Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 0.0e+00 1345.1 754 100.0
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.2e-48 199.1 773 33.0
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 1.7e-47 195.3 758 32.6
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 2.9e-47 194.5 763 33.4
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 3.9e-44 184.1 769 27.7
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 1.5e-43 182.2 787 32.8
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.8e-42 177.9 764 31.0
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 8.2e-42 176.4 796 33.3
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 1.4e-41 175.6 761 33.2
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 1.6e-40 172.2 758 29.3
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 3.2e-38 164.5 792 28.0
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 1.2e-37 162.5 792 27.5
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.0e-36 159.5 766 32.9
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 6.7e-36 156.8 770 30.4
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 2.6e-35 154.8 771 32.4
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 2.6e-35 154.8 771 26.5
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.3e-35 154.5 764 26.2
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 5.7e-35 153.7 782 30.6
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 2.4e-33 148.3 767 26.6
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 3.1e-33 147.9 773 31.6
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 5.3e-33 147.1 761 28.4
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 7.0e-33 146.7 756 26.7
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 7.7e-32 143.3 781 26.4
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 1.0e-31 142.9 798 26.8
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.0e-31 142.9 765 29.2
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 5.0e-31 140.6 754 26.8
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 8.5e-31 139.8 831 24.5
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 1.5e-30 139.0 773 32.1
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 1.9e-30 138.7 763 24.1
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 9.4e-30 136.3 753 31.3
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 1.6e-29 135.6 796 24.6
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 2.1e-29 135.2 761 32.3
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 6.1e-29 133.7 774 27.9
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 1.0e-28 132.9 758 24.8
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 3.0e-28 131.3 762 28.0
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 3.4e-27 127.9 759 25.4
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.7e-26 125.6 752 28.5
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 2.2e-26 125.2 824 29.5
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 2.2e-26 125.2 778 25.2
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 6.3e-26 123.6 759 30.2
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 6.3e-26 123.6 758 27.2
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 2.0e-24 118.6 832 29.4
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.3e-23 115.9 764 27.2
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 5.0e-23 114.0 760 29.1
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 3.6e-21 107.8 752 28.2
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 4.0e-20 104.4 772 30.4
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 8.8e-20 103.2 760 22.2
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 2.0e-19 102.1 771 27.4
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 2.6e-19 101.7 760 22.5
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.1e-17 96.3 764 23.3
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 1.8e-17 95.5 754 23.1
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 3.1e-17 94.7 764 23.7
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 5.4e-17 94.0 82 54.9
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.6e-16 92.4 767 22.6
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.6e-16 92.4 760 22.4
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 2.3e-15 88.6 164 32.3
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 5.0e-15 87.4 231 30.3
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 1.1e-14 86.3 72 56.9
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 2.1e-13 82.0 262 27.5
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 1.0e-12 79.7 300 25.0
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 4.4e-11 74.3 55 63.6
Ciclev10005021m.g Citrus clementina HOM05D001628 ORTHO05D001568 1.3e-07 62.8 119 31.9
Medtr1g101520 Medicago truncatula HOM05D001628 ORTHO05D001568 1.7e-07 62.4 120 32.5
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 2.3e-07 62.0 120 33.3
arahy.Tifrunner.gnm1.ann1.3M2LT7 Arachis hypogaea HOM05D001628 ORTHO05D001568 3.9e-07 61.2 119 31.1
Duzib205G0174 Durio zibethinus HOM05D001628 ORTHO05D001568 3.9e-07 61.2 119 31.9
Os04g0118900 Oryza sativa ssp. japonica HOM05D001628 ORTHO05D001568 3.9e-07 61.2 86 38.4
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 5.0e-07 60.8 119 31.1
Nitab4.5_0003517g0010 Nicotiana tabacum HOM05D001628 ORTHO05D001568 5.0e-07 60.8 79 41.8
Nitab4.5_0004560g0040 Nicotiana tabacum HOM05D001628 ORTHO05D001568 5.0e-07 60.8 79 41.8
TPR.G17412 Trifolium pratense HOM05D001628 ORTHO05D001568 5.0e-07 60.8 120 31.7
TAR374G1300 Trochodendron aralioides HOM05D001356 ORTHO05D003895 6.6e-07 60.5 119 31.9
Zm00001eb089060 Zea mays HOM05D001628 ORTHO05D001568 6.6e-07 60.5 81 39.5
Phvul.007G066560 Phaseolus vulgaris HOM05D001628 ORTHO05D001568 8.6e-07 60.1 120 32.5
Thecc.03G170400 Theobroma cacao HOM05D001628 ORTHO05D001568 8.6e-07 60.1 119 31.9
Glyma.20G155400 Glycine max HOM05D001628 ORTHO05D001568 1.1e-06 59.7 120 31.7
Lalb_Chr06g0160981 Lupinus albus HOM05D001628 ORTHO05D001568 1.1e-06 59.7 120 32.5
Lalb_Chr17g0342811 Lupinus albus HOM05D001628 ORTHO05D001568 1.1e-06 59.7 82 39.0
vmacro20970 Vaccinium macrocarpon HOM05D001628 ORTHO05D001568 1.1e-06 59.7 119 31.9
Gohir.A12G260700 Gossypium hirsutum HOM05D001628 ORTHO05D001568 1.5e-06 59.3 120 30.8
Gohir.D12G261600 Gossypium hirsutum HOM05D001628 ORTHO05D001568 1.5e-06 59.3 120 30.8
Gorai.008G280300 Gossypium raimondii HOM05D001628 ORTHO05D001568 1.5e-06 59.3 120 30.8
CiPaw.01G054000 Carya illinoinensis HOM05D001628 ORTHO05D001568 1.9e-06 58.9 128 32.0
CDE02G2471 Ceratophyllum demersum HOM05D001628 ORTHO05D001568 1.9e-06 58.9 126 29.4
Glyma.10G239100 Glycine max HOM05D001628 ORTHO05D001568 1.9e-06 58.9 119 30.3
Hma1.2p1_0099F.1_g048570 Hydrangea macrophylla HOM05D001628 ORTHO05D001568 1.9e-06 58.9 120 30.0
LjContig00238g0025597 Lotus japonicus HOM05D001628 ORTHO05D001568 1.9e-06 58.9 120 30.8
Lalb_Chr21g0304941 Lupinus albus HOM05D001628 ORTHO05D001568 1.9e-06 58.9 121 32.2
Zm00001eb282350 Zea mays HOM05D002912 ORTHO05D003191 1.9e-06 58.9 68 42.6
Zm00001eb419960 Zea mays HOM05D001628 ORTHO05D001568 1.9e-06 58.9 81 38.3
Duzib084G0415 Durio zibethinus HOM05D001628 ORTHO05D001568 2.5e-06 58.5 119 31.9
Eucgr.K00223 Eucalyptus grandis HOM05D001628 ORTHO05D001568 2.5e-06 58.5 119 31.9
Peaxi162Scf00557g00719 Petunia axillaris HOM05D001628 ORTHO05D001568 2.5e-06 58.5 119 31.1
Phvul.010G116100 Phaseolus vulgaris HOM05D001628 ORTHO05D001568 2.5e-06 58.5 81 38.3
Hund27324 Selenicereus undatus HOM05D001628 ORTHO05D001568 2.5e-06 58.5 123 31.7
TAR375G0524 Trochodendron aralioides HOM05D001356 ORTHO05D003895 2.5e-06 58.5 122 32.0
VMungo0331G0619 Vigna mungo HOM05D001628 ORTHO05D001568 2.5e-06 58.5 81 38.3
CSS0015400 Camellia sinensis var. sinensis HOM05D001628 ORTHO05D001568 3.3e-06 58.2 120 30.8
CSS0023632 Camellia sinensis var. sinensis HOM05D001628 ORTHO05D001568 3.3e-06 58.2 120 30.8
COL.COLO4_14256 Corchorus olitorius HOM05D001628 ORTHO05D001568 3.3e-06 58.2 82 36.6
Potri.014G076600 Populus trichocarpa HOM05D001628 ORTHO05D001568 3.3e-06 58.2 120 31.7
SGA_v2.0_scaffold221G42734 Striga asiatica HOM05D001628 ORTHO05D001568 3.3e-06 58.2 129 32.6
TWI39G1065 Tripterygium wilfordii HOM05D001628 ORTHO05D001568 3.3e-06 58.2 122 31.1
Migut.F00378 Erythranthe guttata HOM05D001628 ORTHO05D001568 4.3e-06 57.8 119 30.3
Manes.06G143500 Manihot esculenta HOM05D001628 ORTHO05D001568 4.3e-06 57.8 119 32.8
Solyc11g072340.2 Solanum lycopersicum HOM05D001628 ORTHO05D001568 4.3e-06 57.8 119 33.6
Sopen11g030010 Solanum pennellii HOM05D001628 ORTHO05D001568 4.3e-06 57.8 119 33.6
Aa31LG10G15840 Aethionema arabicum HOM05D001628 ORTHO05D001568 5.6e-06 57.4 71 38.0
Medtr8g027190 Medicago truncatula HOM05D001628 ORTHO05D001568 5.6e-06 57.4 82 39.0
SalBow4G1993 Salvia bowleyana HOM05D001628 ORTHO05D001568 5.6e-06 57.4 120 32.5
TWI14G0669 Tripterygium wilfordii HOM05D001628 ORTHO05D001568 5.6e-06 57.4 120 30.8
HPP92_021003 Vanilla planifolia HOM05D001628 ORTHO05D001568 5.6e-06 57.4 117 33.3
arahy.Tifrunner.gnm1.ann1.0F9H7B Arachis hypogaea HOM05D001628 ORTHO05D001568 7.3e-06 57.0 77 39.0
arahy.Tifrunner.gnm1.ann1.347JW8 Arachis hypogaea HOM05D001628 ORTHO05D001568 7.3e-06 57.0 77 39.0
arahy.Tifrunner.gnm1.ann1.HB5M7L Arachis hypogaea HOM05D001628 ORTHO05D001568 7.3e-06 57.0 77 39.0
SGA_v2.0_scaffold2G01082 Striga asiatica HOM05D001628 ORTHO05D001568 7.3e-06 57.0 79 38.0
Atru.chr1.520 Acer truncatum HOM05D001628 ORTHO05D001568 9.5e-06 56.6 119 29.4
CANSAT56G4432 Cannabis sativa HOM05D001628 ORTHO05D001568 9.5e-06 56.6 77 37.7
Lalb_Chr04g0261411 Lupinus albus HOM05D001628 ORTHO05D001568 9.5e-06 56.6 73 41.1
Lalb_Chr18g0044511 Lupinus albus HOM05D001628 ORTHO05D001568 9.5e-06 56.6 73 41.1
MBI04_g06925_MAGBIO Magnolia biondii HOM05D001628 ORTHO05D001568 9.5e-06 56.6 71 39.4
Potri.015G135800 Populus trichocarpa HOM05D001628 ORTHO05D001568 9.5e-06 56.6 119 30.3
Hund27172 Selenicereus undatus HOM05D001628 ORTHO05D001568 9.5e-06 56.6 82 39.0


User provided reference genes

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