Gene: PSO170G5162
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO170G5162
- Transcript Identifier PSO170G5162.01
- Gene Type Coding gene
- Location NC_039360.1 : 22212580-22216375 : negative
Gene Family Information
- ID HOM05D005817
- #Genes/#Species 134/95
- Phylogenetic origin
- ID ORTHO05D007140
- #Genes/#Species 134/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026598397.1
- pid XP_026454182.1
- id gene-LOC113355525
Descriptions
- product survival of motor neuron-related-splicing factor 30-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | ISO | PLAZA Integrative Orthology | mRNA processing | AT2G02570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D005817 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Homology (enrichment) | nucleus | HOM05D005817 |
| GO:0005737 | ISO | PLAZA Homology (enrichment) | cytoplasm | HOM05D005817 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002999 | Tudor domain |
| Mapman id | Description |
|---|---|
| 16.2.1.2.6 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SPF30) |