Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_05042 Sequoiadendron giganteum HOM05D001533 ORTHO05D003743 3.9e-54 214.5 108 100.0
SEGI_18233 Sequoiadendron giganteum HOM05D001533 ORTHO05D003743 2.8e-20 102.1 62 82.3
COL.COLO4_21924 Corchorus olitorius HOM05D001533 ORTHO05D003743 6.1e-15 84.3 64 67.2
Manes.11G093500 Manihot esculenta HOM05D001533 ORTHO05D003743 8.0e-15 84.0 62 62.9
Potri.004G164500 Populus trichocarpa HOM05D001533 ORTHO05D003743 8.0e-15 84.0 62 62.9
Thecc.02G072800 Theobroma cacao HOM05D001533 ORTHO05D003743 1.0e-14 83.6 62 62.9
TAR376G0125 Trochodendron aralioides HOM05D001533 ORTHO05D003743 1.8e-14 82.8 62 64.5
Duzib132G0324 Durio zibethinus HOM05D001533 ORTHO05D003743 3.0e-14 82.0 62 62.9
Os06g0137300 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D003743 5.2e-14 81.3 66 63.6
Ciclev10029039m.g Citrus clementina HOM05D001533 ORTHO05D003743 8.8e-14 80.5 60 60.0
TWI79G0606 Tripterygium wilfordii HOM05D001533 ORTHO05D003743 8.8e-14 80.5 62 61.3
TAR381G1712 Trochodendron aralioides HOM05D001533 ORTHO05D003743 1.1e-13 80.1 60 63.3
COL.COLO4_10610 Corchorus olitorius HOM05D001533 ORTHO05D003743 1.5e-13 79.7 62 61.3
Nn5g29286 Nelumbo nucifera HOM05D001533 ORTHO05D003743 1.5e-13 79.7 62 62.9
CAN.G416.31 Capsicum annuum HOM05D001533 ORTHO05D003743 2.0e-13 79.3 56 66.1
Cpa.g.sc37.228 Carica papaya HOM05D001533 ORTHO05D003743 2.0e-13 79.3 61 62.3
CiPaw.06G126900 Carya illinoinensis HOM05D001533 ORTHO05D003743 2.0e-13 79.3 59 62.7
Gohir.A12G039650 Gossypium hirsutum HOM05D001533 ORTHO05D003743 2.0e-13 79.3 55 67.3
Gohir.A12G040300 Gossypium hirsutum HOM05D001533 ORTHO05D003743 2.0e-13 79.3 55 67.3
Gohir.D12G032000 Gossypium hirsutum HOM05D001533 ORTHO05D003743 2.0e-13 79.3 55 67.3
Gorai.008G032700 Gossypium raimondii HOM05D001533 ORTHO05D003743 2.0e-13 79.3 55 67.3
Sopen04g030870 Solanum pennellii HOM05D001533 ORTHO05D003743 2.0e-13 79.3 59 64.4
AL8G13080 Arabidopsis lyrata HOM05D001533 ORTHO05D003743 2.6e-13 79.0 60 61.7
AT5G45600 Arabidopsis thaliana HOM05D001533 ORTHO05D003743 2.6e-13 79.0 60 61.7
arahy.Tifrunner.gnm1.ann1.IQ7S3S Arachis hypogaea HOM05D001533 ORTHO05D003743 2.6e-13 79.0 53 69.8
Haze_02223 Corylus avellana HOM05D001533 ORTHO05D009961 2.6e-13 79.0 64 60.9
Gorai.008G033500 Gossypium raimondii HOM05D001533 ORTHO05D003743 2.6e-13 79.0 61 62.3
Lalb_Chr09g0321771 Lupinus albus HOM05D001533 ORTHO05D003743 2.6e-13 79.0 54 68.5
CARHR176430 Cardamine hirsuta HOM05D001533 ORTHO05D003743 3.3e-13 78.6 60 60.0
Nitab4.5_0006143g0020 Nicotiana tabacum HOM05D001533 ORTHO05D003743 4.4e-13 78.2 59 66.1
PSO210G6416 Papaver somniferum HOM05D001533 ORTHO05D003743 4.4e-13 78.2 62 61.3
Psat2g154800 Pisum sativum HOM05D001533 ORTHO05D003743 4.4e-13 78.2 55 63.6
Potri.009G126200 Populus trichocarpa HOM05D001533 ORTHO05D003743 4.4e-13 78.2 62 58.1
Zm00001eb356340 Zea mays HOM05D001533 ORTHO05D003743 4.4e-13 78.2 69 60.9
arahy.Tifrunner.gnm1.ann1.F451U0 Arachis hypogaea HOM05D001533 ORTHO05D003743 5.7e-13 77.8 53 67.9
RcHm_v2.0_Chr6g0268561 Rosa chinensis HOM05D001533 ORTHO05D003743 5.7e-13 77.8 62 58.1
SGA_v2.0_scaffold32G13252 Striga asiatica HOM05D001533 ORTHO05D003743 5.7e-13 77.8 57 63.2
Thecc.01G020400 Theobroma cacao HOM05D001533 ORTHO05D003743 5.7e-13 77.8 61 62.3
HPP92_025698 Vanilla planifolia HOM05D001533 ORTHO05D003743 5.7e-13 77.8 54 70.4
Aqoxy5G01438 Aquilegia oxysepala HOM05D001533 ORTHO05D003743 7.4e-13 77.4 62 56.5
BcaC06g34420 Brassica carinata HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
A06p46510 Brassica napus HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
C07p28700 Brassica napus HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
BolC7t43408H Brassica oleracea HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
BraA06t27525Z Brassica rapa HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
Carub.0008s0243 Capsella rubella HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 58.3
FvH4_2g10790 Fragaria vesca HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 58.3
FAN15G1762 Fragaria x ananassa HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 58.3
Gohir.A11G041800 Gossypium hirsutum HOM05D001533 ORTHO05D003743 7.4e-13 77.4 61 62.3
Gorai.007G048500 Gossypium raimondii HOM05D001533 ORTHO05D003743 7.4e-13 77.4 61 62.3
Peaxi162Scf00684g00120 Petunia axillaris HOM05D001533 ORTHO05D003743 7.4e-13 77.4 59 64.4
Sp2g10490 Schrenkiella parvula HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 60.0
Solyc04g077290.3 Solanum lycopersicum HOM05D001533 ORTHO05D003743 7.4e-13 77.4 60 61.7
BcaC06g31536 Brassica carinata HOM05D001533 ORTHO05D003743 9.7e-13 77.0 60 60.0
Dinv40080 Davidia involucrata HOM05D001533 ORTHO05D003743 9.7e-13 77.0 57 63.2
Glyma.01G166600 Glycine max HOM05D001533 ORTHO05D003743 9.7e-13 77.0 54 64.8
THA.LOC104804106 Tarenaya hassleriana HOM05D001533 ORTHO05D003743 9.7e-13 77.0 62 58.1
ATR0820G278 Amborella trichopoda HOM05D001533 ORTHO05D003743 1.3e-12 76.6 62 58.1
MSTRG.20025 Avicennia marina HOM05D001533 ORTHO05D003743 1.3e-12 76.6 59 62.7
ClCG01G020200 Citrullus lanatus HOM05D001533 ORTHO05D003743 1.3e-12 76.6 54 66.7
Thhalv10000994m.g Eutrema salsugineum HOM05D001533 ORTHO05D003743 1.3e-12 76.6 61 59.0
FAN20G2755 Fragaria x ananassa HOM05D001533 ORTHO05D003743 1.3e-12 76.6 61 57.4
Glyma.12G035600 Glycine max HOM05D001533 ORTHO05D003743 1.3e-12 76.6 60 58.3
GSVIVG01018795001 Vitis vinifera HOM05D001533 ORTHO05D003743 1.3e-12 76.6 50 70.0
Duzib264G0856 Durio zibethinus HOM05D001533 ORTHO05D003743 1.7e-12 76.3 61 62.3
Eucgr.I02357 Eucalyptus grandis HOM05D001533 ORTHO05D003743 1.7e-12 76.3 54 64.8
Lj2g0002663 Lotus japonicus HOM05D001533 ORTHO05D003743 1.7e-12 76.3 60 61.7
Medtr4g072210 Medicago truncatula HOM05D001533 ORTHO05D003743 1.7e-12 76.3 62 56.5
PSO170G1298 Papaver somniferum HOM05D001533 ORTHO05D003743 1.7e-12 76.3 62 59.7
Aa31LG7G15280 Aethionema arabicum HOM05D001533 ORTHO05D003743 2.2e-12 75.9 60 58.3
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 2.2e-12 75.9 54 64.8
MBI05_g12567_MAGBIO Magnolia biondii HOM05D000953 ORTHO05D000231 2.2e-12 75.9 66 53.0
Phvul.002G109100 Phaseolus vulgaris HOM05D001533 ORTHO05D003743 2.2e-12 75.9 54 66.7
VMungo1127G1980 Vigna mungo HOM05D001533 ORTHO05D003743 2.2e-12 75.9 62 56.5
VMungo1215G3324 Vigna mungo HOM05D001533 ORTHO05D003743 2.2e-12 75.9 54 66.7
MELO3C007894.2 Cucumis melo HOM05D001533 ORTHO05D003743 2.8e-12 75.5 54 64.8
Lalb_Chr01g0002071 Lupinus albus HOM05D001533 ORTHO05D003743 2.8e-12 75.5 65 53.8
MD10G1061200 Malus domestica HOM05D001533 ORTHO05D003743 2.8e-12 75.5 61 57.4
Nitab4.5_0001154g0020 Nicotiana tabacum HOM05D001533 ORTHO05D003743 2.8e-12 75.5 56 64.3
arahy.Tifrunner.gnm1.ann1.89M253 Arachis hypogaea HOM05D001533 ORTHO05D003743 3.7e-12 75.1 61 57.4
arahy.Tifrunner.gnm1.ann1.QP2BKI Arachis hypogaea HOM05D001533 ORTHO05D003743 3.7e-12 75.1 61 57.4
Prupe.8G082000 Prunus persica HOM05D001533 ORTHO05D003743 3.7e-12 75.1 63 57.1
QL06p033515 Quercus lobata HOM05D001533 ORTHO05D003743 3.7e-12 75.1 54 66.7
TPR.G23765 Trifolium pratense HOM05D001533 ORTHO05D003743 3.7e-12 75.1 59 57.6
CiPaw.08G132300 Carya illinoinensis HOM05D001533 ORTHO05D003743 4.8e-12 74.7 50 66.0
FvH4_1g11970 Fragaria vesca HOM05D001533 ORTHO05D003743 4.8e-12 74.7 64 57.8
FAN19G2078 Fragaria x ananassa HOM05D001533 ORTHO05D003743 4.8e-12 74.7 64 57.8
FAN28G0531 Fragaria x ananassa HOM05D001533 ORTHO05D003743 4.8e-12 74.7 64 57.8
Hma1.2p1_0032F.1_g019960 Hydrangea macrophylla HOM05D001533 ORTHO05D003743 4.8e-12 74.7 59 59.3
MD15G1246700 Malus domestica HOM05D001533 ORTHO05D003743 4.8e-12 74.7 64 56.2
RcHm_v2.0_Chr2g0099591 Rosa chinensis HOM05D001533 ORTHO05D003743 4.8e-12 74.7 64 57.8
vmacro17407 Vaccinium macrocarpon HOM05D001533 ORTHO05D003743 4.8e-12 74.7 70 52.9
CSS0003132 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D003743 6.3e-12 74.3 57 59.6
Haze_03775 Corylus avellana HOM05D001533 ORTHO05D003743 6.3e-12 74.3 54 63.0
Dinv41985 Davidia involucrata HOM05D001533 ORTHO05D003743 6.3e-12 74.3 60 58.3
Medtr5g021980 Medicago truncatula HOM05D001533 ORTHO05D003743 6.3e-12 74.3 57 61.4
Nn6g32314 Nelumbo nucifera HOM05D001533 ORTHO05D003743 6.3e-12 74.3 55 61.8
PGSC0003DMG400004929 Solanum tuberosum HOM05D001533 ORTHO05D003743 6.3e-12 74.3 59 62.7
TPR.G18196 Trifolium pratense HOM05D001533 ORTHO05D003743 6.3e-12 74.3 50 66.0
Ca_25827_v3 Cicer arietinum L. HOM05D001533 ORTHO05D003743 8.2e-12 73.9 57 61.4
Cc02_g16780 Coffea canephora HOM05D001533 ORTHO05D003743 8.2e-12 73.9 60 60.0
Glyma.11G076700 Glycine max HOM05D001533 ORTHO05D003743 8.2e-12 73.9 54 64.8
Lj3g0003371 Lotus japonicus HOM05D001533 ORTHO05D003743 8.2e-12 73.9 62 54.8
GSVIVG01024149001 Vitis vinifera HOM05D001533 ORTHO05D003743 8.2e-12 73.9 62 58.1
Peaxi162Scf00083g00715 Petunia axillaris HOM05D001533 ORTHO05D003743 1.1e-11 73.6 60 60.0
MSTRG.2704 Avicennia marina HOM05D001533 ORTHO05D003743 1.4e-11 73.2 49 67.3
Manes.02G103400 Manihot esculenta HOM05D001533 ORTHO05D003743 1.4e-11 73.2 67 55.2
SalBow3G1042 Salvia bowleyana HOM05D001533 ORTHO05D003743 1.4e-11 73.2 49 69.4
AUR62007520 Chenopodium quinoa HOM05D001533 ORTHO05D003743 1.8e-11 72.8 59 57.6
AUR62042798 Chenopodium quinoa HOM05D001533 ORTHO05D003743 1.8e-11 72.8 51 62.7
AUR62043757 Chenopodium quinoa HOM05D001533 ORTHO05D003743 1.8e-11 72.8 51 62.7
FAN26G2553 Fragaria x ananassa HOM05D001533 ORTHO05D003743 1.8e-11 72.8 64 56.2
Prupe.7G167100 Prunus persica HOM05D001533 ORTHO05D003743 1.8e-11 72.8 64 56.2
Solyc02g084000.3 Solanum lycopersicum HOM05D001533 ORTHO05D003743 1.8e-11 72.8 58 60.3
TWI53G0067 Tripterygium wilfordii HOM05D001533 ORTHO05D003743 1.8e-11 72.8 63 58.7
unitig_60.g25828 Utricularia gibba HOM05D001533 ORTHO05D003743 1.8e-11 72.8 53 64.2
CAN.G1671.5 Capsicum annuum HOM05D001533 ORTHO05D003743 2.4e-11 72.4 52 63.5
CsaV3_6G047010 Cucumis sativus L. HOM05D001533 ORTHO05D003743 2.4e-11 72.4 54 63.0
Phvul.011G037800 Phaseolus vulgaris HOM05D001533 ORTHO05D003743 2.4e-11 72.4 61 55.7
Sed0007682 Sechium edule HOM05D001533 ORTHO05D003743 2.4e-11 72.4 60 58.3
ECA238G4783 Erigeron canadensis HOM05D001533 ORTHO05D003743 3.1e-11 72.0 64 56.2
Psat7g181560 Pisum sativum HOM05D001533 ORTHO05D003743 3.1e-11 72.0 66 53.0
PGR119G1942 Punica granatum HOM05D001533 ORTHO05D003743 3.1e-11 72.0 61 59.0
Sed0016263 Sechium edule HOM05D001533 ORTHO05D003743 3.1e-11 72.0 54 63.0
CDE11G0992 Ceratophyllum demersum HOM05D001533 ORTHO05D000005 4.1e-11 71.6 60 60.0
Oeu060409.1 Olea europaea HOM05D001533 ORTHO05D003743 7.0e-11 70.9 60 58.3
Sopen02g028800 Solanum pennellii HOM05D001533 ORTHO05D003743 9.1e-11 70.5 58 58.6
Ah.03g141750 Amaranthus hybridus HOM05D001533 ORTHO05D003743 1.2e-10 70.1 58 56.9
Ciclev10026276m.g Citrus clementina HOM05D001533 ORTHO05D003743 1.2e-10 70.1 49 65.3
Migut.B00130 Erythranthe guttata HOM05D001533 ORTHO05D003743 1.2e-10 70.1 59 55.9
Cc00_g26590 Coffea canephora HOM05D001533 ORTHO05D003743 1.6e-10 69.7 60 58.3
SalBow6G3565 Salvia bowleyana HOM05D001533 ORTHO05D003743 1.6e-10 69.7 61 57.4
CANSAT11G2241 Cannabis sativa HOM05D001533 ORTHO05D003743 2.0e-10 69.3 62 56.5
FAN23G0315 Fragaria x ananassa HOM05D001533 ORTHO05D003743 2.6e-10 68.9 64 53.1
Nitab4.5_0004254g0070 Nicotiana tabacum HOM05D001533 ORTHO05D003743 3.5e-10 68.6 58 58.6
AL3G51070 Arabidopsis lyrata HOM05D001533 ORTHO05D003743 4.5e-10 68.2 58 51.7
CSS0027230 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D003743 4.5e-10 68.2 54 61.1
CANSAT01G0161 Cannabis sativa HOM05D001533 ORTHO05D003743 5.9e-10 67.8 54 59.3
SGA_v2.0_scaffold58G20442 Striga asiatica HOM05D001533 ORTHO05D003743 1.0e-09 67.0 58 55.2
HanXRQChr14g0441321 Helianthus annuus HOM05D001533 ORTHO05D003743 1.3e-09 66.6 50 60.0
Lj4A217T67 Lonicera japonica HOM05D001533 ORTHO05D003743 1.3e-09 66.6 50 62.0
Sc14g0001890 Simmondsia chinensis HOM05D001533 ORTHO05D003743 1.3e-09 66.6 57 57.9
Sc16g0002070 Simmondsia chinensis HOM05D001533 ORTHO05D003743 1.3e-09 66.6 56 53.6
AT2G18000 Arabidopsis thaliana HOM05D001533 ORTHO05D003743 2.2e-09 65.9 58 51.7
Carub.0003s3214 Capsella rubella HOM05D001533 ORTHO05D003743 2.2e-09 65.9 52 59.6
Actinidia22986 Actinidia chinensis HOM05D001533 ORTHO05D003743 3.8e-09 65.1 57 57.9
C07p04970 Brassica napus HOM05D001533 ORTHO05D003743 3.8e-09 65.1 52 55.8
BolC7t40898H Brassica oleracea HOM05D001533 ORTHO05D003743 3.8e-09 65.1 52 55.8
AagrBONN_evm.TU.Sc2ySwM_368.463 Anthoceros agrestis HOM05D001533 ORTHO05D003743 8.5e-09 63.9 59 49.2
HanXRQChr13g0389031 Helianthus annuus HOM05D001533 ORTHO05D003743 8.5e-09 63.9 55 56.4
A07p02670 Brassica napus HOM05D001533 ORTHO05D003743 1.1e-08 63.5 53 54.7
BraA07t28063Z Brassica rapa HOM05D001533 ORTHO05D003743 1.1e-08 63.5 53 54.7
Sp3g31430 Schrenkiella parvula HOM05D001533 ORTHO05D003743 1.1e-08 63.5 56 51.8
AagrBONN_evm.TU.Sc2ySwM_228.2345 Anthoceros agrestis HOM05D001533 ORTHO05D003743 1.5e-08 63.2 59 49.2
Hund14041 Selenicereus undatus HOM05D001533 ORTHO05D003743 1.5e-08 63.2 50 60.0
Atru.chr5.3180 Acer truncatum HOM05D001533 ORTHO05D003743 1.9e-08 62.8 44 68.2
BcaC06g36352 Brassica carinata HOM05D001533 ORTHO05D003743 1.9e-08 62.8 52 53.8
Hund19697 Selenicereus undatus HOM05D001533 ORTHO05D003743 1.9e-08 62.8 65 50.8
Thhalv10022830m.g Eutrema salsugineum HOM05D001533 ORTHO05D003743 2.5e-08 62.4 56 50.0
Sabra07G0009800 Salix brachista HOM05D001533 ORTHO05D003743 4.2e-08 61.6 53 52.8
SEGI_23040 Sequoiadendron giganteum HOM05D001533 ORTHO05D003743 5.5e-08 61.2 34 85.3
BcaB03g16587 Brassica carinata HOM05D001533 ORTHO05D003743 7.2e-08 60.8 53 50.9
CARHR108490 Cardamine hirsuta HOM05D001533 ORTHO05D003743 9.4e-08 60.5 54 51.9
Rhsim10G0213200 Rhododendron simsii HOM05D001533 ORTHO05D003743 2.7e-07 58.9 46 58.7
Aa31LG8G15180 Aethionema arabicum HOM05D001533 ORTHO05D003743 3.6e-07 58.5 44 61.4
SMO143G0294 Selaginella moellendorffii HOM05D001533 ORTHO05D003743 3.6e-07 58.5 60 45.0
QL11p046808 Quercus lobata HOM05D001533 ORTHO05D003743 4.7e-07 58.2 34 76.5
vmacro21916 Vaccinium macrocarpon HOM05D001533 ORTHO05D003743 4.7e-07 58.2 57 54.4
FAN24G2176 Fragaria x ananassa HOM05D001533 ORTHO05D003743 6.1e-07 57.8 35 74.3
Mapoly0169s0015 Marchantia polymorpha HOM05D001533 ORTHO05D003743 6.1e-07 57.8 61 39.3
Hma1.2p1_0743F.1_g211560 Hydrangea macrophylla HOM05D001533 ORTHO05D003743 8.0e-07 57.4 54 57.4
Hma1.2p1_2281F.1_g318800 Hydrangea macrophylla HOM05D001533 ORTHO05D003743 8.0e-07 57.4 54 57.4
Dinv33620 Davidia involucrata HOM05D001533 ORTHO05D003743 1.4e-06 56.6 36 69.4
Actinidia17454 Actinidia chinensis HOM05D001533 ORTHO05D003743 2.3e-06 55.8 47 59.6
Pp3c12_18350 Physcomitrium patens HOM05D001533 ORTHO05D003743 2.3e-06 55.8 60 41.7
RcHm_v2.0_Chr6g0268781 Rosa chinensis HOM05D001533 ORTHO05D003743 4.0e-06 55.1 91 40.7
TAR636G2715 Trochodendron aralioides HOM05D001533 ORTHO05D003743 4.0e-06 55.1 35 74.3
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 8.8e-06 53.9 33 72.7


User provided reference genes

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