Gene: Sopen05g023370

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g023370
  • Transcript Identifier Sopen05g023370.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 55613681-55635228 : negative

Gene Family Information

  • ID HOM05D002784
  • #Genes/#Species 248/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g023370.1

Descriptions

  • Description Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II). | NYC1-like (NOL) | FUNCTIONS IN: oxidoreductase activity, chlorophyll(ide) b reductase activity | INVOLVED IN: chlorophyll catabolic process, PSII associated light-harvesting complex II catabolic process | LOCATED IN: chloroplast | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site , NAD(P)-binding domain , Glucose/ribitol dehydrogenase , Short-chain dehydrogenase/reductase SDR | BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010304
ISO
PLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic process AT5G04900
GO:0015996
ISO
PLAZA Integrative Orthologychlorophyll catabolic process AT5G04900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04900
GO:0034256
ISO
PLAZA Integrative Orthologychlorophyll(ide) b reductase activity AT5G04900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G04900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002347 Short-chain dehydrogenase/reductase SDR
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
7.13.2.4.2 Coenzyme metabolism.chlorophyll metabolism.chlorophyll catabolism.chlorophyll b reductase complex.component NOL