Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 3.8e-57 224.6 108 100.0
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 5.3e-19 97.8 111 51.4
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 1.2e-18 96.7 90 57.8
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 2.0e-18 95.9 89 58.4
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 2.6e-18 95.5 89 56.2
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 3.4e-18 95.1 83 61.4
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 1.0e-17 93.6 80 60.0
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 1.0e-17 93.6 111 48.6
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.0e-17 93.6 115 47.0
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.7e-17 92.8 94 56.4
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 1.7e-17 92.8 100 51.0
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 2.2e-17 92.4 89 56.2
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 2.2e-17 92.4 92 53.3
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 2.9e-17 92.0 99 48.5
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 3.8e-17 91.7 77 63.6
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 8.5e-17 90.5 80 61.2
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 8.5e-17 90.5 80 58.8
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 8.5e-17 90.5 106 50.0
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 1.4e-16 89.7 112 47.3
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.9e-16 89.4 106 50.0
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 1.9e-16 89.4 89 55.1
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.9e-16 89.4 89 55.1
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.9e-16 89.4 89 55.1
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.9e-16 89.4 89 55.1
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 2.5e-16 89.0 89 53.9
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 4.2e-16 88.2 77 61.0
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 7.2e-16 87.4 82 58.5
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 7.2e-16 87.4 93 50.5
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 9.4e-16 87.0 77 62.3
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 9.4e-16 87.0 83 56.6
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 9.4e-16 87.0 89 51.7
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 1.2e-15 86.7 96 51.0
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.2e-15 86.7 93 50.5
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 1.6e-15 86.3 87 51.7
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 1.6e-15 86.3 81 56.8
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.6e-15 86.3 86 53.5
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 1.6e-15 86.3 86 53.5
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 1.6e-15 86.3 86 53.5
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.1e-15 85.9 94 51.1
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 2.1e-15 85.9 90 50.0
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 2.1e-15 85.9 96 50.0
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 2.7e-15 85.5 91 50.5
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.7e-15 85.5 82 57.3
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 2.7e-15 85.5 77 59.7
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 2.7e-15 85.5 116 47.4
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 2.7e-15 85.5 81 56.8
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 2.7e-15 85.5 94 48.9
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 3.6e-15 85.1 87 51.7
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 3.6e-15 85.1 89 52.8
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 4.7e-15 84.7 113 46.0
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 4.7e-15 84.7 106 47.2
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 4.7e-15 84.7 90 52.2
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 6.1e-15 84.3 92 51.1
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 6.1e-15 84.3 78 59.0
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 6.1e-15 84.3 77 58.4
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 6.1e-15 84.3 89 52.8
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 6.1e-15 84.3 80 56.2
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 8.0e-15 84.0 86 53.5
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 8.0e-15 84.0 77 58.4
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 8.0e-15 84.0 94 50.0
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.0e-14 83.6 87 56.3
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 1.0e-14 83.6 110 46.4
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 1.0e-14 83.6 77 57.1
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 1.0e-14 83.6 113 44.2
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 1.4e-14 83.2 89 50.6
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 1.4e-14 83.2 93 51.6
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 1.8e-14 82.8 91 51.6
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 2.3e-14 82.4 104 47.1
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 3.0e-14 82.0 110 43.6
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 3.0e-14 82.0 115 46.1
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 3.0e-14 82.0 115 46.1
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 3.9e-14 81.6 77 55.8
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 3.9e-14 81.6 89 49.4
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 3.9e-14 81.6 83 56.6
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 5.2e-14 81.3 82 53.7
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 5.2e-14 81.3 80 51.2
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 5.2e-14 81.3 80 53.8
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 8.8e-14 80.5 76 57.9
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 8.8e-14 80.5 83 53.0
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 8.8e-14 80.5 83 53.0
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 8.8e-14 80.5 87 51.7
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 8.8e-14 80.5 89 49.4
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 1.1e-13 80.1 98 45.9
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 1.1e-13 80.1 86 48.8
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 1.1e-13 80.1 83 55.4
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 1.1e-13 80.1 87 50.6
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 1.5e-13 79.7 78 55.1
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 1.5e-13 79.7 77 57.1
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 2.0e-13 79.3 87 51.7
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 2.6e-13 79.0 115 46.1
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 2.6e-13 79.0 79 54.4
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 2.6e-13 79.0 101 48.5
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 3.3e-13 78.6 98 44.9
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 3.3e-13 78.6 87 50.6
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 3.3e-13 78.6 87 50.6
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 4.4e-13 78.2 87 49.4
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 4.4e-13 78.2 87 49.4
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 5.7e-13 77.8 78 52.6
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 5.7e-13 77.8 99 42.4
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 9.7e-13 77.0 87 51.7
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 2.8e-12 75.5 87 51.7
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 2.8e-12 75.5 89 46.1
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 2.8e-12 75.5 81 49.4
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 3.7e-12 75.1 83 53.0
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 3.7e-12 75.1 83 53.0
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 5.3e-11 71.2 64 51.6
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 5.3e-11 71.2 80 50.0
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 7.0e-11 70.9 87 48.3
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 2.0e-10 69.3 77 48.1
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 3.5e-10 68.6 75 45.3
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.9e-10 67.8 120 34.2
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 2.9e-09 65.5 114 36.8
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.0e-09 64.7 99 40.4
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 5.0e-09 64.7 99 40.4
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.1e-08 63.5 125 33.6
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 2.5e-08 62.4 66 50.0
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 2.5e-08 62.4 77 42.9
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 9.4e-08 60.5 67 46.3
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 6.1e-07 57.8 61 54.1
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 6.1e-07 57.8 61 52.5
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 2.3e-06 55.8 92 33.7
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 8.8e-06 53.9 63 52.4


User provided reference genes

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