Gene: HPP92_021003

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_021003
  • Transcript Identifier Vpl11Ag21003.1
  • Gene Type Coding gene
  • Location CM028160.1 : 6291795-6294751 : positive

Gene Family Information

  • ID HOM05D001628
  • #Genes/#Species 396/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl11Ag21003.1
  • pid KAG0460706.1

Descriptions

  • Description Arginine/serine-rich splicing factor, putative ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61860
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G61860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G61860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31/40/41)