Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.6e-110 402.9 223 100.0
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 5.1e-32 142.1 100 67.0
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 2.4e-29 133.3 93 72.0
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 1.3e-27 127.5 129 53.5
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 2.2e-27 126.7 107 62.6
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 1.9e-26 123.6 95 61.1
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 5.4e-26 122.1 98 61.2
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 9.3e-26 121.3 99 59.6
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 1.2e-25 120.9 102 60.8
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 1.2e-25 120.9 103 56.3
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 1.6e-25 120.6 93 62.4
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 3.5e-25 119.4 97 61.9
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 3.5e-25 119.4 99 58.6
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 4.6e-25 119.0 108 55.6
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.0e-24 117.9 97 59.8
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 1.8e-24 117.1 99 58.6
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 1.8e-24 117.1 116 51.7
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 1.8e-24 117.1 103 57.3
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 2.3e-24 116.7 103 55.3
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 2.3e-24 116.7 94 60.6
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 3.9e-24 115.9 123 48.8
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 5.1e-24 115.5 103 56.3
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 5.1e-24 115.5 94 59.6
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 6.7e-24 115.2 103 56.3
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 6.7e-24 115.2 94 61.7
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 8.7e-24 114.8 103 53.4
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 8.7e-24 114.8 95 60.0
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 1.1e-23 114.4 103 56.3
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 1.1e-23 114.4 97 60.8
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 1.1e-23 114.4 94 59.6
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 1.1e-23 114.4 99 59.6
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 1.5e-23 114.0 105 55.2
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 1.5e-23 114.0 94 57.4
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 1.5e-23 114.0 103 57.3
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 1.5e-23 114.0 102 58.8
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 1.9e-23 113.6 103 58.3
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 1.9e-23 113.6 98 59.2
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 1.9e-23 113.6 108 51.9
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 2.5e-23 113.2 95 60.0
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 2.5e-23 113.2 97 58.8
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 2.5e-23 113.2 102 56.9
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 2.5e-23 113.2 102 55.9
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 2.5e-23 113.2 93 59.1
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 2.5e-23 113.2 103 58.3
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 4.3e-23 112.5 97 58.8
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 5.6e-23 112.1 108 52.8
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 5.6e-23 112.1 140 48.6
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 7.4e-23 111.7 102 55.9
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 7.4e-23 111.7 101 58.4
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 7.4e-23 111.7 94 56.4
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 7.4e-23 111.7 94 56.4
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 1.3e-22 110.9 103 54.4
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 1.3e-22 110.9 103 53.4
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 1.3e-22 110.9 94 55.3
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.3e-22 110.9 97 57.7
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 1.3e-22 110.9 94 59.6
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 1.6e-22 110.5 97 55.7
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 1.6e-22 110.5 97 55.7
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 1.6e-22 110.5 97 57.7
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 1.6e-22 110.5 97 57.7
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 1.6e-22 110.5 102 55.9
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 2.1e-22 110.2 97 55.7
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 2.1e-22 110.2 101 56.4
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 2.8e-22 109.8 97 55.7
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 2.8e-22 109.8 98 57.1
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 2.8e-22 109.8 100 55.0
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 3.6e-22 109.4 103 55.3
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 3.6e-22 109.4 94 56.4
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 3.6e-22 109.4 96 56.2
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 4.8e-22 109.0 94 57.4
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 4.8e-22 109.0 102 53.9
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 6.2e-22 108.6 92 58.7
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 6.2e-22 108.6 92 59.8
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 8.1e-22 108.2 102 53.9
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 8.1e-22 108.2 107 54.2
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 8.1e-22 108.2 94 57.4
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 8.1e-22 108.2 103 56.3
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 8.1e-22 108.2 100 54.0
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 8.1e-22 108.2 103 53.4
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 8.1e-22 108.2 103 54.4
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 8.1e-22 108.2 97 57.7
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 8.1e-22 108.2 128 48.4
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 1.1e-21 107.8 106 51.9
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 1.4e-21 107.5 86 59.3
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 1.4e-21 107.5 100 56.0
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 1.4e-21 107.5 97 53.6
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 1.8e-21 107.1 102 54.9
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 3.1e-21 106.3 95 64.2
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 4.0e-21 105.9 94 56.4
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 5.3e-21 105.5 87 58.6
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 5.3e-21 105.5 98 56.1
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 6.9e-21 105.1 100 52.0
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 6.9e-21 105.1 100 54.0
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 9.0e-21 104.8 81 63.0
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 2.0e-20 103.6 103 54.4
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 2.6e-20 103.2 75 61.3
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 2.6e-20 103.2 93 59.1
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 1.3e-19 100.9 103 55.3
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 3.2e-18 96.3 75 58.7
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 7.1e-18 95.1 90 58.9
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 1.2e-17 94.4 88 51.1
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 5.1e-16 89.0 75 54.7
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 1.1e-15 87.8 71 60.6
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 1.3e-14 84.3 93 46.2
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.7e-14 82.8 71 59.2
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 4.0e-13 79.3 119 43.7
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 9.0e-13 78.2 113 44.2
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 1.0e-11 74.7 69 53.6
SEGI_15569 Sequoiadendron giganteum HOM05D001792 ORTHO05D001821 1.4e-10 70.9 53 62.3
SEGI_31962 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.4e-10 70.9 53 62.3
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 1.9e-10 70.5 47 63.8
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 1.9e-10 70.5 68 47.1
SEGI_33787 Sequoiadendron giganteum HOM05D005218 ORTHO05D006657 2.5e-10 70.1 41 75.6
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.2e-10 69.7 68 51.5
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 3.2e-10 69.7 61 59.0
SEGI_36376 Sequoiadendron giganteum HOM05D009239 ORTHO05D006039 5.5e-10 68.9 58 62.1
SEGI_18581 Sequoiadendron giganteum HOM05D000104 ORTHO05D006311 9.3e-10 68.2 46 67.4
SEGI_28364 Sequoiadendron giganteum HOM05D000032 ORTHO05D004701 9.3e-10 68.2 51 66.7
SEGI_30707 Sequoiadendron giganteum HOM05D005332 ORTHO05D006861 1.6e-09 67.4 42 69.0
SEGI_28899 Sequoiadendron giganteum HOM05D000181 ORTHO05D007950 2.7e-09 66.6 38 78.9
SEGI_39805 Sequoiadendron giganteum HOM05D013418 ORTHO05D014789 4.6e-09 65.9 50 58.0
SEGI_39373 Sequoiadendron giganteum HOM05D000031 ORTHO05D012700 7.9e-09 65.1 95 46.3
SEGI_03139 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 1.3e-08 64.3 47 63.8
SEGI_22621 Sequoiadendron giganteum HOM05D002347 ORTHO05D014789 1.3e-08 64.3 57 54.4
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 3.0e-08 63.2 100 41.0
SEGI_29889 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 3.0e-08 63.2 40 67.5
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 3.9e-08 62.8 43 60.5
SEGI_16573 Sequoiadendron giganteum HOM05D000239 ORTHO05D000484 5.1e-08 62.4 60 46.7
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 5.1e-08 62.4 40 65.0
SEGI_30407 Sequoiadendron giganteum HOM05D004758 ORTHO05D006063 6.7e-08 62.0 36 83.3
SEGI_30504 Sequoiadendron giganteum HOM05D004344 ORTHO05D006026 1.5e-07 60.8 39 64.1
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 2.5e-07 60.1 40 62.5
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.5e-07 60.1 39 64.1
SEGI_20291 Sequoiadendron giganteum HOM05D000089 ORTHO05D000104 7.4e-07 58.5 39 61.5
SEGI_39138 Sequoiadendron giganteum HOM05D003285 ORTHO05D003740 9.6e-07 58.2 50 54.0
SEGI_08556 Sequoiadendron giganteum HOM05D009239 ORTHO05D017074 1.3e-06 57.8 38 63.2
SEGI_26035 Sequoiadendron giganteum HOM05D006807 ORTHO05D008528 1.3e-06 57.8 43 55.8
SEGI_10741 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 1.6e-06 57.4 43 55.8
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 2.1e-06 57.0 43 58.1
SEGI_17147 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 3.7e-06 56.2 37 62.2


User provided reference genes

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