Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 4.2e-83 311.2 147 100.0
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 5.3e-62 241.1 162 70.4
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 2.6e-61 238.8 162 69.1
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 3.4e-61 238.4 166 66.9
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 7.6e-61 237.3 162 68.5
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 1.7e-60 236.1 168 65.5
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 2.2e-60 235.7 162 68.5
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 2.9e-60 235.3 162 67.9
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.9e-60 235.3 166 66.9
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 2.9e-60 235.3 168 64.9
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 3.8e-60 235.0 162 68.5
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 3.8e-60 235.0 162 67.9
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 5.0e-60 234.6 162 69.1
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 6.5e-60 234.2 162 67.9
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 6.5e-60 234.2 162 67.9
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 8.5e-60 233.8 161 68.9
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 1.1e-59 233.4 162 66.7
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 1.1e-59 233.4 162 67.3
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 1.4e-59 233.0 166 66.3
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 1.4e-59 233.0 162 68.5
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 1.9e-59 232.6 162 67.9
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 1.9e-59 232.6 162 66.7
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 1.9e-59 232.6 162 66.0
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 2.5e-59 232.3 162 66.0
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 2.5e-59 232.3 166 65.7
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 2.5e-59 232.3 162 67.3
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.5e-59 232.3 162 67.3
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 2.5e-59 232.3 162 67.3
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 3.2e-59 231.9 162 66.7
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 4.2e-59 231.5 162 67.3
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 4.2e-59 231.5 162 67.3
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 4.2e-59 231.5 162 67.3
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 4.2e-59 231.5 162 67.3
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 4.2e-59 231.5 162 67.3
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 5.5e-59 231.1 162 66.7
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 9.4e-59 230.3 162 66.7
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 9.4e-59 230.3 162 67.3
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 1.2e-58 229.9 162 66.0
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 1.2e-58 229.9 162 66.7
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 1.2e-58 229.9 166 67.5
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 1.6e-58 229.6 161 67.7
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 2.7e-58 228.8 162 67.3
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 2.7e-58 228.8 162 66.7
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 3.6e-58 228.4 166 65.7
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 3.6e-58 228.4 166 65.7
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 3.6e-58 228.4 162 66.7
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 4.6e-58 228.0 166 64.5
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 4.6e-58 228.0 162 65.4
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 4.6e-58 228.0 162 66.0
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 7.9e-58 227.3 166 64.5
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 7.9e-58 227.3 166 64.5
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 7.9e-58 227.3 166 64.5
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 7.9e-58 227.3 166 64.5
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.0e-57 226.9 166 63.3
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 1.0e-57 226.9 166 63.3
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 1.0e-57 226.9 161 64.6
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 1.0e-57 226.9 162 66.0
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 1.0e-57 226.9 162 66.7
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 1.4e-57 226.5 162 66.0
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 1.4e-57 226.5 162 66.0
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.4e-57 226.5 162 65.4
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 1.4e-57 226.5 161 65.8
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 1.4e-57 226.5 162 66.0
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 1.4e-57 226.5 162 66.0
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.8e-57 226.1 162 66.7
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 1.8e-57 226.1 162 66.0
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 1.8e-57 226.1 166 63.9
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 1.8e-57 226.1 162 66.0
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 2.3e-57 225.7 162 66.0
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 2.3e-57 225.7 162 66.0
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 2.3e-57 225.7 162 65.4
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 3.0e-57 225.3 162 64.8
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 3.0e-57 225.3 166 63.3
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 3.0e-57 225.3 162 64.8
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 3.9e-57 224.9 168 63.1
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 5.1e-57 224.6 162 65.4
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 5.1e-57 224.6 162 65.4
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 5.1e-57 224.6 162 64.8
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 6.7e-57 224.2 162 64.8
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 8.8e-57 223.8 166 62.7
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 8.8e-57 223.8 162 65.4
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 8.8e-57 223.8 166 63.9
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 1.1e-56 223.4 166 63.9
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 1.1e-56 223.4 166 63.9
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 1.1e-56 223.4 166 63.9
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 1.1e-56 223.4 162 64.8
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 1.5e-56 223.0 176 61.9
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 1.9e-56 222.6 166 63.3
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 7.4e-56 220.7 161 65.2
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.7e-55 219.5 162 63.6
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 3.7e-55 218.4 166 61.4
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 1.2e-53 213.4 167 62.3
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 2.6e-53 212.2 195 53.8
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 7.7e-53 210.7 162 60.5
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 1.3e-52 209.9 197 54.8
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 2.5e-51 205.7 162 61.1
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 2.5e-51 205.7 194 54.1
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 2.5e-51 205.7 194 54.1
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 4.7e-50 201.4 162 59.9
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 6.1e-50 201.1 194 53.1
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 7.9e-50 200.7 161 60.9
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 8.8e-49 197.2 223 47.5
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 8.8e-49 197.2 223 47.5
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 2.0e-48 196.1 162 56.8
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 3.8e-44 181.8 151 59.6
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 1.4e-43 179.9 162 57.4
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 5.2e-41 171.4 138 61.6
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 1.8e-38 162.9 251 39.4
vmacro23145 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 5.2e-33 144.8 102 64.7
AUR62000506 Chenopodium quinoa HOM05D005018 ORTHO05D006786 7.2e-27 124.4 63 79.4
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 2.5e-19 99.4 127 46.5
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 4.2e-19 98.6 152 39.5
PGSC0003DMG400006748 Solanum tuberosum HOM05D005018 ORTHO05D006786 1.6e-18 96.7 45 84.4
Zm00001eb140420 Zea mays HOM05D005018 ORTHO05D006786 6.8e-17 91.3 49 75.5
HanXRQChr09g0246051 Helianthus annuus HOM05D005018 ORTHO05D006171 8.9e-17 90.9 49 77.6
Lsat_1_v5_gn_8_7740 Lactuca sativa HOM05D005018 ORTHO05D006786 8.9e-17 90.9 45 80.0
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.0e-16 89.7 91 53.8
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 7.5e-16 87.8 156 35.3
HanXRQChr10g0278491 Helianthus annuus HOM05D005018 ORTHO05D006786 2.2e-15 86.3 50 76.0
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 4.1e-14 82.0 54 72.2
MCO09G386 Micromonas commoda HOM05D005018 ORTHO05D006786 2.3e-12 76.3 166 34.3
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 4.0e-09 65.5 152 32.2
C09p47090 Brassica napus HOM05D036241 ORTHO05D032846 1.7e-07 60.1 39 69.2


User provided reference genes

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