Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.9e-218 761.5 370 100.0
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 5.5e-124 448.4 280 73.6
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 4.7e-123 445.3 293 70.3
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 3.9e-122 442.2 280 74.3
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 2.0e-121 439.9 281 71.5
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 2.0e-121 439.9 281 73.3
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 2.0e-121 439.9 280 73.6
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 9.7e-121 437.6 281 72.6
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 2.2e-120 436.4 281 72.6
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 3.7e-120 435.6 282 72.7
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 4.8e-120 435.3 280 73.6
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 8.2e-120 434.5 281 72.6
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.4e-119 433.7 291 69.4
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 2.4e-119 433.0 297 70.0
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 3.1e-119 432.6 282 72.3
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 4.1e-119 432.2 293 70.0
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 4.1e-119 432.2 281 71.2
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 5.3e-119 431.8 282 69.9
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 5.3e-119 431.8 282 72.7
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 5.3e-119 431.8 281 70.5
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 5.3e-119 431.8 281 71.5
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 1.5e-118 430.3 281 71.2
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 2.0e-118 429.9 281 70.5
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 2.6e-118 429.5 285 70.9
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 2.6e-118 429.5 281 70.1
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 3.5e-118 429.1 281 73.0
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 4.5e-118 428.7 282 71.3
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 5.9e-118 428.3 285 71.6
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 5.9e-118 428.3 282 69.9
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 7.7e-118 427.9 281 70.5
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 1.3e-117 427.2 283 70.0
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 1.7e-117 426.8 280 72.5
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 2.9e-117 426.0 281 69.8
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 2.9e-117 426.0 281 70.5
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.9e-117 426.0 281 70.8
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 2.9e-117 426.0 281 69.8
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 3.8e-117 425.6 281 70.8
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 5.0e-117 425.2 281 70.8
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 5.0e-117 425.2 280 70.7
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 5.0e-117 425.2 280 72.5
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 6.5e-117 424.9 283 70.7
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 1.1e-116 424.1 281 70.1
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 1.5e-116 423.7 283 69.6
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 1.9e-116 423.3 281 71.2
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 1.9e-116 423.3 281 70.5
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 1.9e-116 423.3 292 66.8
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 1.9e-116 423.3 281 69.0
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 4.2e-116 422.2 280 71.1
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 5.5e-116 421.8 281 71.2
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 7.2e-116 421.4 285 69.1
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 7.2e-116 421.4 280 71.1
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 9.4e-116 421.0 283 71.0
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 1.2e-115 420.6 283 70.3
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 1.6e-115 420.2 283 68.6
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 2.7e-115 419.5 281 69.0
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 4.7e-115 418.7 281 69.0
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 8.0e-115 417.9 291 67.4
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 8.0e-115 417.9 281 68.0
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 1.4e-114 417.2 297 68.4
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 1.4e-114 417.2 282 69.5
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 1.4e-114 417.2 282 69.1
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 3.9e-114 415.6 292 66.4
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 3.9e-114 415.6 303 66.3
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 6.7e-114 414.8 292 65.4
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 6.7e-114 414.8 292 65.1
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 8.8e-114 414.5 292 65.1
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 1.1e-113 414.1 282 68.8
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.1e-113 414.1 283 67.5
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 2.6e-113 412.9 292 65.4
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 2.6e-113 412.9 292 65.1
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 3.3e-113 412.5 283 68.6
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 4.4e-113 412.1 292 64.0
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 4.4e-113 412.1 281 68.0
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 9.7e-113 411.0 317 63.1
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 2.2e-112 409.8 280 69.6
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 2.8e-112 409.5 283 66.8
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 1.8e-111 406.8 283 66.8
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 4.1e-111 405.6 281 65.8
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 9.1e-111 404.4 281 67.3
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 1.6e-110 403.7 282 66.0
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 2.0e-110 403.3 288 64.6
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 2.0e-110 403.3 299 63.9
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 3.5e-110 402.5 280 67.1
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 5.9e-110 401.7 266 70.7
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 3.8e-109 399.1 288 68.4
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 5.0e-109 398.7 262 70.6
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 8.5e-109 397.9 281 64.8
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 3.2e-108 396.0 280 64.3
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 6.1e-107 391.7 295 63.7
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 1.8e-106 390.2 289 64.7
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 4.4e-105 385.6 277 66.4
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 4.8e-104 382.1 270 65.9
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 3.1e-103 379.4 292 63.0
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 3.5e-102 375.9 301 62.8
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 1.0e-101 374.4 280 63.6
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 1.7e-101 373.6 287 63.8
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 2.2e-101 373.2 265 66.0
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 3.8e-101 372.5 263 66.5
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 1.6e-99 367.1 301 61.1
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 8.8e-98 361.3 238 71.0
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 1.5e-97 360.5 255 66.7
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 4.5e-94 349.0 225 69.8
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 4.1e-87 325.9 283 55.5
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 2.7e-86 323.2 288 55.6
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.5e-86 322.8 282 59.2
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 5.9e-86 322.0 251 62.5
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.8e-82 310.5 224 64.7
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.7e-80 303.9 249 59.0
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 8.9e-74 281.6 293 50.9
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 2.0e-73 280.4 261 53.3
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 9.5e-68 261.5 285 49.1
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 6.8e-66 255.4 146 80.8
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 2.7e-62 243.4 287 45.3
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 3.7e-35 153.3 86 77.9
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 4.5e-33 146.4 300 36.3
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 9.3e-31 138.7 93 66.7
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 2.3e-29 134.0 128 57.0
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.9e-23 114.4 55 92.7
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 1.1e-15 88.6 131 38.9
SEGI_15286 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.3e-13 80.9 86 52.3
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 2.5e-12 77.4 52 71.2
SEGI_24655 Sequoiadendron giganteum HOM05D000524 ORTHO05D000381 2.5e-12 77.4 79 54.4
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 2.4e-10 70.9 134 35.8


User provided reference genes

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