Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04192 Sequoiadendron giganteum HOM05D002112 ORTHO05D384887 6.2e-143 510.8 256 100.0
SEGI_07155 Sequoiadendron giganteum HOM05D002112 ORTHO05D005830 9.4e-14 81.6 60 75.0
RcHm_v2.0_Chr2g0118821 Rosa chinensis HOM05D002112 ORTHO05D005830 1.8e-09 67.4 60 58.3
Dinv17874 Davidia involucrata HOM05D002112 ORTHO05D005830 5.3e-09 65.9 57 59.6
Haze_01451 Corylus avellana HOM05D002112 ORTHO05D005830 6.9e-09 65.5 62 56.5
Dinv21066 Davidia involucrata HOM05D002112 ORTHO05D005830 6.9e-09 65.5 57 59.6
QL10p051275 Quercus lobata HOM05D002112 ORTHO05D005830 6.9e-09 65.5 62 56.5
Aqoxy7G04120 Aquilegia oxysepala HOM05D002112 ORTHO05D005830 9.1e-09 65.1 60 58.3
CiPaw.01G095700 Carya illinoinensis HOM05D002112 ORTHO05D005830 9.1e-09 65.1 62 56.5
SMO356G0377 Selaginella moellendorffii HOM05D002112 ORTHO05D005830 9.1e-09 65.1 65 50.8
Atru.chr4.1269 Acer truncatum HOM05D002112 ORTHO05D005830 1.2e-08 64.7 60 58.3
Thhalv10020922m.g Eutrema salsugineum HOM05D002112 ORTHO05D005830 2.0e-08 63.9 60 56.7
GSVIVG01010853001 Vitis vinifera HOM05D002112 ORTHO05D005830 2.0e-08 63.9 60 56.7
Glyma.13G074600 Glycine max HOM05D002112 ORTHO05D005830 2.6e-08 63.5 60 55.0
Ca_04336_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 3.4e-08 63.2 60 55.0
Lj6g0007258 Lotus japonicus HOM05D002112 ORTHO05D005830 4.5e-08 62.8 60 53.3
Solyc02g082030.3 Solanum lycopersicum HOM05D002112 ORTHO05D005830 5.9e-08 62.4 60 51.7
Sopen02g026670 Solanum pennellii HOM05D002112 ORTHO05D005830 5.9e-08 62.4 60 51.7
PGSC0003DMG400007324 Solanum tuberosum HOM05D002112 ORTHO05D005830 5.9e-08 62.4 60 51.7
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 7.7e-08 62.0 60 55.0
TWI38G0996 Tripterygium wilfordii HOM05D002112 ORTHO05D005830 7.7e-08 62.0 60 53.3
unitig_748.g7486 Utricularia gibba HOM05D002112 ORTHO05D005830 7.7e-08 62.0 61 47.5
Ciclev10020598m.g Citrus clementina HOM05D002112 ORTHO05D005830 1.0e-07 61.6 60 51.7
Sp3g18350 Schrenkiella parvula HOM05D002112 ORTHO05D005830 1.0e-07 61.6 60 55.0
AL3G34040 Arabidopsis lyrata HOM05D002112 ORTHO05D005830 1.3e-07 61.2 60 55.0
MELO3C015704.2 Cucumis melo HOM05D002112 ORTHO05D005830 1.3e-07 61.2 62 53.2
Manes.04G047300 Manihot esculenta HOM05D002112 ORTHO05D005830 1.3e-07 61.2 60 53.3
Oeu037772.1 Olea europaea HOM05D002112 ORTHO05D005830 1.7e-07 60.8 53 56.6
TAR623G1172 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.7e-07 60.8 60 53.3
CARHR095970 Cardamine hirsuta HOM05D002112 ORTHO05D005830 2.2e-07 60.5 62 54.8
Duzib151G0469 Durio zibethinus HOM05D002112 ORTHO05D005830 2.2e-07 60.5 92 42.4
Glyma.20G048400 Glycine max HOM05D002112 ORTHO05D005830 2.2e-07 60.5 60 51.7
Lalb_Chr17g0347631 Lupinus albus HOM05D002112 ORTHO05D005830 2.2e-07 60.5 63 50.8
Phvul.008G205800 Phaseolus vulgaris HOM05D002112 ORTHO05D005830 2.2e-07 60.5 60 51.7
Carub.0003s2027 Capsella rubella HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 53.3
DCAR_007772 Daucus carota HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 53.3
Glyma.14G040300 Glycine max HOM05D002112 ORTHO05D005830 2.9e-07 60.1 65 47.7
Lj2A342T117 Lonicera japonica HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 53.3
Psat2g021160 Pisum sativum HOM05D002112 ORTHO05D005830 2.9e-07 60.1 65 49.2
Sabra17G0015800 Salix brachista HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 53.3
Sc19g0002800 Simmondsia chinensis HOM05D002112 ORTHO05D005830 2.9e-07 60.1 65 50.8
VMungo0540G0891 Vigna mungo HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 51.7
VMungo0647G1998 Vigna mungo HOM05D002112 ORTHO05D005830 2.9e-07 60.1 60 51.7
BcaC05g28317 Brassica carinata HOM05D002112 ORTHO05D005377 3.8e-07 59.7 60 53.3
A05p28600 Brassica napus HOM05D002112 ORTHO05D005377 3.8e-07 59.7 60 53.3
C05p44010 Brassica napus HOM05D002112 ORTHO05D005377 3.8e-07 59.7 60 53.3
BolC5t33124H Brassica oleracea HOM05D002112 ORTHO05D005830 3.8e-07 59.7 60 53.3
BraA05t21737Z Brassica rapa HOM05D002112 ORTHO05D005377 3.8e-07 59.7 60 53.3
MBI14_g20102_MAGBIO Magnolia biondii HOM05D002112 ORTHO05D005830 3.8e-07 59.7 58 53.4
Nitab4.5_0003902g0080 Nicotiana tabacum HOM05D002112 ORTHO05D005830 3.8e-07 59.7 60 48.3
PSO151G0006 Papaver somniferum HOM05D002112 ORTHO05D005830 3.8e-07 59.7 60 50.0
PSO339G3553 Papaver somniferum HOM05D002112 ORTHO05D005830 3.8e-07 59.7 60 50.0
Prupe.1G198700 Prunus persica HOM05D002112 ORTHO05D005830 3.8e-07 59.7 60 51.7
CAN.G809.29 Capsicum annuum HOM05D002112 ORTHO05D005830 5.0e-07 59.3 60 46.7
Nitab4.5_0000632g0010 Nicotiana tabacum HOM05D002112 ORTHO05D005830 5.0e-07 59.3 60 48.3
Oeu010464.1 Olea europaea HOM05D002112 ORTHO05D005830 6.5e-07 58.9 53 54.7
Sabra17G0000800 Salix brachista HOM05D002112 ORTHO05D005830 8.5e-07 58.5 60 51.7
ECA246G0582 Erigeron canadensis HOM05D002112 ORTHO05D005830 1.1e-06 58.2 60 48.3
Peaxi162Scf00036g02120 Petunia axillaris HOM05D002112 ORTHO05D005830 1.4e-06 57.8 60 48.3
Ca_06168_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.9e-06 57.4 65 44.6
Ca_06185_v3 Cicer arietinum L. HOM05D002112 ORTHO05D005830 1.9e-06 57.4 65 44.6
Migut.M02025 Erythranthe guttata HOM05D002112 ORTHO05D005830 1.9e-06 57.4 60 50.0
TAR369G0031 Trochodendron aralioides HOM05D002112 ORTHO05D005830 1.9e-06 57.4 60 50.0
ATR0559G336 Amborella trichopoda HOM05D002112 ORTHO05D005830 2.5e-06 57.0 60 46.7
vmacro12410 Vaccinium macrocarpon HOM05D002112 ORTHO05D005830 2.5e-06 57.0 60 53.3
HanXRQChr02g0033051 Helianthus annuus HOM05D002112 ORTHO05D005830 3.2e-06 56.6 60 45.0
HanXRQChr12g0380031 Helianthus annuus HOM05D002112 ORTHO05D005830 3.2e-06 56.6 60 46.7
TPR.G11324 Trifolium pratense HOM05D002112 ORTHO05D005830 4.2e-06 56.2 65 44.6
QL11p031638 Quercus lobata HOM05D002112 ORTHO05D005830 5.5e-06 55.8 60 45.0
Medtr5g088340 Medicago truncatula HOM05D002112 ORTHO05D005830 7.2e-06 55.5 65 43.1
arahy.Tifrunner.gnm1.ann1.9N9T88 Arachis hypogaea HOM05D002112 ORTHO05D005830 9.4e-06 55.1 60 46.7
arahy.Tifrunner.gnm1.ann1.PNXW1P Arachis hypogaea HOM05D002112 ORTHO05D005830 9.4e-06 55.1 60 46.7
CANSAT78G1637 Cannabis sativa HOM05D002112 ORTHO05D005830 9.4e-06 55.1 60 51.7


User provided reference genes

Program Settings