Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1588.2 809 100.0
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1319.3 665 100.0
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 1.4e-233 813.5 807 53.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 1.2e-229 800.4 806 54.1
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 1.4e-228 797.0 809 53.6
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 1.7e-226 790.0 813 54.2
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 4.9e-226 788.5 808 53.2
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 5.4e-225 785.0 799 53.8
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 6.0e-224 781.6 809 54.3
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 2.3e-223 779.6 806 52.5
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 6.6e-223 778.1 806 53.0
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 1.4e-220 770.4 801 53.3
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 9.9e-219 764.2 807 52.4
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 3.8e-218 762.3 802 52.4
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 8.4e-218 761.1 808 52.2
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 4.2e-217 758.8 800 52.2
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 5.4e-217 758.4 798 52.8
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 1.6e-216 756.9 803 52.4
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.1e-216 756.5 811 52.2
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.1e-216 756.5 811 52.2
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 2.1e-216 756.5 810 52.0
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 4.6e-216 755.4 803 51.8
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 1.7e-215 753.4 802 51.7
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 3.0e-215 752.7 807 51.7
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 3.9e-215 752.3 798 52.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 6.6e-215 751.5 807 51.9
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 8.7e-215 751.1 804 52.4
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 1.9e-214 750.0 806 51.5
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 4.3e-214 748.8 801 50.9
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.3e-213 747.3 809 51.5
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 2.8e-213 746.1 811 50.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 3.6e-213 745.7 809 51.5
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.1e-212 744.2 810 51.4
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.4e-212 743.8 809 51.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.4e-212 743.8 809 51.4
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 1.8e-212 743.4 812 51.6
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 1.8e-212 743.4 809 51.3
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.8e-212 743.4 809 51.3
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 4.0e-212 742.3 806 50.5
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 4.0e-212 742.3 803 50.7
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 3.4e-211 739.2 805 50.3
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 4.5e-211 738.8 795 52.1
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 7.6e-211 738.0 802 50.5
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 1.7e-210 736.9 814 50.2
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 1.7e-210 736.9 771 53.3
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 1.7e-210 736.9 808 50.1
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 2.2e-210 736.5 806 50.6
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 3.8e-210 735.7 800 50.6
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 4.9e-210 735.3 811 50.7
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 8.4e-210 734.6 804 50.0
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 1.1e-209 734.2 802 50.9
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 1.1e-209 734.2 802 50.5
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 1.9e-209 733.4 807 50.4
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 5.4e-209 731.9 801 50.6
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 1.6e-208 730.3 800 50.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 2.1e-208 729.9 808 50.1
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 2.1e-208 729.9 804 49.3
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 2.1e-208 729.9 805 50.6
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 3.5e-208 729.2 808 49.6
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 7.9e-208 728.0 770 51.8
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 7.9e-208 728.0 802 50.1
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 6.7e-207 724.9 798 49.6
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 6.7e-207 724.9 807 50.3
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 1.1e-206 724.2 772 51.0
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 1.5e-206 723.8 801 49.1
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 2.5e-206 723.0 806 49.3
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 2.5e-206 723.0 806 49.4
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 4.3e-206 722.2 773 50.8
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 4.3e-206 722.2 773 50.8
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 7.4e-206 721.5 802 49.3
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 1.3e-205 720.7 806 49.5
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 1.6e-205 720.3 802 51.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 2.1e-205 719.9 809 50.4
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 2.8e-205 719.5 807 48.8
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 2.8e-205 719.5 807 49.7
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 3.7e-205 719.2 806 49.6
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 3.7e-205 719.2 806 49.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 5.3e-204 715.3 800 49.4
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 5.3e-204 715.3 802 49.1
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 6.9e-204 714.9 806 49.0
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 1.5e-203 713.8 807 48.9
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 5.8e-203 711.8 769 50.7
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 2.9e-202 709.5 807 49.2
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 1.6e-200 703.7 801 49.4
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 2.7e-200 703.0 804 47.5
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 4.6e-200 702.2 829 47.2
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 3.0e-199 699.5 800 47.5
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 3.9e-199 699.1 804 47.4
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 2.5e-198 696.4 775 49.2
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 4.3e-198 695.7 770 49.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 1.1e-196 691.0 806 49.9
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 3.1e-196 689.5 772 49.9
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 2.6e-195 686.4 807 47.3
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 2.9e-194 682.9 808 47.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 4.2e-193 679.1 769 50.2
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 5.1e-191 672.2 660 53.3
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 3.7e-189 666.0 770 49.1
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.3e-178 630.9 810 44.7
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.2e-176 624.4 811 44.5
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 2.1e-176 623.6 824 44.8
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 3.9e-167 592.8 623 54.6
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 2.0e-163 580.5 761 46.5
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.7e-162 577.4 772 42.2
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 5.7e-158 562.4 941 38.5
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 2.1e-120 437.6 911 32.9
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 2.4e-111 407.5 456 51.1
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 4.4e-110 403.3 417 52.3
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 3.7e-88 330.5 373 49.6
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.9e-84 318.2 365 49.0
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 3.2e-68 264.2 873 28.4
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 9.7e-65 252.7 665 32.5
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.3e-64 252.3 315 43.2
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 8.2e-48 196.4 203 56.2
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 2.5e-44 184.9 606 28.2
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.7e-37 162.2 170 55.3
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.8e-31 142.1 139 59.0
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-29 135.6 130 56.2
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.6e-19 102.4 724 24.6
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 3.0e-13 81.6 154 42.2
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.6e-11 75.9 144 42.4
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 4.0e-10 71.2 150 38.7
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 5.2e-10 70.9 150 32.0


User provided reference genes

Program Settings