Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06744 Sequoiadendron giganteum HOM05D004419 ORTHO05D005480 4.1e-71 271.2 127 100.0
Lalb_Chr01g0003291 Lupinus albus HOM05D004419 ORTHO05D005480 4.2e-39 164.9 97 73.2
Dinv36300 Davidia involucrata HOM05D004419 ORTHO05D005480 5.4e-39 164.5 97 74.2
CSS0021936 Camellia sinensis var. sinensis HOM05D004419 ORTHO05D005480 1.2e-38 163.3 97 74.2
Actinidia39384 Actinidia chinensis HOM05D004419 ORTHO05D005480 4.6e-38 161.4 97 74.2
Aqoxy2G00106 Aquilegia oxysepala HOM05D004419 ORTHO05D005480 6.0e-38 161.0 97 74.2
arahy.Tifrunner.gnm1.ann1.LD2WL8 Arachis hypogaea HOM05D004419 ORTHO05D005480 1.0e-37 160.2 97 73.2
Haze_23052 Corylus avellana HOM05D004419 ORTHO05D005480 1.8e-37 159.5 96 74.0
Haze_23057 Corylus avellana HOM05D004419 ORTHO05D005480 1.8e-37 159.5 96 74.0
Carub.0003s2077 Capsella rubella HOM05D004419 ORTHO05D005480 2.3e-37 159.1 126 58.7
GSVIVG01025322001 Vitis vinifera HOM05D004419 ORTHO05D005480 2.3e-37 159.1 97 73.2
CiPaw.13G165000 Carya illinoinensis HOM05D004419 ORTHO05D005480 3.9e-37 158.3 97 72.2
Eucgr.J00814 Eucalyptus grandis HOM05D004419 ORTHO05D005480 3.9e-37 158.3 126 58.7
Manes.06G168600 Manihot esculenta HOM05D004419 ORTHO05D005480 3.9e-37 158.3 97 74.2
TAR623G0092 Trochodendron aralioides HOM05D004419 ORTHO05D005480 3.9e-37 158.3 97 72.2
Atru.chr3.2519_Atru.chr3.2520 Acer truncatum HOM05D004419 ORTHO05D005480 8.7e-37 157.1 97 73.2
Ca_20582_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 8.7e-37 157.1 97 71.1
PSO384G0662 Papaver somniferum HOM05D004419 ORTHO05D005480 8.7e-37 157.1 97 71.1
Potri.001G016200 Populus trichocarpa HOM05D004419 ORTHO05D005480 8.7e-37 157.1 111 64.9
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.1e-36 156.8 97 70.1
Cfa009704 Carpinus fangiana HOM05D004419 ORTHO05D005480 1.5e-36 156.4 96 72.9
Psat7g213880 Pisum sativum HOM05D004419 ORTHO05D005480 1.5e-36 156.4 97 69.1
Glyma.12G055000 Glycine max HOM05D004419 ORTHO05D005480 1.9e-36 156.0 111 63.1
MD03G1020700 Malus domestica HOM05D004419 ORTHO05D005480 1.9e-36 156.0 97 71.1
TWI60G0085 Tripterygium wilfordii HOM05D004419 ORTHO05D005480 1.9e-36 156.0 97 72.2
Medtr4g066020 Medicago truncatula HOM05D004419 ORTHO05D005480 3.3e-36 155.2 97 69.1
Phvul.011G056900 Phaseolus vulgaris HOM05D004419 ORTHO05D005480 3.3e-36 155.2 111 62.2
Lalb_Chr19g0138231 Lupinus albus HOM05D004419 ORTHO05D005480 4.3e-36 154.8 96 70.8
THA.LOC104816908 Tarenaya hassleriana HOM05D004419 ORTHO05D005480 4.3e-36 154.8 126 61.1
Nn7g36075 Nelumbo nucifera HOM05D004419 ORTHO05D005480 5.6e-36 154.5 97 72.2
CARHR096660 Cardamine hirsuta HOM05D004419 ORTHO05D005480 9.6e-36 153.7 101 67.3
Duzib168G0032 Durio zibethinus HOM05D004419 ORTHO05D005480 9.6e-36 153.7 97 71.1
Lj3g0003248 Lotus japonicus HOM05D004419 ORTHO05D005480 9.6e-36 153.7 126 57.1
Prupe.6G015700 Prunus persica HOM05D004419 ORTHO05D005480 1.3e-35 153.3 97 70.1
RcHm_v2.0_Chr5g0078171 Rosa chinensis HOM05D004419 ORTHO05D005480 1.3e-35 153.3 97 70.1
AL3G34730 Arabidopsis lyrata HOM05D004419 ORTHO05D005480 2.1e-35 152.5 101 66.3
A05p27970 Brassica napus HOM05D004419 ORTHO05D005480 2.1e-35 152.5 126 55.6
BraA05t21680Z Brassica rapa HOM05D004419 ORTHO05D005480 2.1e-35 152.5 126 55.6
FAN16G1269 Fragaria x ananassa HOM05D004419 ORTHO05D005480 2.1e-35 152.5 97 69.1
Glyma.11G130600 Glycine max HOM05D004419 ORTHO05D005480 2.8e-35 152.1 111 62.2
Gohir.D06G112900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 2.8e-35 152.1 96 70.8
Hma1.2p1_0143F.1_g064490 Hydrangea macrophylla HOM05D004419 ORTHO05D005480 2.8e-35 152.1 97 68.0
Thecc.09G224700 Theobroma cacao HOM05D004419 ORTHO05D005480 2.8e-35 152.1 97 71.1
FAN21G0217 Fragaria x ananassa HOM05D004419 ORTHO05D005480 3.7e-35 151.8 97 69.1
AT3G20810 Arabidopsis thaliana HOM05D004419 ORTHO05D005480 4.8e-35 151.4 97 67.0
Gohir.A06G108900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 4.8e-35 151.4 97 69.1
Gorai.010G128800 Gossypium raimondii HOM05D004419 ORTHO05D005480 4.8e-35 151.4 97 69.1
RcHm_v2.0_Chr5g0078291 Rosa chinensis HOM05D004419 ORTHO05D005480 4.8e-35 151.4 97 69.1
Sp3g18830 Schrenkiella parvula HOM05D004419 ORTHO05D005480 4.8e-35 151.4 126 56.3
CsaV3_1G042600 Cucumis sativus L. HOM05D004419 ORTHO05D005480 6.2e-35 151.0 97 70.1
Duzib150G1622 Durio zibethinus HOM05D004419 ORTHO05D005480 6.2e-35 151.0 97 71.1
MELO3C015209.2 Cucumis melo HOM05D004419 ORTHO05D005480 8.1e-35 150.6 97 70.1
FAN25G0488 Fragaria x ananassa HOM05D004419 ORTHO05D005480 1.1e-34 150.2 98 67.3
Manes.14G013900 Manihot esculenta HOM05D004419 ORTHO05D005480 1.1e-34 150.2 97 71.1
Sopen01g002670 Solanum pennellii HOM05D004419 ORTHO05D005480 1.1e-34 150.2 97 67.0
ATR0605G084 Amborella trichopoda HOM05D004419 ORTHO05D005480 1.4e-34 149.8 97 68.0
BcaC05g28276 Brassica carinata HOM05D004419 ORTHO05D005480 1.8e-34 149.4 110 59.1
C05p43260 Brassica napus HOM05D004419 ORTHO05D005480 1.8e-34 149.4 110 59.1
BolC5t33056H Brassica oleracea HOM05D004419 ORTHO05D005480 1.8e-34 149.4 110 59.1
FvH4_3g43600 Fragaria vesca HOM05D004419 ORTHO05D005480 1.8e-34 149.4 97 68.0
FAN11G1953 Fragaria x ananassa HOM05D004419 ORTHO05D005480 1.8e-34 149.4 97 68.0
arahy.Tifrunner.gnm1.ann1.6DX332 Arachis hypogaea HOM05D004419 ORTHO05D005480 2.4e-34 149.1 86 76.7
CANSAT54G1224 Cannabis sativa HOM05D004419 ORTHO05D005480 2.4e-34 149.1 101 68.3
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 2.4e-34 149.1 97 69.1
Nitab4.5_0003250g0020 Nicotiana tabacum HOM05D004419 ORTHO05D005480 2.4e-34 149.1 97 67.0
Cpa.g.sc84.102 Carica papaya HOM05D004419 ORTHO05D005480 3.1e-34 148.7 97 68.0
Migut.D00562 Erythranthe guttata HOM05D004419 ORTHO05D005480 3.1e-34 148.7 97 67.0
CAN.G388.54 Capsicum annuum HOM05D004419 ORTHO05D005480 4.0e-34 148.3 97 64.9
PGR119G1205 Punica granatum HOM05D004419 ORTHO05D005480 5.3e-34 147.9 116 62.9
SHI30509 Sapria himalayana HOM05D004419 ORTHO05D005480 5.3e-34 147.9 111 59.5
QL01p006124 Quercus lobata HOM05D004419 ORTHO05D005480 6.9e-34 147.5 97 70.1
Cc01_g04260 Coffea canephora HOM05D004419 ORTHO05D005480 1.2e-33 146.7 97 67.0
MSTRG.21407 Avicennia marina HOM05D004419 ORTHO05D005480 2.0e-33 146.0 97 66.0
Thhalv10021129m.g Eutrema salsugineum HOM05D004419 ORTHO05D005480 2.0e-33 146.0 96 67.7
QL01p016023 Quercus lobata HOM05D004419 ORTHO05D005480 2.0e-33 146.0 98 68.4
Sc16g0011690 Simmondsia chinensis HOM05D004419 ORTHO05D005480 2.0e-33 146.0 117 60.7
ECA233G0260 Erigeron canadensis HOM05D004419 ORTHO05D005480 2.6e-33 145.6 97 68.0
Sed0001509 Sechium edule HOM05D004419 ORTHO05D005480 3.4e-33 145.2 97 68.0
PGSC0003DMG400021346 Solanum tuberosum HOM05D004419 ORTHO05D005480 3.4e-33 145.2 97 64.9
EL10Ac4g10313 Beta vulgaris HOM05D004419 ORTHO05D005480 5.8e-33 144.4 133 56.4
Oeu024454.3 Olea europaea HOM05D004419 ORTHO05D005480 9.9e-33 143.7 99 63.6
Mapoly0036s0149 Marchantia polymorpha HOM05D004419 ORTHO05D005480 1.7e-32 142.9 97 63.9
SMO364G0845 Selaginella moellendorffii HOM05D004419 ORTHO05D005480 1.7e-32 142.9 109 58.7
vmacro12711 Vaccinium macrocarpon HOM05D004419 ORTHO05D005480 4.9e-32 141.4 132 53.0
Aa31LG8G7630 Aethionema arabicum HOM05D004419 ORTHO05D005480 8.4e-32 140.6 126 54.8
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 8.4e-32 140.6 97 66.0
MBI01_g05106_MAGBIO Magnolia biondii HOM05D004419 ORTHO05D005480 1.1e-31 140.2 150 48.0
Os09g0489200 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 1.9e-31 139.4 97 68.0
Pp3c17_10850 Physcomitrium patens HOM05D004419 ORTHO05D005480 1.9e-31 139.4 97 61.9
MELO3C025411.2 Cucumis melo HOM05D004419 ORTHO05D005480 5.5e-31 137.9 94 69.1
HPP92_017970 Vanilla planifolia HOM05D004419 ORTHO05D005480 9.3e-31 137.1 97 64.9
BcaB06g26154 Brassica carinata HOM05D004419 ORTHO05D005480 3.5e-30 135.2 126 52.4
BcaC05g28277 Brassica carinata HOM05D004419 ORTHO05D005480 3.5e-30 135.2 126 52.4
BcaC05g28278 Brassica carinata HOM05D004419 ORTHO05D005480 3.5e-30 135.2 126 52.4
AagrBONN_evm.TU.Sc2ySwM_117.3437 Anthoceros agrestis HOM05D004419 ORTHO05D005480 7.9e-30 134.0 97 59.8
MD11G1022000 Malus domestica HOM05D004419 ORTHO05D005480 3.9e-29 131.7 97 64.9
Os08g0508500 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 1.9e-28 129.4 97 60.8
Hund22076 Selenicereus undatus HOM05D004419 ORTHO05D005480 3.3e-28 128.6 98 61.2
VMungo1127G0574 Vigna mungo HOM05D004419 ORTHO05D005480 4.3e-28 128.3 89 65.2
Ah.06g193530 Amaranthus hybridus HOM05D004419 ORTHO05D005480 9.6e-28 127.1 126 51.6
Ah.04g161770 Amaranthus hybridus HOM05D004419 ORTHO05D005480 4.0e-26 121.7 97 59.8
HanXRQChr13g0403921 Helianthus annuus HOM05D004419 ORTHO05D005480 9.0e-26 120.6 92 60.9
Solyc01g006680.4 Solanum lycopersicum HOM05D004419 ORTHO05D005480 1.7e-24 116.3 97 57.7
Lsat_1_v5_gn_6_50061 Lactuca sativa HOM05D004419 ORTHO05D005480 3.8e-24 115.2 97 55.7
CBR_g68529 Chara braunii HOM05D004419 ORTHO05D005480 5.5e-23 111.3 117 48.7
AUR62019254 Chenopodium quinoa HOM05D004419 ORTHO05D005480 1.5e-17 93.2 51 76.5
AUR62043680 Chenopodium quinoa HOM05D004419 ORTHO05D005480 1.5e-17 93.2 51 76.5
Rhsim01G0189600 Rhododendron simsii HOM05D004419 ORTHO05D005480 5.9e-17 91.3 51 74.5
Cre11.g467768 Chlamydomonas reinhardtii HOM05D004419 ORTHO05D005480 7.6e-17 90.9 61 68.9
Lj2C654G2 Lonicera japonica HOM05D004419 ORTHO05D005480 1.3e-16 90.1 51 70.6
PRCOL_00002632 Prasinoderma coloniale HOM05D004419 ORTHO05D005480 1.3e-16 90.1 130 34.6
AUR62000082 Chenopodium quinoa HOM05D004419 ORTHO05D005480 3.8e-16 88.6 51 74.5
FAN11G3211 Fragaria x ananassa HOM05D004419 ORTHO05D005480 6.5e-16 87.8 77 54.5
SGA_v2.0_scaffold1G00802 Striga asiatica HOM05D004419 ORTHO05D005480 1.1e-15 87.0 51 66.7
Ca_27145_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 1.2e-14 83.6 61 62.3
Sabra01G0011400 Salix brachista HOM05D004419 ORTHO05D005480 3.6e-14 82.0 58 63.8
Cfa024691 Carpinus fangiana HOM05D003208 ORTHO05D005480 8.8e-13 77.4 129 34.9
RcHm_v2.0_Chr5g0078191 Rosa chinensis HOM05D004419 ORTHO05D005480 1.1e-12 77.0 54 63.0
MCO01G020 Micromonas commoda HOM05D004419 ORTHO05D005480 1.7e-11 73.2 99 34.3
MBI01_g41296_MAGBIO Magnolia biondii HOM05D004419 ORTHO05D005480 3.7e-11 72.0 48 66.7
DCAR_002041 Daucus carota HOM05D004419 ORTHO05D005480 1.1e-10 70.5 47 66.0
Nitab4.5_0000175g0140 Nicotiana tabacum HOM05D004419 ORTHO05D005480 3.1e-10 68.9 68 51.5
MCO11G675 Micromonas commoda HOM05D004419 ORTHO05D005480 5.3e-10 68.2 107 35.5
PRCOL_00006664 Prasinoderma coloniale HOM05D004419 ORTHO05D005480 9.1e-10 67.4 106 34.9
Peaxi162Scf00559g00213 Petunia axillaris HOM05D004419 ORTHO05D005480 1.5e-09 66.6 48 60.4
ClCG03G013430 Citrullus lanatus HOM05D004419 ORTHO05D005480 7.7e-09 64.3 47 66.0
MCO01G585 Micromonas commoda HOM05D004419 ORTHO05D005480 3.8e-08 62.0 62 43.5
Actinidia06326 Actinidia chinensis HOM05D004419 ORTHO05D005480 5.0e-08 61.6 52 53.8
Pp3c5_1010 Physcomitrium patens HOM05D004419 ORTHO05D005480 1.1e-07 60.5 59 47.5
DCAR_010505 Daucus carota HOM05D004419 ORTHO05D013449 1.4e-07 60.1 49 53.1
DCAR_013044 Daucus carota HOM05D004419 ORTHO05D005480 1.4e-07 60.1 45 62.2
DCAR_007794 Daucus carota HOM05D004419 ORTHO05D013449 1.2e-06 57.0 29 75.9
FvH4_3g43632 Fragaria vesca HOM05D004419 ORTHO05D005480 7.9e-06 54.3 41 63.4


User provided reference genes

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