Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04488 Sequoiadendron giganteum HOM05D002360 ORTHO05D006971 1.2e-36 156.0 76 100.0
SEGI_20141 Sequoiadendron giganteum HOM05D002360 ORTHO05D006971 1.2e-36 156.0 76 100.0
AUR62001382 Chenopodium quinoa HOM05D002360 ORTHO05D006971 4.1e-26 120.9 63 87.3
AUR62025597 Chenopodium quinoa HOM05D002360 ORTHO05D006971 9.2e-26 119.8 63 85.7
EL10Ac7g18238 Beta vulgaris HOM05D002360 ORTHO05D006971 1.6e-25 119.0 63 85.7
HanXRQChr15g0497361 Helianthus annuus HOM05D002360 ORTHO05D006971 3.5e-25 117.9 63 85.7
Ah.15g094770 Amaranthus hybridus HOM05D002360 ORTHO05D006971 4.6e-25 117.5 63 85.7
Aa31LG9G3180 Aethionema arabicum HOM05D002360 ORTHO05D006971 1.0e-24 116.3 63 82.5
Carub.0007s2818 Capsella rubella HOM05D002360 ORTHO05D006971 1.0e-24 116.3 63 82.5
Sc15g0000870 Simmondsia chinensis HOM05D002360 ORTHO05D006971 1.0e-24 116.3 63 84.1
A08p24280 Brassica napus HOM05D002360 ORTHO05D006971 3.0e-24 114.8 63 82.5
BraA08t34383Z Brassica rapa HOM05D002360 ORTHO05D006971 3.0e-24 114.8 63 82.5
ECA232G4402 Erigeron canadensis HOM05D002360 ORTHO05D006971 3.9e-24 114.4 63 82.5
Thhalv10024795m.g Eutrema salsugineum HOM05D002360 ORTHO05D006971 3.9e-24 114.4 63 82.5
Mapoly0108s0060 Marchantia polymorpha HOM05D002360 ORTHO05D006971 3.9e-24 114.4 63 81.0
Os03g0184000 Oryza sativa ssp. japonica HOM05D002360 ORTHO05D006971 5.0e-24 114.0 63 81.0
BcaB02g08628 Brassica carinata HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
BcaC01g00209 Brassica carinata HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
BcaC02g09347 Brassica carinata HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
A04p07910 Brassica napus HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
C03p76930 Brassica napus HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
C04p41610 Brassica napus HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
BolC3t19948H Brassica oleracea HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
BolC4t25740H Brassica oleracea HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
BraA04t16480Z Brassica rapa HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
Sp7g12070 Schrenkiella parvula HOM05D002360 ORTHO05D006971 6.6e-24 113.6 63 81.0
CANSAT78G1063 Cannabis sativa HOM05D002360 ORTHO05D006971 1.1e-23 112.8 63 81.0
CARHR220290 Cardamine hirsuta HOM05D002360 ORTHO05D006971 1.1e-23 112.8 63 81.0
CDE07G0903 Ceratophyllum demersum HOM05D002360 ORTHO05D006971 1.1e-23 112.8 63 81.0
AL7G42150 Arabidopsis lyrata HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 79.4
AT4G14210 Arabidopsis thaliana HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 79.4
BcaNung05576 Brassica carinata HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 79.4
PSO135G0108 Papaver somniferum HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 81.0
PSO135G0985 Papaver somniferum HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 81.0
Zm00001eb006300 Zea mays HOM05D002360 ORTHO05D006971 1.5e-23 112.5 63 81.0
Actinidia31141 Actinidia chinensis HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 79.4
Aqoxy7G00909 Aquilegia oxysepala HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 81.0
Haze_11694 Corylus avellana HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 77.8
Lsat_1_v5_gn_4_89381 Lactuca sativa HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 81.0
Solyc03g123760.3 Solanum lycopersicum HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 77.8
PGSC0003DMG400009156 Solanum tuberosum HOM05D002360 ORTHO05D006971 3.3e-23 111.3 63 77.8
CAN.G790.47 Capsicum annuum HOM05D002360 ORTHO05D006971 4.3e-23 110.9 63 76.2
Lj9A539T91 Lonicera japonica HOM05D002360 ORTHO05D006971 4.3e-23 110.9 63 77.8
RcHm_v2.0_Chr4g0411571 Rosa chinensis HOM05D002360 ORTHO05D006971 4.3e-23 110.9 63 79.4
TAR371G0365 Trochodendron aralioides HOM05D002360 ORTHO05D006971 4.3e-23 110.9 63 79.4
Actinidia25995 Actinidia chinensis HOM05D002360 ORTHO05D006971 5.6e-23 110.5 63 79.4
Eucgr.H02625 Eucalyptus grandis HOM05D002360 ORTHO05D006971 7.3e-23 110.2 63 79.4
Phvul.001G264200 Phaseolus vulgaris HOM05D002360 ORTHO05D006971 7.3e-23 110.2 63 77.8
Sopen03g041530 Solanum pennellii HOM05D002360 ORTHO05D006971 7.3e-23 110.2 63 76.2
CDE06G2307 Ceratophyllum demersum HOM05D002360 ORTHO05D006971 9.5e-23 109.8 63 79.4
Migut.I01145 Erythranthe guttata HOM05D002360 ORTHO05D006971 9.5e-23 109.8 63 77.8
MBI19_g32880_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006971 9.5e-23 109.8 63 79.4
SMO141G0153 Selaginella moellendorffii HOM05D002360 ORTHO05D006971 9.5e-23 109.8 63 81.0
Atru.chr3.1763 Acer truncatum HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 77.8
ATR0006G040 Amborella trichopoda HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 81.0
COL.COLO4_35973 Corchorus olitorius HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 76.2
Duzib151G1143 Durio zibethinus HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 77.8
Peaxi162Scf00038g02444 Petunia axillaris HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 77.8
Prupe.1G174100 Prunus persica HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 77.8
Thecc.04G190000 Theobroma cacao HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 79.4
GSVIVG01016650001 Vitis vinifera HOM05D002360 ORTHO05D006971 1.2e-22 109.4 63 77.8
unitig_747.g21723 Utricularia gibba HOM05D002360 ORTHO05D006971 1.6e-22 109.0 63 77.8
VMungo1383G0373 Vigna mungo HOM05D002182 ORTHO05D008382 1.6e-22 109.0 63 77.8
Zm00001eb138980 Zea mays HOM05D001168 ORTHO05D005551 1.6e-22 109.0 63 77.8
MSTRG.10902 Avicennia marina HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 77.8
CSS0024321 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 77.8
CSS0045415 Camellia sinensis var. sinensis HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 77.8
Cpa.g.sc157.3 Carica papaya HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
Cc04_g00540 Coffea canephora HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 79.4
FAN07G1347 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
FAN12G1508 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
FAN17G2355 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
FAN22G0477 Fragaria x ananassa HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
Rhsim12G0213700 Rhododendron simsii HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 76.2
SalBow6G3918 Salvia bowleyana HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 77.8
THA.LOC104822231 Tarenaya hassleriana HOM05D002360 ORTHO05D006971 2.1e-22 108.6 63 79.4
Nitab4.5_0004950g0020 Nicotiana tabacum HOM05D002360 ORTHO05D006971 2.8e-22 108.2 63 77.8
vmacro17066 Vaccinium macrocarpon HOM05D002360 ORTHO05D006971 2.8e-22 108.2 63 76.2
MD04G1023800 Malus domestica HOM05D002360 ORTHO05D006971 3.6e-22 107.8 63 77.8
Nitab4.5_0006338g0050 Nicotiana tabacum HOM05D002360 ORTHO05D006971 3.6e-22 107.8 63 76.2
SGA_v2.0_scaffold4G02100 Striga asiatica HOM05D002360 ORTHO05D006971 3.6e-22 107.8 63 77.8
TPR.G18101 Trifolium pratense HOM05D002360 ORTHO05D006971 3.6e-22 107.8 63 76.2
HPP92_016649 Vanilla planifolia HOM05D002360 ORTHO05D006971 3.6e-22 107.8 63 77.8
Nn6g31492 Nelumbo nucifera HOM05D002360 ORTHO05D006971 4.7e-22 107.5 63 76.2
Potri.014G148700 Populus trichocarpa HOM05D002360 ORTHO05D006971 4.7e-22 107.5 63 74.6
QL06p028316 Quercus lobata HOM05D002360 ORTHO05D006971 4.7e-22 107.5 63 74.6
AagrBONN_evm.TU.Sc2ySwM_368.2776 Anthoceros agrestis HOM05D002360 ORTHO05D006971 6.2e-22 107.1 63 73.0
Glyma.18G003900 Glycine max HOM05D002360 ORTHO05D006971 6.2e-22 107.1 63 76.2
Psat5g097840 Pisum sativum HOM05D002182 ORTHO05D008382 6.2e-22 107.1 63 74.6
PGR083G1913 Punica granatum HOM05D002360 ORTHO05D006971 6.2e-22 107.1 63 74.6
Ca_16437_v3 Cicer arietinum L. HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 74.6
MELO3C017772.2 Cucumis melo HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 74.6
CsaV3_4G002690 Cucumis sativus L. HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 74.6
Gohir.A10G132000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 77.8
Gohir.D10G135000 Gossypium hirsutum HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 77.8
Gorai.011G149900 Gossypium raimondii HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 77.8
Lalb_Chr11g0075841 Lupinus albus HOM05D002360 ORTHO05D006971 8.1e-22 106.7 63 77.8
CiPaw.01G111500 Carya illinoinensis HOM05D002360 ORTHO05D006971 1.8e-21 105.5 63 74.6
FvH4_4g12690 Fragaria vesca HOM05D002360 ORTHO05D006971 1.8e-21 105.5 63 74.6
Lalb_Chr23g0278241 Lupinus albus HOM05D002360 ORTHO05D006971 1.8e-21 105.5 63 76.2
Medtr3g084850 Medicago truncatula HOM05D002360 ORTHO05D006971 1.8e-21 105.5 63 74.6
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.3e-21 105.1 63 73.0
Duzib212G0167 Durio zibethinus HOM05D002360 ORTHO05D006971 2.3e-21 105.1 66 72.7
Glyma.11G253000 Glycine max HOM05D002360 ORTHO05D006971 2.3e-21 105.1 63 74.6
Ciclev10005632m.g Citrus clementina HOM05D002360 ORTHO05D006971 3.1e-21 104.8 63 73.0
Manes.05G193700 Manihot esculenta HOM05D002360 ORTHO05D006971 3.1e-21 104.8 63 73.0
Potri.002G235200 Populus trichocarpa HOM05D002360 ORTHO05D006971 3.1e-21 104.8 63 73.0
Sabra02G0179300 Salix brachista HOM05D002360 ORTHO05D006971 3.1e-21 104.8 63 73.0
TWI63G1808 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 4.0e-21 104.4 63 73.0
arahy.Tifrunner.gnm1.ann1.M5MKEZ Arachis hypogaea HOM05D002360 ORTHO05D006971 6.8e-21 103.6 63 71.4
arahy.Tifrunner.gnm1.ann1.TUF7J0 Arachis hypogaea HOM05D002360 ORTHO05D006971 6.8e-21 103.6 63 71.4
Lj6g0010237 Lotus japonicus HOM05D002360 ORTHO05D006971 8.9e-21 103.2 63 74.6
Sed0014208 Sechium edule HOM05D002360 ORTHO05D006971 8.9e-21 103.2 63 71.4
DCAR_016085 Daucus carota HOM05D002360 ORTHO05D006971 1.2e-20 102.8 59 78.0
Pp3c21_12310 Physcomitrium patens HOM05D002360 ORTHO05D006971 2.0e-20 102.1 63 69.8
TWI38G1596 Tripterygium wilfordii HOM05D002360 ORTHO05D006971 3.4e-20 101.3 63 69.8
TAR375G0345 Trochodendron aralioides HOM05D002360 ORTHO05D006971 9.9e-20 99.8 63 73.0
Hma1.2p1_1104F.1_g257530 Hydrangea macrophylla HOM05D002360 ORTHO05D006971 7.1e-18 93.6 55 76.4
PRCOL_00001058 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 3.5e-17 91.3 62 69.4
CBR_g29276 Chara braunii HOM05D002360 ORTHO05D000002 1.0e-16 89.7 62 66.1
Cre12.g509650 Chlamydomonas reinhardtii HOM05D002360 ORTHO05D006971 2.5e-15 85.1 62 62.9
MCO04G494 Micromonas commoda HOM05D002360 ORTHO05D006971 8.1e-14 80.1 70 58.6
MCO15G399 Micromonas commoda HOM05D002360 ORTHO05D006971 1.3e-11 72.8 73 54.8
SGA_v2.0_scaffold37G14644 Striga asiatica HOM05D002360 ORTHO05D006971 2.9e-11 71.6 54 57.4
PRCOL_00001572 Prasinoderma coloniale HOM05D002360 ORTHO05D006971 4.9e-11 70.9 72 51.4
Zm00001eb090710 Zea mays HOM05D004882 ORTHO05D005551 1.9e-10 68.9 39 76.9
Zm00001eb145010 Zea mays HOM05D002780 ORTHO05D005551 1.9e-10 68.9 39 76.9
Zm00001eb224580 Zea mays HOM05D004882 ORTHO05D006702 1.9e-10 68.9 39 76.9
SGA_v2.0_scaffold32G13108 Striga asiatica HOM05D002360 ORTHO05D406359 4.7e-06 54.3 40 62.5


User provided reference genes

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