Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_03475 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 5.2e-67 257.7 140 100.0
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 5.1e-14 81.6 58 65.5
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 8.7e-14 80.9 58 63.8
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 1.9e-13 79.7 59 62.7
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 2.5e-13 79.3 58 62.1
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 2.5e-13 79.3 59 62.7
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 3.3e-13 79.0 58 65.5
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 3.3e-13 79.0 58 63.8
Sc17g0006240 Simmondsia chinensis HOM05D005098 ORTHO05D006646 3.3e-13 79.0 58 60.3
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 5.7e-13 78.2 59 59.3
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 5.7e-13 78.2 59 59.3
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 5.7e-13 78.2 59 61.0
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 5.7e-13 78.2 58 62.1
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 7.4e-13 77.8 58 60.3
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 7.4e-13 77.8 58 62.1
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 9.6e-13 77.4 58 58.6
GSVIVG01002018001 Vitis vinifera HOM05D005098 ORTHO05D006646 9.6e-13 77.4 58 60.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.3e-12 77.0 58 62.1
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 1.3e-12 77.0 58 60.3
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 1.3e-12 77.0 59 57.6
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 1.3e-12 77.0 59 57.6
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 1.3e-12 77.0 65 56.9
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 1.6e-12 76.6 58 56.9
Dinv07544 Davidia involucrata HOM05D005098 ORTHO05D006646 1.6e-12 76.6 58 63.8
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 1.6e-12 76.6 58 62.1
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.6e-12 76.6 58 62.1
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.6e-12 76.6 58 62.1
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 2.1e-12 76.3 59 57.6
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 2.1e-12 76.3 58 56.9
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.1e-12 76.3 58 56.9
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 2.1e-12 76.3 58 58.6
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 2.1e-12 76.3 58 58.6
Sed0003361 Sechium edule HOM05D005098 ORTHO05D006646 2.1e-12 76.3 58 60.3
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 2.1e-12 76.3 60 60.0
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 2.8e-12 75.9 58 62.1
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 2.8e-12 75.9 58 60.3
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 2.8e-12 75.9 58 56.9
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.8e-12 75.9 58 56.9
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.8e-12 75.9 58 56.9
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 2.8e-12 75.9 59 57.6
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
Aqoxy3G01806 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 3.7e-12 75.5 57 61.4
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 60.3
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 60.3
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 60.3
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 3.7e-12 75.5 58 58.6
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 4.8e-12 75.1 58 56.9
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 4.8e-12 75.1 58 56.9
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 4.8e-12 75.1 60 60.0
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 4.8e-12 75.1 58 60.3
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 4.8e-12 75.1 57 59.6
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 6.3e-12 74.7 58 58.6
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 6.3e-12 74.7 58 56.9
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 6.3e-12 74.7 58 58.6
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 6.3e-12 74.7 58 58.6
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 8.2e-12 74.3 58 58.6
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 8.2e-12 74.3 58 58.6
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 8.2e-12 74.3 58 60.3
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 8.2e-12 74.3 58 62.1
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 8.2e-12 74.3 61 55.7
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 8.2e-12 74.3 58 55.2
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 1.1e-11 73.9 58 58.6
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 1.1e-11 73.9 58 58.6
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 1.1e-11 73.9 59 57.6
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 56.9
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 56.9
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 56.9
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 55.2
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 1.4e-11 73.6 61 54.1
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 55.2
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 1.4e-11 73.6 58 58.6
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 1.8e-11 73.2 58 56.9
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 1.8e-11 73.2 58 53.4
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 1.8e-11 73.2 58 53.4
Ciclev10009035m.g Citrus clementina HOM05D005098 ORTHO05D006646 1.8e-11 73.2 63 54.0
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 1.8e-11 73.2 59 57.6
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 1.8e-11 73.2 59 57.6
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 1.8e-11 73.2 59 55.9
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 2.4e-11 72.8 58 56.9
MELO3C007290.2 Cucumis melo HOM05D005098 ORTHO05D006646 2.4e-11 72.8 58 58.6
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 2.4e-11 72.8 58 56.9
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
BolC1t02496H Brassica oleracea HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 55.2
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 3.1e-11 72.4 59 54.2
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 56.9
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 53.4
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 3.1e-11 72.4 58 53.4
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 3.1e-11 72.4 56 60.7
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 4.1e-11 72.0 59 55.9
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 5.3e-11 71.6 58 58.6
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 5.3e-11 71.6 61 54.1
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 6.9e-11 71.2 57 57.9
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 2.0e-10 69.7 58 56.9
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 2.0e-10 69.7 58 56.9
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 2.0e-10 69.7 58 56.9
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis HOM05D005098 ORTHO05D006646 2.6e-10 69.3 61 52.5
arahy.Tifrunner.gnm1.ann1.MC3R28 Arachis hypogaea HOM05D005098 ORTHO05D006646 5.9e-10 68.2 59 50.8
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 1.3e-09 67.0 52 59.6
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 1.4e-08 63.5 68 44.1
SEGI_35715 Sequoiadendron giganteum HOM05D001068 ORTHO05D003481 2.5e-08 62.8 43 86.0
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 3.0e-06 55.8 56 48.2
SEGI_18568 Sequoiadendron giganteum HOM05D013614 ORTHO05D000007 3.9e-06 55.5 29 96.6
SEGI_20747 Sequoiadendron giganteum HOM05D013614 ORTHO05D000007 3.9e-06 55.5 29 96.6
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 6.7e-06 54.7 62 45.2


User provided reference genes

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