Gene: AT5G45600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G45600
  • Transcript Identifier AT5G45600.1
  • Gene Type Coding gene
  • Location Chr5 : 18488059-18489666 : positive

Gene Family Information

  • ID HOM05D001533
  • #Genes/#Species 415/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G45600.1
  • symbol GAS41
  • Alias TAF14B,TBP-ASSOCIATED FACTOR 14B,YAF9a,homolog of yeast YAF9 a
  • full_name GLIOMAS 41
  • uniprot Q9FH40

Descriptions

  • Description YEATS family protein
  • Computational description GLIOMAS 41 (GAS41); INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: YEATS (InterPro:IPR005033); BEST Arabidopsis thaliana protein match is: TBP-associated factor 14 (TAIR:AT2G18000.2); Has 807 Blast hits to 807 proteins in 219 species: Archae - 0; Bacteria - 0; Metazoa - 350; Fungi - 284; Plants - 64; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009909
IMP
GOA Databaseregulation of flower development
GO:0043981
IMP
GOA Databasehistone H4-K5 acetylation
GO:0043981
IGI
Gene Ontologyhistone H4-K5 acetylation1
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009908
IEA
GOA Databaseflower development
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006325
IEA
GOA Databasechromatin organization
GO:0006281
IEA
GOA DatabaseDNA repair
GO:2000028
IGI
Gene Ontologyregulation of photoperiodism, flowering1
GO:0090239
IMP
Gene Ontologyregulation of histone H4 acetylation2
GO:0048510
IMP
Gene Ontologyregulation of timing of transition from vegetative to reproductive phase2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0005634
IPI
ISS
Gene Ontologynucleus1 3
GO:0035267
IDA
GOA DatabaseNuA4 histone acetyltransferase complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005033 YEATS
IPR038704 YEATS superfamily
Mapman id Description
12.3.1.1.5.2 Chromatin organisation.post-translational histone modification.histone acetylation.NuA4 histone acetyltransferase complex.module shared with NuA4/SWR1 complexes.component YAF9
12.4.4.7.2 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.SWR1/NuA4-complexes shared module.component YAF9
15.3.4.2.9 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TFIId complex.component TAF14