e-72 276.2 170 82.4
SEGI_18457 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.1e-72 276.2 170 82.4
SEGI_39914 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.7e-71 273.1 198 74.7
SEGI_31907 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.6e-69 266.5 203 65.5
SEGI_39946 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.9e-65 253.1 198 68.2
SEGI_22792 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.3e-63 246.9 147 85.7
SEGI_39067 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.3e-63 246.1 209 64.6
SEGI_34291 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.2e-50 203.0 110 92.7
SEGI_39273 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 4.2e-49 198.7 110 90.0
SEGI_19719 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.8e-45 186.0 110 84.5
SEGI_35352 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 8.2e-45 184.5 121 77.7
SEGI_28848 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 9.0e-44 181.0 96 93.8
SEGI_15741 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.1e-41 174.1 101 85.1
SEGI_16358 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.6e-40 169.1 147 60.5
SEGI_21560 Sequoiadendron giganteum HOM05D003801 ORTHO05D010437 5.1e-39 165.2 90 86.7
SEGI_09821 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 7.2e-33 144.8 134 50.7
SEGI_13896 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.6e-32 143.7 150 48.0
SEGI_21076 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.6e-30 136.3 134 47.0
SEGI_36527 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.1e-28 129.4 132 52.3
SEGI_23604 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 6.9e-28 128.3 132 52.3
SEGI_14935 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.5e-27 127.1 132 52.3
SEGI_19975 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.5e-27 127.1 132 52.3
SEGI_18898 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.3e-26 124.0 132 50.0
SEGI_36496 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 4.5e-19 99.0 119 43.7
SEGI_16695 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.0e-18 97.8 171 36.8
SEGI_34598 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.3e-18 97.4 188 31.9
SEGI_40772 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.3e-18 97.4 78 56.4
SEGI_40900 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 2.9e-18 96.3 82 54.9
SEGI_32808 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 9.4e-17 91.3 121 41.3
SEGI_08283 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.6e-16 90.5 114 40.4
SEGI_14230 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 1.6e-16 90.5 114 40.4
SEGI_11783 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 3.3e-14 82.8 142 35.2
SEGI_17936 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 9.7e-14 81.3 118 33.9
Pp3c23_16880 Physcomitrium patens HOM05D000824 ORTHO05D002221 1.4e-12 77.4 134 30.6
Thecc.09G080300 Theobroma cacao HOM05D000824 ORTHO05D010437 1.4e-12 77.4 196 31.1
Mapoly0125s0021 Marchantia polymorpha HOM05D000824 ORTHO05D002221 3.1e-12 76.3 118 30.5
SEGI_32406 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 4.1e-12 75.9 113 34.5
SEGI_01360 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 7.0e-12 75.1 82 46.3
Pp3c20_10450 Physcomitrium patens HOM05D000824 ORTHO05D002221 9.1e-12 74.7 109 34.9
SEGI_06336 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.6e-11 73.9 148 31.1
QL02p061033 Quercus lobata HOM05D000824 ORTHO05D002221 1.0e-10 71.2 129 34.1
SEGI_04497 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.7e-10 70.5 148 30.4
AT2G06510 Arabidopsis thaliana HOM05D000824 ORTHO05D002221 5.0e-10 68.9 117 34.2
Medtr3g047950 Medicago truncatula HOM05D000824 ORTHO05D002221 6.5e-10 68.6 118 32.2
RcHm_v2.0_Chr7g0207931 Rosa chinensis HOM05D000824 ORTHO05D010437 8.5e-10 68.2 204 28.9
Migut.J00947 Erythranthe guttata HOM05D000824 ORTHO05D002221 1.5e-09 67.4 168 29.2
CDE11G0897 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 3.2e-09 66.2 119 29.4
Glyma.09G213300 Glycine max HOM05D000824 ORTHO05D010437 3.2e-09 66.2 229 30.6
MBI19_g11847_MAGBIO Magnolia biondii HOM05D000824 ORTHO05D002221 3.2e-09 66.2 128 30.5
HPP92_014304 Vanilla planifolia HOM05D000824 ORTHO05D002221 3.2e-09 66.2 110 32.7
EL10Ac5g11968 Beta vulgaris HOM05D000824 ORTHO05D002221 5.5e-09 65.5 134 32.1
CSS0020965 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D002221 5.5e-09 65.5 115 32.2
Ah.09g231350 Amaranthus hybridus HOM05D000824 ORTHO05D002221 7.2e-09 65.1 107 33.6
Carub.0003s2727 Capsella rubella HOM05D000824 ORTHO05D002221 7.2e-09 65.1 117 34.2
Migut.A00558 Erythranthe guttata HOM05D000824 ORTHO05D002221 7.2e-09 65.1 111 35.1
SEGI_20289 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 7.2e-09 65.1 84 38.1
AL3G43800 Arabidopsis lyrata HOM05D000824 ORTHO05D002221 9.4e-09 64.7 119 34.5
Duzib168G1443 Durio zibethinus HOM05D000824 ORTHO05D002221 9.4e-09 64.7 132 31.1
Hma1.2p1_0544F.1_g175470 Hydrangea macrophylla HOM05D000824 ORTHO05D002221 9.4e-09 64.7 125 31.2
vmacro00064 Vaccinium macrocarpon HOM05D000824 ORTHO05D002221 9.4e-09 64.7 146 31.5
GSVIVG01015111001 Vitis vinifera HOM05D000824 ORTHO05D002221 9.4e-09 64.7 107 33.6
COL.COLO4_18126 Corchorus olitorius HOM05D000824 ORTHO05D002221 1.2e-08 64.3 125 33.6
SEGI_20150 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.2e-08 64.3 145 32.4
unitig_22.g5102 Utricularia gibba HOM05D000824 ORTHO05D002221 1.2e-08 64.3 131 32.8
HPP92_012596 Vanilla planifolia HOM05D000824 ORTHO05D002221 1.2e-08 64.3 109 32.1
Ciclev10010492m.g Citrus clementina HOM05D000824 ORTHO05D002221 1.6e-08 63.9 142 31.7
Thhalv10001929m.g Eutrema salsugineum HOM05D000824 ORTHO05D002221 1.6e-08 63.9 117 32.5
Atru.chr7.1670 Acer truncatum HOM05D000824 ORTHO05D002221 2.1e-08 63.5 132 31.1
CBR_g36292 Chara braunii HOM05D000824 ORTHO05D002221 2.1e-08 63.5 107 31.8
HanXRQChr10g0319611 Helianthus annuus HOM05D000824 ORTHO05D002221 2.1e-08 63.5 132 31.1
CDE01G0675 Ceratophyllum demersum HOM05D000824 ORTHO05D002221 2.7e-08 63.2 120 32.5
FAN23G0408 Fragaria x ananassa HOM05D000824 ORTHO05D002221 2.7e-08 63.2 124 29.8
Dinv42372 Davidia involucrata HOM05D000824 ORTHO05D002221 3.6e-08 62.8 126 31.7
FAN08G2719 Fragaria x ananassa HOM05D000824 ORTHO05D002221 3.6e-08 62.8 133 32.3
SEGI_06573 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.6e-08 62.8 71 42.3
Dinv22867 Davidia involucrata HOM05D000824 ORTHO05D002221 4.7e-08 62.4 173 28.9
Eucgr.C03561 Eucalyptus grandis HOM05D000824 ORTHO05D002221 4.7e-08 62.4 107 33.6
FvH4_5g23941 Fragaria vesca HOM05D000824 ORTHO05D002221 4.7e-08 62.4 133 31.6
FAN18G2954 Fragaria x ananassa HOM05D000824 ORTHO05D002221 4.7e-08 62.4 133 31.6
FAN18G3561 Fragaria x ananassa HOM05D000824 ORTHO05D002221 4.7e-08 62.4 133 31.6
Lj6g0016995 Lotus japonicus HOM05D000824 ORTHO05D002221 4.7e-08 62.4 109 32.1
SEGI_28956 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 4.7e-08 62.4 137 31.4
Aqoxy7G04110 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 6.1e-08 62.0 119 31.1
Aqoxy7G04112 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 6.1e-08 62.0 119 31.1
CAN.G148.16 Capsicum annuum HOM05D000824 ORTHO05D002221 6.1e-08 62.0 131 29.8
FAN26G2843 Fragaria x ananassa HOM05D000824 ORTHO05D002221 6.1e-08 62.0 106 31.1
Gohir.D13G197000 Gossypium hirsutum HOM05D000824 ORTHO05D002221 6.1e-08 62.0 107 32.7
Gorai.013G225700 Gossypium raimondii HOM05D000824 ORTHO05D002221 6.1e-08 62.0 107 32.7
TWI34G1166 Tripterygium wilfordii HOM05D000824 ORTHO05D002221 6.1e-08 62.0 124 31.5
FAN26G2759 Fragaria x ananassa HOM05D000824 ORTHO05D002221 8.0e-08 61.6 124 29.0
SEGI_32376 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 8.0e-08 61.6 137 31.4
AUR62018601 Chenopodium quinoa HOM05D000824 ORTHO05D002221 1.0e-07 61.2 120 30.0
Cc08_g05150 Coffea canephora HOM05D000824 ORTHO05D002221 1.0e-07 61.2 143 31.5
SEGI_29792 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.0e-07 61.2 158 25.9
Eucgr.D02593 Eucalyptus grandis HOM05D000824 ORTHO05D002221 1.4e-07 60.8 70 40.0
Psat2g142080 Pisum sativum HOM05D000824 ORTHO05D002221 1.4e-07 60.8 164 28.7
Actinidia32773 Actinidia chinensis HOM05D000824 ORTHO05D002221 1.8e-07 60.5 148 31.1
ATR0598G158 Amborella trichopoda HOM05D000824 ORTHO05D002221 1.8e-07 60.5 107 30.8
FvH4_1g08261 Fragaria vesca HOM05D000824 ORTHO05D002221 1.8e-07 60.5 106 31.1
Carub.0007s2202 Capsella rubella HOM05D000824 ORTHO05D002221 2.3e-07 60.1 127 30.7
AUR62007386 Chenopodium quinoa HOM05D000824 ORTHO05D002221 2.3e-07 60.1 125 31.2
Dinv28015 Davidia involucrata HOM05D000824 ORTHO05D002221 2.3e-07 60.1 125 32.8
FAN19G2973 Fragaria x ananassa HOM05D000824 ORTHO05D002221 2.3e-07 60.1 124 29.0
Nitab4.5_0006563g0010 Nicotiana tabacum HOM05D000824 ORTHO05D002221 2.3e-07 60.1 159 27.7
Potri.018G065300 Populus trichocarpa HOM05D000824 ORTHO05D002221 2.3e-07 60.1 148 27.0
RcHm_v2.0_Chr2g0094351 Rosa chinensis HOM05D000824 ORTHO05D002221 2.3e-07 60.1 124 28.2
Sabra18G0057900 Salix brachista HOM05D000824 ORTHO05D002221 2.3e-07 60.1 126 32.5
SEGI_06941 Sequoiadendron giganteum HOM05D000824 ORTHO05D003555 2.3e-07 60.1 55 67.3
PGSC0003DMG400044420 Solanum tuberosum HOM05D000824 ORTHO05D002221 2.3e-07 60.1 128 28.9
Lj2g0019271 Lotus japonicus HOM05D000824 ORTHO05D002221 3.0e-07 59.7 114 37.7
SEGI_01683 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 3.0e-07 59.7 119 34.5
Solyc05g025590.4 Solanum lycopersicum HOM05D000824 ORTHO05D002221 5.2e-07 58.9 112 30.4
SGA_v2.0_scaffold89G27397 Striga asiatica HOM05D000824 ORTHO05D002221 5.2e-07 58.9 113 31.0
SMO115G0028 Selaginella moellendorffii HOM05D000824 ORTHO05D002221 6.8e-07 58.5 107 28.0
Sc19g0001900 Simmondsia chinensis HOM05D000824 ORTHO05D002221 6.8e-07 58.5 124 31.5
GSVIVG01022784001 Vitis vinifera HOM05D000824 ORTHO05D002221 6.8e-07 58.5 112 32.1
CSS0033943 Camellia sinensis var. sinensis HOM05D000824 ORTHO05D002221 8.8e-07 58.2 109 32.1
ClCG11G001530 Citrullus lanatus HOM05D000824 ORTHO05D002221 8.8e-07 58.2 106 34.0
CsaV3_2G001260 Cucumis sativus L. HOM05D000824 ORTHO05D002221 8.8e-07 58.2 106 34.0
Sed0015067 Sechium edule HOM05D000824 ORTHO05D002221 8.8e-07 58.2 106 33.0
SMO119G0217 Selaginella moellendorffii HOM05D000824 ORTHO05D002221 8.8e-07 58.2 107 28.0
Aqoxy7G02240 Aquilegia oxysepala HOM05D000824 ORTHO05D002221 1.2e-06 57.8 112 33.0
Phvul.002G128800 Phaseolus vulgaris HOM05D000824 ORTHO05D002221 1.2e-06 57.8 113 32.7
QL12p000778 Quercus lobata HOM05D000824 ORTHO05D002221 1.2e-06 57.8 83 34.9
MSTRG.25728 Avicennia marina HOM05D000824 ORTHO05D002221 1.5e-06 57.4 111 33.3
CiPaw.11G103100 Carya illinoinensis HOM05D000824 ORTHO05D002221 1.5e-06 57.4 111 29.7
Nitab4.5_0000024g0120 Nicotiana tabacum HOM05D000824 ORTHO05D002221 1.5e-06 57.4 159 27.0
SEGI_21687 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 1.5e-06 57.4 58 46.6
TAR375G1100 Trochodendron aralioides HOM05D000824 ORTHO05D002221 1.5e-06 57.4 111 33.3
MD15G1214800 Malus domestica HOM05D000824 ORTHO05D002221 2.0e-06 57.0 107 29.9
SEGI_16551 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 2.0e-06 57.0 144 28.5
SGA_v2.0_scaffold96G29068 Striga asiatica HOM05D000824 ORTHO05D002221 2.6e-06 56.6 113 31.0
VMungo1215G0840 Vigna mungo HOM05D000824 ORTHO05D002221 2.6e-06 56.6 138 30.4
SEGI_05176 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.4e-06 56.2 106 30.2
SEGI_09929 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.4e-06 56.2 59 45.8
SEGI_34155 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.4e-06 56.2 98 32.7
AL1G45720 Arabidopsis lyrata HOM05D000824 ORTHO05D002221 4.4e-06 55.8 128 30.5
Ca_25103_v3 Cicer arietinum L. HOM05D000824 ORTHO05D002221 4.4e-06 55.8 166 27.7
Haze_08068 Corylus avellana HOM05D000824 ORTHO05D002221 5.7e-06 55.5 113 30.1
Lj8C334G12 Lonicera japonica HOM05D000824 ORTHO05D002221 5.7e-06 55.5 126 29.4
SHI07207 Sapria himalayana HOM05D000824 ORTHO05D002221 5.7e-06 55.5 113 30.1
Thecc.03G317500 Theobroma cacao HOM05D000824 ORTHO05D002221 5.7e-06 55.5 105 33.3
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 7.5e-06 55.1 105 34.3
TWI56G1436 Tripterygium wilfordii HOM05D000824 ORTHO05D002221 7.5e-06 55.1 181 27.6
Atru.chr7.1671 Acer truncatum HOM05D000824 ORTHO05D010437 9.8e-06 54.7 130 28.5
Cfa012589 Carpinus fangiana HOM05D000824 ORTHO05D002221 9.8e-06 54.7 164 25.0
Glyma.09G213500 Glycine max HOM05D000824 ORTHO05D002221 9.8e-06 54.7 157 24.8


User provided reference genes

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