Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.5e-55 218.4 98 100.0
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 1.3e-48 196.1 94 89.4
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 1.7e-48 195.7 94 87.2
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.2e-48 195.3 94 88.3
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 3.8e-48 194.5 94 88.3
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 3.8e-48 194.5 94 88.3
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 3.8e-48 194.5 94 88.3
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 5.0e-48 194.1 94 87.2
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 5.0e-48 194.1 94 85.1
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 5.0e-48 194.1 94 87.2
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 8.4e-48 193.4 94 85.1
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 1.1e-47 193.0 94 85.1
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 1.4e-47 192.6 94 86.2
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 1.9e-47 192.2 94 87.2
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.9e-47 192.2 94 84.0
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 2.5e-47 191.8 94 86.2
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 2.5e-47 191.8 94 86.2
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 2.5e-47 191.8 94 86.2
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 3.2e-47 191.4 94 85.1
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 3.2e-47 191.4 94 84.0
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 3.2e-47 191.4 94 86.2
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 3.2e-47 191.4 94 87.2
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 3.2e-47 191.4 94 86.2
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 4.2e-47 191.0 94 86.2
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 4.2e-47 191.0 94 86.2
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 4.2e-47 191.0 94 86.2
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 5.5e-47 190.7 94 85.1
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 7.1e-47 190.3 94 84.0
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 7.1e-47 190.3 94 86.2
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 7.1e-47 190.3 94 86.2
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 7.1e-47 190.3 94 83.0
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 9.3e-47 189.9 94 86.2
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 1.6e-46 189.1 94 84.0
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 2.1e-46 188.7 94 85.1
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 2.7e-46 188.3 94 85.1
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 2.7e-46 188.3 94 85.1
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 2.7e-46 188.3 94 83.0
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 2.7e-46 188.3 94 83.0
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 3.5e-46 188.0 94 84.0
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 3.5e-46 188.0 92 85.9
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 3.5e-46 188.0 94 84.0
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 3.5e-46 188.0 94 83.0
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 4.6e-46 187.6 94 81.9
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 4.6e-46 187.6 94 85.1
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 4.6e-46 187.6 94 83.0
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 6.1e-46 187.2 94 83.0
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 6.1e-46 187.2 94 83.0
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 6.1e-46 187.2 95 82.1
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 7.9e-46 186.8 94 85.1
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 7.9e-46 186.8 94 85.1
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 7.9e-46 186.8 94 84.0
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 1.0e-45 186.4 93 86.0
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 1.0e-45 186.4 94 84.0
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 1.0e-45 186.4 97 82.5
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 1.0e-45 186.4 94 84.0
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 1.0e-45 186.4 94 84.0
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 1.0e-45 186.4 94 85.1
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 1.3e-45 186.0 96 82.3
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 1.3e-45 186.0 96 82.3
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 1.3e-45 186.0 92 83.7
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 1.3e-45 186.0 92 84.8
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 1.3e-45 186.0 93 84.9
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 1.3e-45 186.0 94 84.0
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 1.3e-45 186.0 94 79.8
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 1.8e-45 185.7 96 81.2
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 1.8e-45 185.7 94 83.0
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 1.8e-45 185.7 94 83.0
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 2.3e-45 185.3 93 83.9
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 2.3e-45 185.3 94 81.9
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 2.3e-45 185.3 96 81.2
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 2.3e-45 185.3 94 83.0
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 2.3e-45 185.3 96 82.3
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 2.3e-45 185.3 93 84.9
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 2.3e-45 185.3 94 81.9
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 3.0e-45 184.9 94 83.0
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 3.0e-45 184.9 92 84.8
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 3.0e-45 184.9 94 81.9
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 3.9e-45 184.5 94 80.9
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 6.7e-45 183.7 96 79.2
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 8.7e-45 183.3 94 80.9
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 1.1e-44 183.0 96 80.2
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 1.5e-44 182.6 94 79.8
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 1.5e-44 182.6 96 81.2
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 5.7e-44 180.6 94 80.9
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 5.7e-44 180.6 96 79.2
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 7.4e-44 180.3 94 79.8
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 7.4e-44 180.3 93 83.9
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 6.3e-43 177.2 93 80.6
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 1.1e-42 176.4 94 77.7
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 1.8e-42 175.6 99 74.7
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 6.9e-42 173.7 90 82.2
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 1.7e-40 169.1 94 75.5
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 5.1e-37 157.5 91 69.2
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 8.8e-37 156.8 86 75.6
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 8.8e-37 156.8 94 75.5
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 1.1e-36 156.4 93 67.7
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 2.4e-34 148.7 80 76.2
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 3.2e-31 138.3 67 86.6
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 7.9e-30 133.7 67 82.1
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 6.7e-29 130.6 81 70.4
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 7.7e-25 117.1 51 94.1
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 7.7e-25 117.1 94 61.7
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 1.0e-24 116.7 94 60.6
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 1.3e-24 116.3 95 60.0
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 8.5e-24 113.6 51 90.2
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 5.2e-21 104.4 47 89.4
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 5.0e-16 87.8 85 49.4
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 3.6e-14 81.6 45 75.6


User provided reference genes

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