Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08904 Sequoiadendron giganteum HOM05D006131 ORTHO05D021223 2.7e-55 218.4 109 100.0
Mapoly0024s0038 Marchantia polymorpha HOM05D006131 ORTHO05D008649 1.1e-19 100.1 76 56.6
A03p29960 Brassica napus HOM05D006131 ORTHO05D008649 2.0e-18 95.9 77 58.4
BraA03t12185Z Brassica rapa HOM05D006131 ORTHO05D008649 2.0e-18 95.9 77 58.4
A03p29990 Brassica napus HOM05D006131 ORTHO05D021223 5.9e-18 94.4 74 59.5
BolC3t15934H Brassica oleracea HOM05D006131 ORTHO05D008649 5.9e-18 94.4 77 55.8
Thhalv10028396m.g Eutrema salsugineum HOM05D006131 ORTHO05D008649 5.9e-18 94.4 77 55.8
Sp6g04490 Schrenkiella parvula HOM05D006131 ORTHO05D008649 5.9e-18 94.4 77 55.8
C03p36250 Brassica napus HOM05D006131 ORTHO05D008649 7.8e-18 94.0 77 55.8
Pp3c7_13710 Physcomitrium patens HOM05D006131 ORTHO05D008649 2.3e-17 92.4 76 53.9
Gohir.A06G150500 Gossypium hirsutum HOM05D006131 ORTHO05D008649 2.9e-17 92.0 93 46.2
Ciclev10014171m.g Citrus clementina HOM05D006131 ORTHO05D008649 3.8e-17 91.7 78 53.8
CARHR253090 Cardamine hirsuta HOM05D006131 ORTHO05D008649 6.6e-17 90.9 77 54.5
QL05p072288 Quercus lobata HOM05D006131 ORTHO05D008649 6.6e-17 90.9 77 54.5
Duzib235G1477 Durio zibethinus HOM05D006131 ORTHO05D008649 8.6e-17 90.5 74 54.1
Gohir.D06G156700 Gossypium hirsutum HOM05D006131 ORTHO05D008649 8.6e-17 90.5 75 52.0
Gorai.010G183100 Gossypium raimondii HOM05D006131 ORTHO05D008649 8.6e-17 90.5 75 52.0
AL6G47890 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.1e-16 90.1 77 54.5
AL6G47902 Arabidopsis lyrata HOM05D006131 ORTHO05D008649 1.1e-16 90.1 77 54.5
CANSAT56G3890 Cannabis sativa HOM05D006131 ORTHO05D008649 1.1e-16 90.1 77 53.2
Carub.0006s3219 Capsella rubella HOM05D006131 ORTHO05D008649 1.1e-16 90.1 77 54.5
MD10G1325600 Malus domestica HOM05D006131 ORTHO05D008649 1.1e-16 90.1 77 53.2
Thecc.06G226400 Theobroma cacao HOM05D006131 ORTHO05D008649 1.1e-16 90.1 75 52.0
Cpa.g.sc152.47 Carica papaya HOM05D006131 ORTHO05D008649 1.5e-16 89.7 78 53.8
CiPaw.09G096900 Carya illinoinensis HOM05D006131 ORTHO05D008649 1.5e-16 89.7 83 49.4
AT4G04350 Arabidopsis thaliana HOM05D006131 ORTHO05D008649 1.9e-16 89.4 77 54.5
arahy.Tifrunner.gnm1.ann1.34DY78 Arachis hypogaea HOM05D006131 ORTHO05D008649 1.9e-16 89.4 78 51.3
arahy.Tifrunner.gnm1.ann1.EVIY4K Arachis hypogaea HOM05D006131 ORTHO05D008649 1.9e-16 89.4 78 51.3
Eucgr.E03997 Eucalyptus grandis HOM05D006131 ORTHO05D008649 1.9e-16 89.4 78 51.3
GSVIVG01012668001 Vitis vinifera HOM05D006131 ORTHO05D008649 1.9e-16 89.4 78 52.6
MBI07_g07142_MAGBIO Magnolia biondii HOM05D006131 ORTHO05D008649 2.5e-16 89.0 78 52.6
Nn7g38008 Nelumbo nucifera HOM05D006131 ORTHO05D008649 2.5e-16 89.0 78 53.8
Potri.011G009600 Populus trichocarpa HOM05D006131 ORTHO05D008649 2.5e-16 89.0 75 57.3
Zm00001eb334790 Zea mays HOM05D006131 ORTHO05D008649 2.5e-16 89.0 110 41.8
Manes.17G028300 Manihot esculenta HOM05D006131 ORTHO05D008649 4.3e-16 88.2 75 54.7
Psat4g005600 Pisum sativum HOM05D006131 ORTHO05D008649 4.3e-16 88.2 78 50.0
Sabra11G0007600 Salix brachista HOM05D006131 ORTHO05D008649 4.3e-16 88.2 76 55.3
Sed0009561 Sechium edule HOM05D006131 ORTHO05D008649 4.3e-16 88.2 78 53.8
THA.LOC104806315 Tarenaya hassleriana HOM05D006131 ORTHO05D008649 4.3e-16 88.2 78 53.8
CSS0011000 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 5.6e-16 87.8 76 52.6
COL.COLO4_31819 Corchorus olitorius HOM05D006131 ORTHO05D008649 7.3e-16 87.4 75 52.0
Lj1C1234T13 Lonicera japonica HOM05D006131 ORTHO05D008649 7.3e-16 87.4 78 52.6
TPR.G36994 Trifolium pratense HOM05D006131 ORTHO05D008649 7.3e-16 87.4 78 50.0
Aa31LG9G9850 Aethionema arabicum HOM05D006131 ORTHO05D008649 9.5e-16 87.0 77 51.9
Medtr4g132500 Medicago truncatula HOM05D006131 ORTHO05D008649 9.5e-16 87.0 78 50.0
Os01g0120300 Oryza sativa ssp. japonica HOM05D006131 ORTHO05D008649 9.5e-16 87.0 80 51.2
Ca_21065_v3 Cicer arietinum L. HOM05D006131 ORTHO05D008649 1.2e-15 86.7 78 50.0
Haze_06845 Corylus avellana HOM05D006131 ORTHO05D008649 1.2e-15 86.7 78 51.3
Actinidia02346 Actinidia chinensis HOM05D006131 ORTHO05D008649 2.1e-15 85.9 76 51.3
ATR0317G090 Amborella trichopoda HOM05D006131 ORTHO05D021223 2.8e-15 85.5 75 52.0
Cc09_g01330 Coffea canephora HOM05D006131 ORTHO05D008649 3.6e-15 85.1 78 47.4
PSO541G3086 Papaver somniferum HOM05D006131 ORTHO05D008649 3.6e-15 85.1 78 50.0
VMungo1215G1261 Vigna mungo HOM05D006131 ORTHO05D008649 3.6e-15 85.1 74 50.0
Aqoxy1G03037 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 4.7e-15 84.7 78 51.3
CAN.G1014.35 Capsicum annuum HOM05D006131 ORTHO05D008649 4.7e-15 84.7 78 51.3
Glyma.07G263100 Glycine max HOM05D006131 ORTHO05D008649 4.7e-15 84.7 78 47.4
Hma1.2p1_0298F.1_g117540 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 4.7e-15 84.7 78 50.0
Hma1.2p1_0298F.1_g117550 Hydrangea macrophylla HOM05D006131 ORTHO05D008649 4.7e-15 84.7 78 50.0
unitig_748.g7594 Utricularia gibba HOM05D006131 ORTHO05D008649 4.7e-15 84.7 73 54.8
Cfa000174 Carpinus fangiana HOM05D006131 ORTHO05D008649 6.1e-15 84.3 78 50.0
Nitab4.5_0001409g0150 Nicotiana tabacum HOM05D006131 ORTHO05D008649 6.1e-15 84.3 76 52.6
Nitab4.5_0004743g0170 Nicotiana tabacum HOM05D006131 ORTHO05D008649 6.1e-15 84.3 76 52.6
vmacro03670 Vaccinium macrocarpon HOM05D006131 ORTHO05D008649 6.1e-15 84.3 76 51.3
ATR0317G053 Amborella trichopoda HOM05D006131 ORTHO05D008649 8.0e-15 84.0 75 50.7
CsaV3_6G048760 Cucumis sativus L. HOM05D006131 ORTHO05D008649 8.0e-15 84.0 76 51.3
Peaxi162Scf00178g00056 Petunia axillaris HOM05D006131 ORTHO05D008649 8.0e-15 84.0 78 50.0
Solyc02g080990.2 Solanum lycopersicum HOM05D006131 ORTHO05D008649 8.0e-15 84.0 76 52.6
Sopen02g025670 Solanum pennellii HOM05D006131 ORTHO05D008649 8.0e-15 84.0 76 52.6
Aqoxy1G02667 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 1.0e-14 83.6 78 51.3
Aqoxy1G02886 Aquilegia oxysepala HOM05D006131 ORTHO05D008649 1.0e-14 83.6 78 51.3
MD05G1351000 Malus domestica HOM05D006131 ORTHO05D021223 1.0e-14 83.6 77 49.4
Oeu051199.1 Olea europaea HOM05D006131 ORTHO05D008649 1.0e-14 83.6 76 48.7
Rhsim13G0150700 Rhododendron simsii HOM05D006131 ORTHO05D008649 1.0e-14 83.6 71 52.1
Lsat_1_v5_gn_4_61541 Lactuca sativa HOM05D006131 ORTHO05D008649 1.4e-14 83.2 77 50.6
Prupe.4G016400 Prunus persica HOM05D006131 ORTHO05D008649 1.4e-14 83.2 76 50.0
ClCG01G021720 Citrullus lanatus HOM05D006131 ORTHO05D008649 1.8e-14 82.8 78 46.2
Migut.M01378 Erythranthe guttata HOM05D006131 ORTHO05D008649 1.8e-14 82.8 75 52.0
PGR042G2674 Punica granatum HOM05D006131 ORTHO05D008649 1.8e-14 82.8 78 50.0
CBR_g51980 Chara braunii HOM05D006131 ORTHO05D008649 2.3e-14 82.4 81 46.9
Hund21429 Selenicereus undatus HOM05D006131 ORTHO05D008649 2.3e-14 82.4 75 53.3
SGA_v2.0_scaffold7G03775 Striga asiatica HOM05D006131 ORTHO05D008649 2.3e-14 82.4 76 51.3
AUR62012745 Chenopodium quinoa HOM05D006131 ORTHO05D008649 3.0e-14 82.0 75 50.7
HanXRQChr16g0516961 Helianthus annuus HOM05D006131 ORTHO05D008649 3.0e-14 82.0 77 48.1
Lalb_Chr07g0177101 Lupinus albus HOM05D006131 ORTHO05D008649 3.0e-14 82.0 78 44.9
SalBow8G4181 Salvia bowleyana HOM05D006131 ORTHO05D008649 3.0e-14 82.0 76 48.7
TWI38G1228 Tripterygium wilfordii HOM05D006131 ORTHO05D008649 4.0e-14 81.6 75 49.3
Ah.09g234600 Amaranthus hybridus HOM05D006131 ORTHO05D008649 5.2e-14 81.3 75 49.3
FvH4_3g01570 Fragaria vesca HOM05D006131 ORTHO05D008649 5.2e-14 81.3 78 46.2
FAN25G2733 Fragaria x ananassa HOM05D006131 ORTHO05D008649 1.2e-13 80.1 78 44.9
EL10Ac8g20116 Beta vulgaris HOM05D006131 ORTHO05D008649 1.5e-13 79.7 75 49.3
AUR62021912 Chenopodium quinoa HOM05D006131 ORTHO05D008649 1.5e-13 79.7 75 49.3
Lj4g0011530 Lotus japonicus HOM05D006131 ORTHO05D008649 2.0e-13 79.3 78 47.4
TAR627G0028 Trochodendron aralioides HOM05D006131 ORTHO05D008649 2.0e-13 79.3 75 49.3
Nitab4.5_0004743g0060 Nicotiana tabacum HOM05D006131 ORTHO05D008649 3.4e-13 78.6 72 51.4
RcHm_v2.0_Chr5g0002381 Rosa chinensis HOM05D006131 ORTHO05D008649 7.5e-13 77.4 78 46.2
DCAR_028357 Daucus carota HOM05D006131 ORTHO05D008649 8.3e-12 73.9 77 46.8
Cre13.g578451 Chlamydomonas reinhardtii HOM05D006131 ORTHO05D008649 1.4e-11 73.2 75 46.7
PRCOL_00006602 Prasinoderma coloniale HOM05D006131 ORTHO05D008649 2.0e-10 69.3 78 42.3
CSS0007614 Camellia sinensis var. sinensis HOM05D006131 ORTHO05D008649 5.0e-09 64.7 57 49.1
MCO01G222 Micromonas commoda HOM05D006131 ORTHO05D008649 2.5e-08 62.4 77 36.4
AagrBONN_evm.TU.Sc2ySwM_362.2691 Anthoceros agrestis HOM05D006131 ORTHO05D008649 2.1e-07 59.3 48 56.2
Aqoxy144s008 Aquilegia oxysepala HOM05D006131 ORTHO05D077905 2.3e-06 55.8 76 36.8


User provided reference genes

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