Gene: Cc00_g26590
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc00_g26590
- Transcript Identifier Cc00_g26590.1
- Gene Type Coding gene
- Location chr0 : 167800342-167802393 : negative
Gene Family Information
- ID HOM05D001533
- #Genes/#Species 415/99
- Phylogenetic origin
- ID ORTHO05D003743
- #Genes/#Species 207/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB P53930
- UniProtKB I1LI12
- UniProtKB G7JW72
- UniProtKB Q6CIV8
- UniProtKB Q755P0
- UniProtKB C6TC74
- id GSCOCG00004254001
Descriptions
- Description YEATS family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT2G18000 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | AT2G18000 |
| GO:0043981 | ISO | PLAZA Integrative Orthology | histone H4-K5 acetylation | AT2G18000 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT2G18000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G18000 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G18000 |
| GO:0035267 | ISO | PLAZA Integrative Orthology | NuA4 histone acetyltransferase complex | AT2G18000 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.1.1.5.2 | Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.component YAF9 |
| 12.4.4.7.2 | Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.component YAF9 |
| 15.3.4.2.9 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF14 |