Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07875 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 4.8e-123 444.5 225 100.0
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 9.9e-60 234.2 214 57.0
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 1.3e-59 233.8 192 60.9
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 2.2e-59 233.0 219 58.4
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 2.2e-59 233.0 214 57.5
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 2.2e-59 233.0 214 57.5
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 3.8e-59 232.3 204 59.3
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 4.9e-59 231.9 214 56.5
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 6.4e-59 231.5 212 58.0
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 8.4e-59 231.1 196 60.7
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 8.4e-59 231.1 196 61.7
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 8.4e-59 231.1 212 58.0
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 8.4e-59 231.1 211 57.3
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 1.1e-58 230.7 194 61.3
Ciclev10002140m.g Citrus clementina HOM05D005018 ORTHO05D006786 1.1e-58 230.7 219 54.8
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 1.4e-58 230.3 209 58.4
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 1.4e-58 230.3 209 58.4
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 1.9e-58 229.9 196 58.7
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 1.9e-58 229.9 193 61.7
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 1.9e-58 229.9 193 61.7
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 2.4e-58 229.6 202 58.4
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.4e-58 229.6 219 58.0
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 2.4e-58 229.6 215 55.3
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 2.4e-58 229.6 196 59.7
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 3.2e-58 229.2 219 55.3
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 3.2e-58 229.2 204 59.3
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 5.4e-58 228.4 202 58.9
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 5.4e-58 228.4 196 59.7
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 7.1e-58 228.0 214 56.1
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 7.1e-58 228.0 217 56.2
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 9.3e-58 227.6 204 59.8
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 9.3e-58 227.6 204 57.8
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 9.3e-58 227.6 192 62.0
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 9.3e-58 227.6 213 57.7
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 9.3e-58 227.6 215 56.7
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 9.3e-58 227.6 214 55.6
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 1.2e-57 227.3 214 55.1
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 1.2e-57 227.3 214 55.1
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 1.2e-57 227.3 214 55.1
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 1.6e-57 226.9 193 61.1
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 1.6e-57 226.9 192 60.9
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 1.6e-57 226.9 211 56.9
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 1.6e-57 226.9 193 61.1
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 2.1e-57 226.5 196 60.2
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 2.1e-57 226.5 214 56.5
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 2.1e-57 226.5 215 55.3
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 2.1e-57 226.5 192 61.5
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 2.7e-57 226.1 193 60.6
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 2.7e-57 226.1 196 58.2
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 3.5e-57 225.7 196 59.7
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 3.5e-57 225.7 204 58.8
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 4.6e-57 225.3 196 59.2
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 4.6e-57 225.3 177 65.5
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 4.6e-57 225.3 219 54.3
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 6.0e-57 224.9 192 59.9
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 6.0e-57 224.9 196 59.2
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 6.0e-57 224.9 202 58.9
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 7.9e-57 224.6 214 55.1
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 7.9e-57 224.6 196 58.2
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 7.9e-57 224.6 196 59.7
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 7.9e-57 224.6 197 58.9
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 7.9e-57 224.6 214 57.5
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 7.9e-57 224.6 201 56.7
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 1.0e-56 224.2 215 56.3
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 1.3e-56 223.8 193 60.1
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 2.3e-56 223.0 177 65.0
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 2.3e-56 223.0 197 58.4
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 3.0e-56 222.6 193 60.6
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 3.0e-56 222.6 197 58.4
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 3.9e-56 222.2 177 65.0
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 3.9e-56 222.2 196 57.7
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 5.1e-56 221.9 197 58.4
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 6.6e-56 221.5 214 54.2
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 6.6e-56 221.5 177 61.6
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 1.1e-55 220.7 194 58.8
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 1.5e-55 220.3 218 51.8
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 1.5e-55 220.3 213 55.9
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 1.9e-55 219.9 177 65.0
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 2.5e-55 219.5 192 58.9
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 2.5e-55 219.5 214 51.4
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.5e-55 219.5 214 57.0
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 4.3e-55 218.8 162 67.3
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 4.3e-55 218.8 196 57.1
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 7.4e-55 218.0 192 57.8
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 1.3e-54 217.2 213 54.0
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 1.6e-54 216.9 208 53.8
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 2.1e-54 216.5 177 60.5
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 2.8e-54 216.1 239 47.3
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 2.8e-54 216.1 163 65.0
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 3.6e-54 215.7 201 56.2
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 3.6e-54 215.7 196 57.7
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 8.1e-54 214.5 201 55.7
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 1.8e-53 213.4 199 55.8
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 4.0e-53 212.2 177 57.1
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 6.9e-53 211.5 196 55.1
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 2.6e-52 209.5 196 54.1
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 3.4e-52 209.1 187 55.6
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 9.9e-52 207.6 210 52.9
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 3.3e-47 192.6 173 54.9
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 1.6e-41 173.7 148 58.8
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 2.7e-41 172.9 188 49.5
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 6.5e-35 151.8 112 68.8
Haze_25310 Corylus avellana HOM05D005018 ORTHO05D006786 2.5e-34 149.8 144 52.1
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 3.5e-33 146.0 191 41.9
BcaC07g37734 Brassica carinata HOM05D005018 ORTHO05D006786 4.6e-33 145.6 158 48.7
BolC8t48115H Brassica oleracea HOM05D005018 ORTHO05D006786 4.6e-33 145.6 158 48.7
Zm00001eb292630 Zea mays HOM05D005018 ORTHO05D006786 2.9e-27 126.3 98 65.3
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.9e-26 123.6 174 43.1
SEGI_27054 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 1.6e-25 120.6 62 93.5
Zm00001eb074000 Zea mays HOM05D005018 ORTHO05D006786 1.4e-24 117.5 94 64.9
SEGI_36031 Sequoiadendron giganteum HOM05D006037 ORTHO05D007384 8.8e-24 114.8 58 94.8
SEGI_18671 Sequoiadendron giganteum HOM05D002049 ORTHO05D002432 1.1e-23 114.4 57 96.5
SEGI_28492 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 1.1e-23 114.4 57 96.5
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 3.6e-17 92.8 59 79.7
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 1.0e-16 91.3 57 77.2
Haze_25306 Corylus avellana HOM05D005018 ORTHO05D000965 1.0e-16 91.3 57 78.9
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 3.0e-16 89.7 60 75.0
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 3.0e-16 89.7 57 77.2
SEGI_19116 Sequoiadendron giganteum HOM05D004962 ORTHO05D006249 2.0e-15 87.0 44 95.5
Haze_18329 Corylus avellana HOM05D001982 ORTHO05D008035 1.6e-12 77.4 63 54.0
Cpa.g.sc1441.1 Carica papaya HOM05D005018 ORTHO05D006786 3.5e-12 76.3 52 71.2
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 3.6e-09 66.2 164 28.7
Haze_18314 Corylus avellana HOM05D005018 ORTHO05D006786 1.4e-08 64.3 136 29.4
SEGI_33979 Sequoiadendron giganteum HOM05D000166 ORTHO05D002123 8.8e-08 61.6 38 78.9
Ah.06g190940 Amaranthus hybridus HOM05D005018 ORTHO05D006786 7.5e-07 58.5 77 39.0
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 2.2e-06 57.0 184 28.3
CDE08G0903 Ceratophyllum demersum HOM05D005018 ORTHO05D006786 3.7e-06 56.2 67 41.8
Cpa.g.sc1441.2 Carica papaya HOM05D005018 ORTHO05D006786 8.2e-06 55.1 80 36.2


User provided reference genes

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