Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_08892 Sequoiadendron giganteum HOM05D002784 ORTHO05D003113 6.9e-43 177.2 108 100.0
Nn2g14524 Nelumbo nucifera HOM05D002784 ORTHO05D003113 4.4e-13 78.2 51 70.6
RcHm_v2.0_Chr1g0331471 Rosa chinensis HOM05D002784 ORTHO05D003113 4.4e-13 78.2 51 70.6
Glyma.15G215900 Glycine max HOM05D002784 ORTHO05D003113 7.4e-13 77.4 51 70.6
Manes.10G072400 Manihot esculenta HOM05D002784 ORTHO05D003113 7.4e-13 77.4 51 70.6
Zm00001eb218390 Zea mays HOM05D002784 ORTHO05D003113 7.4e-13 77.4 51 64.7
Duzib114G0326 Durio zibethinus HOM05D002784 ORTHO05D003113 1.7e-12 76.3 51 70.6
MD02G1262200 Malus domestica HOM05D002784 ORTHO05D003113 1.7e-12 76.3 51 70.6
Prupe.2G064200 Prunus persica HOM05D002784 ORTHO05D003113 1.7e-12 76.3 51 70.6
arahy.Tifrunner.gnm1.ann1.0A1ABD Arachis hypogaea HOM05D002784 ORTHO05D003113 2.2e-12 75.9 51 68.6
Medtr8g044240 Medicago truncatula HOM05D002784 ORTHO05D003113 2.2e-12 75.9 51 66.7
Psat7g067120 Pisum sativum HOM05D002784 ORTHO05D003113 2.2e-12 75.9 51 66.7
TPR.G14604 Trifolium pratense HOM05D002784 ORTHO05D003113 2.2e-12 75.9 51 66.7
Nitab4.5_0000087g0160 Nicotiana tabacum HOM05D002784 ORTHO05D003113 2.8e-12 75.5 51 68.6
VMungo1127G0070 Vigna mungo HOM05D002784 ORTHO05D003113 2.8e-12 75.5 51 68.6
GSVIVG01010106001 Vitis vinifera HOM05D002784 ORTHO05D003113 3.7e-12 75.1 51 68.6
Ca_24135_v3 Cicer arietinum L. HOM05D002784 ORTHO05D003113 4.8e-12 74.7 51 64.7
Gohir.A10G194300 Gossypium hirsutum HOM05D002784 ORTHO05D003113 4.8e-12 74.7 51 68.6
Gohir.D10G201400 Gossypium hirsutum HOM05D002784 ORTHO05D003113 4.8e-12 74.7 51 68.6
Gorai.011G226100 Gossypium raimondii HOM05D002784 ORTHO05D003113 4.8e-12 74.7 51 68.6
Thecc.10G126200 Theobroma cacao HOM05D002784 ORTHO05D003113 4.8e-12 74.7 51 68.6
Lsat_1_v5_gn_4_26300 Lactuca sativa HOM05D002784 ORTHO05D003113 6.3e-12 74.3 51 66.7
Phvul.011G185400 Phaseolus vulgaris HOM05D002784 ORTHO05D003113 6.3e-12 74.3 51 66.7
TWI38G1957 Tripterygium wilfordii HOM05D002784 ORTHO05D003113 6.3e-12 74.3 51 68.6
ClCG08G008480 Citrullus lanatus HOM05D002784 ORTHO05D003113 8.2e-12 73.9 51 66.7
Lalb_Chr03g0032311 Lupinus albus HOM05D002784 ORTHO05D003113 8.2e-12 73.9 51 66.7
Os03g0654600 Oryza sativa ssp. japonica HOM05D002784 ORTHO05D003113 1.1e-11 73.6 51 62.7
CsaV3_6G004470 Cucumis sativus L. HOM05D002784 ORTHO05D003113 1.4e-11 73.2 51 66.7
PSO063G3478 Papaver somniferum HOM05D002784 ORTHO05D003113 1.4e-11 73.2 51 66.7
PSO339G5144 Papaver somniferum HOM05D002784 ORTHO05D003113 1.4e-11 73.2 51 66.7
Potri.008G014200 Populus trichocarpa HOM05D002784 ORTHO05D003113 1.4e-11 73.2 51 66.7
CARHR208360 Cardamine hirsuta HOM05D002784 ORTHO05D003113 1.8e-11 72.8 51 64.7
Cc02_g32140 Coffea canephora HOM05D002784 ORTHO05D003113 1.8e-11 72.8 50 66.0
Sed0008596 Sechium edule HOM05D002784 ORTHO05D003113 1.8e-11 72.8 51 64.7
ECA234G1268 Erigeron canadensis HOM05D000017 ORTHO05D003113 2.4e-11 72.4 51 64.7
Eucgr.G02650 Eucalyptus grandis HOM05D002784 ORTHO05D003113 2.4e-11 72.4 51 64.7
Solyc05g032660.4 Solanum lycopersicum HOM05D002784 ORTHO05D003113 2.4e-11 72.4 51 66.7
Sopen05g023370 Solanum pennellii HOM05D002784 ORTHO05D003113 2.4e-11 72.4 51 66.7
CANSAT56G2713 Cannabis sativa HOM05D002784 ORTHO05D003113 3.1e-11 72.0 51 66.7
QL04p049939 Quercus lobata HOM05D002784 ORTHO05D003113 3.1e-11 72.0 50 64.0
Lj3g0000082 Lotus japonicus HOM05D002784 ORTHO05D003113 4.1e-11 71.6 51 62.7
Sc20g0001060 Simmondsia chinensis HOM05D002784 ORTHO05D003113 4.1e-11 71.6 51 68.6
AL6G14590 Arabidopsis lyrata HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
AT5G04900 Arabidopsis thaliana HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
BcaB01g05922 Brassica carinata HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
A03p01920 Brassica napus HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
C03p02290 Brassica napus HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
BolC3t12780H Brassica oleracea HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
BraA03t09562Z Brassica rapa HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
CSS0015127 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 66.7
AUR62014298 Chenopodium quinoa HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 66.7
Migut.O00433 Erythranthe guttata HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 64.7
Thhalv10013856m.g Eutrema salsugineum HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 62.7
FAN01G0373 Fragaria x ananassa HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 64.7
Hund22255 Selenicereus undatus HOM05D002784 ORTHO05D003113 5.3e-11 71.2 51 64.7
Migut.N01882 Erythranthe guttata HOM05D002784 ORTHO05D003113 7.0e-11 70.9 51 64.7
HanXRQChr16g0526711 Helianthus annuus HOM05D002784 ORTHO05D003113 7.0e-11 70.9 51 62.7
Mapoly0054s0037 Marchantia polymorpha HOM05D002784 ORTHO05D003113 9.1e-11 70.5 50 72.0
CiPaw.13G046600 Carya illinoinensis HOM05D002784 ORTHO05D003113 1.2e-10 70.1 51 64.7
HPP92_001902 Vanilla planifolia HOM05D002784 ORTHO05D003113 1.2e-10 70.1 50 66.0
CSS0031926 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 1.6e-10 69.7 51 64.7
Ciclev10016279m.g Citrus clementina HOM05D002784 ORTHO05D003113 1.6e-10 69.7 51 62.7
DCAR_006630 Daucus carota HOM05D002784 ORTHO05D003113 1.6e-10 69.7 51 60.8
THA.LOC104816482 Tarenaya hassleriana HOM05D002784 ORTHO05D003113 1.6e-10 69.7 51 60.8
Aa31LG11G5800 Aethionema arabicum HOM05D002784 ORTHO05D003113 2.6e-10 68.9 51 62.7
Carub.0006s0384 Capsella rubella HOM05D002784 ORTHO05D003113 2.6e-10 68.9 51 62.7
Pp3c21_16710 Physcomitrium patens HOM05D002784 ORTHO05D003113 3.5e-10 68.6 51 64.7
EL10Ac4g08762 Beta vulgaris HOM05D002784 ORTHO05D003113 4.5e-10 68.2 51 60.8
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 7.7e-10 67.4 51 64.7
unitig_21.g20046 Utricularia gibba HOM05D002784 ORTHO05D003113 7.7e-10 67.4 51 64.7
ATR0733G079 Amborella trichopoda HOM05D002784 ORTHO05D003113 2.9e-09 65.5 51 62.7
AagrBONN_evm.TU.Sc2ySwM_228.4370 Anthoceros agrestis HOM05D002784 ORTHO05D003113 2.9e-09 65.5 50 62.0
SGA_v2.0_scaffold196G40984 Striga asiatica HOM05D002784 ORTHO05D003113 8.5e-09 63.9 63 55.6
Carub.0010s0005 Capsella rubella HOM05D002784 ORTHO05D003113 7.2e-08 60.8 51 56.9
CBR_g30763 Chara braunii HOM05D002784 ORTHO05D003113 7.2e-08 60.8 50 58.0
vmacro08592 Vaccinium macrocarpon HOM05D002784 ORTHO05D003113 4.0e-06 55.1 35 71.4
Atru.chr12.1171 Acer truncatum HOM05D002784 ORTHO05D003113 5.2e-06 54.7 35 68.6
MBI11_g23648_MAGBIO Magnolia biondii HOM05D002784 ORTHO05D003113 5.2e-06 54.7 35 68.6
FAN06G0484 Fragaria x ananassa HOM05D002784 ORTHO05D003113 6.7e-06 54.3 35 68.6
FAN10G2198 Fragaria x ananassa HOM05D002784 ORTHO05D003113 6.7e-06 54.3 35 68.6


User provided reference genes

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