Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02913 Sequoiadendron giganteum HOM05D006373 ORTHO05D008145 4.5e-183 644.4 322 100.0
Pp3c12_11380 Physcomitrium patens HOM05D006373 ORTHO05D008145 1.2e-34 151.4 282 32.3
ATR0757G016 Amborella trichopoda HOM05D006373 ORTHO05D008145 5.1e-33 146.0 261 36.4
Cfa004178 Carpinus fangiana HOM05D006373 ORTHO05D008145 6.6e-33 145.6 268 36.6
QL08p050698 Quercus lobata HOM05D006373 ORTHO05D008145 6.6e-33 145.6 276 35.5
Mapoly0022s0105 Marchantia polymorpha HOM05D006373 ORTHO05D008145 1.5e-32 144.4 264 35.2
Dinv32419 Davidia involucrata HOM05D006373 ORTHO05D008145 3.3e-32 143.3 280 32.1
Haze_15231 Corylus avellana HOM05D006373 ORTHO05D008145 4.3e-32 142.9 271 36.5
Rhsim01G0155400 Rhododendron simsii HOM05D006373 ORTHO05D008145 9.6e-32 141.7 280 32.9
Lj7A521G13 Lonicera japonica HOM05D006373 ORTHO05D008145 1.3e-31 141.4 277 34.3
Oeu059230.1 Olea europaea HOM05D006373 ORTHO05D008145 2.8e-31 140.2 282 36.2
Eucgr.E00282 Eucalyptus grandis HOM05D006373 ORTHO05D008145 3.6e-31 139.8 272 34.9
Actinidia33446 Actinidia chinensis HOM05D006373 ORTHO05D008145 8.1e-31 138.7 274 31.8
FAN10G2811 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.4e-30 137.9 252 34.5
MD07G1125800 Malus domestica HOM05D006373 ORTHO05D008145 1.4e-30 137.9 261 35.6
Nitab4.5_0010430g0020 Nicotiana tabacum HOM05D006373 ORTHO05D008145 2.4e-30 137.1 265 32.1
RcHm_v2.0_Chr1g0352131 Rosa chinensis HOM05D006373 ORTHO05D008145 3.1e-30 136.7 275 34.2
Cc02_g37210 Coffea canephora HOM05D006373 ORTHO05D008145 5.3e-30 136.0 268 34.7
Nn6g34269 Nelumbo nucifera HOM05D006373 ORTHO05D008145 5.3e-30 136.0 258 36.4
vmacro20974 Vaccinium macrocarpon HOM05D006373 ORTHO05D008145 5.3e-30 136.0 281 31.0
Hma1.2p1_0068F.1_g037130 Hydrangea macrophylla HOM05D006373 ORTHO05D008145 9.0e-30 135.2 273 31.5
FAN10G3773 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.5e-29 134.4 252 34.1
MBI12_g11810_MAGBIO Magnolia biondii HOM05D006373 ORTHO05D008145 1.5e-29 134.4 284 32.7
CiPaw.02G024800 Carya illinoinensis HOM05D006373 ORTHO05D008145 3.4e-29 133.3 261 36.0
Nitab4.5_0004550g0010 Nicotiana tabacum HOM05D006373 ORTHO05D008145 4.5e-29 132.9 256 32.4
PSO478G1066 Papaver somniferum HOM05D006373 ORTHO05D008145 4.5e-29 132.9 254 33.5
Os09g0521900 Oryza sativa ssp. japonica HOM05D006373 ORTHO05D008145 7.6e-29 132.1 276 33.3
FAN03G2318 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.3e-28 131.3 252 34.9
Medtr7g076290 Medicago truncatula HOM05D006373 ORTHO05D008145 1.3e-28 131.3 282 33.0
Cpa.g.sc57.89 Carica papaya HOM05D006373 ORTHO05D008145 1.7e-28 131.0 280 32.9
FAN06G4951 Fragaria x ananassa HOM05D006373 ORTHO05D008145 1.7e-28 131.0 256 34.4
Atru.chr5.401 Acer truncatum HOM05D006373 ORTHO05D008145 2.2e-28 130.6 280 33.2
FAN01G2011 Fragaria x ananassa HOM05D006373 ORTHO05D008145 2.2e-28 130.6 252 35.3
FAN06G0518 Fragaria x ananassa HOM05D006373 ORTHO05D008145 2.2e-28 130.6 256 34.4
GSVIVG01027599001 Vitis vinifera HOM05D006373 ORTHO05D008145 2.2e-28 130.6 267 32.2
FvH4_7g12990 Fragaria vesca HOM05D006373 ORTHO05D008145 2.9e-28 130.2 256 34.4
PSO782G5614 Papaver somniferum HOM05D006373 ORTHO05D008145 4.9e-28 129.4 252 32.9
Psat3g112440 Pisum sativum HOM05D006373 ORTHO05D008145 4.9e-28 129.4 274 33.2
SalBow3G0067 Salvia bowleyana HOM05D006373 ORTHO05D008145 4.9e-28 129.4 267 31.1
arahy.Tifrunner.gnm1.ann1.V9KE7M Arachis hypogaea HOM05D006373 ORTHO05D008145 6.4e-28 129.0 274 33.9
Peaxi162Scf00021g00529 Petunia axillaris HOM05D006373 ORTHO05D008145 6.4e-28 129.0 270 31.5
MSTRG.20789 Avicennia marina HOM05D006373 ORTHO05D008145 1.4e-27 127.9 267 32.6
Prupe.2G154000 Prunus persica HOM05D006373 ORTHO05D008145 2.4e-27 127.1 269 32.7
Sabra14G0055000 Salix brachista HOM05D006373 ORTHO05D008145 2.4e-27 127.1 222 33.8
Sc23g0003310 Simmondsia chinensis HOM05D006373 ORTHO05D008145 2.4e-27 127.1 262 32.4
PGR042G0347 Punica granatum HOM05D006373 ORTHO05D008145 4.2e-27 126.3 278 33.8
Solyc01g091820.3 Solanum lycopersicum HOM05D006373 ORTHO05D008145 4.2e-27 126.3 261 29.5
DCAR_025171 Daucus carota HOM05D006373 ORTHO05D008145 7.1e-27 125.6 278 29.9
Hund27327 Selenicereus undatus HOM05D006373 ORTHO05D008145 9.3e-27 125.2 269 32.0
Glyma.18G228000 Glycine max HOM05D006373 ORTHO05D008145 1.2e-26 124.8 254 32.3
Phvul.008G070200 Phaseolus vulgaris HOM05D006373 ORTHO05D008145 1.2e-26 124.8 273 33.3
TPR.G37746 Trifolium pratense HOM05D006373 ORTHO05D008145 1.2e-26 124.8 273 33.3
Manes.01G262700 Manihot esculenta HOM05D006373 ORTHO05D008145 7.9e-26 122.1 278 31.7
CSS0009190 Camellia sinensis var. sinensis HOM05D006373 ORTHO05D008145 1.8e-25 120.9 279 30.5
Ciclev10019320m.g Citrus clementina HOM05D006373 ORTHO05D008145 1.8e-25 120.9 263 35.4
Thecc.01G369000 Theobroma cacao HOM05D006373 ORTHO05D008145 2.3e-25 120.6 281 32.4
TPR.G33172 Trifolium pratense HOM05D006373 ORTHO05D008145 2.3e-25 120.6 278 32.0
PGSC0003DMG400017049 Solanum tuberosum HOM05D006373 ORTHO05D008145 3.0e-25 120.2 251 29.9
Sopen01g037590 Solanum pennellii HOM05D006373 ORTHO05D008145 3.9e-25 119.8 266 28.6
CAN.G170.53 Capsicum annuum HOM05D006373 ORTHO05D008145 8.7e-25 118.6 254 29.9
CsaV3_6G005860 Cucumis sativus L. HOM05D006373 ORTHO05D008145 8.7e-25 118.6 289 30.8
Lj1g0016698 Lotus japonicus HOM05D006373 ORTHO05D008145 8.7e-25 118.6 276 33.7
HanXRQChr03g0093561 Helianthus annuus HOM05D006373 ORTHO05D008145 1.5e-24 117.9 271 31.0
TWI59G0120 Tripterygium wilfordii HOM05D006373 ORTHO05D008145 5.6e-24 115.9 277 31.4
SGA_v2.0_scaffold153G37065 Striga asiatica HOM05D006373 ORTHO05D008145 7.4e-24 115.5 251 30.7
Duzib133G1433 Durio zibethinus HOM05D006373 ORTHO05D008145 9.6e-24 115.2 273 33.0
Ca_07867_v3 Cicer arietinum L. HOM05D006373 ORTHO05D008145 2.8e-23 113.6 259 31.3
COL.COLO4_06964 Corchorus olitorius HOM05D006373 ORTHO05D008145 2.8e-23 113.6 263 33.1
Glyma.09G264000 Glycine max HOM05D006373 ORTHO05D008145 3.6e-23 113.2 254 31.1
arahy.Tifrunner.gnm1.ann1.TZ2CHG Arachis hypogaea HOM05D006373 ORTHO05D008145 4.8e-23 112.8 313 28.8
HPP92_004956 Vanilla planifolia HOM05D006373 ORTHO05D008145 4.8e-23 112.8 278 28.4
ClCG06G000110 Citrullus lanatus HOM05D006373 ORTHO05D008145 6.2e-23 112.5 276 29.3
Sed0002578 Sechium edule HOM05D006373 ORTHO05D008145 8.1e-23 112.1 258 32.9
CANSAT56G4468 Cannabis sativa HOM05D006373 ORTHO05D008145 1.4e-22 111.3 263 30.4
VMungo1383G2252 Vigna mungo HOM05D006373 ORTHO05D008145 1.4e-22 111.3 273 32.6
Aa31LG1G11190 Aethionema arabicum HOM05D006373 ORTHO05D008145 2.4e-22 110.5 246 31.3
Migut.B01684 Erythranthe guttata HOM05D006373 ORTHO05D008145 3.1e-22 110.2 224 32.1
ECA240G2884 Erigeron canadensis HOM05D006373 ORTHO05D008145 5.3e-22 109.4 271 31.0
Zm00001eb318880 Zea mays HOM05D006373 ORTHO05D008145 9.0e-22 108.6 269 31.6
TAR375G0714 Trochodendron aralioides HOM05D006373 ORTHO05D008145 1.5e-21 107.8 137 40.9
EL10Ac1g00966 Beta vulgaris HOM05D006373 ORTHO05D008145 2.0e-21 107.5 224 32.1
Aqoxy7G00462 Aquilegia oxysepala HOM05D006373 ORTHO05D008145 5.8e-21 105.9 320 27.2
Gohir.A08G129300 Gossypium hirsutum HOM05D006373 ORTHO05D008145 9.9e-21 105.1 268 32.1
Gorai.004G156300 Gossypium raimondii HOM05D006373 ORTHO05D008145 9.9e-21 105.1 260 31.5
Lalb_Chr01g0021121 Lupinus albus HOM05D006373 ORTHO05D008145 9.9e-21 105.1 217 31.8
Lsat_1_v5_gn_3_135660 Lactuca sativa HOM05D006373 ORTHO05D008145 1.7e-20 104.4 281 30.2
Thhalv10007143m.g Eutrema salsugineum HOM05D006373 ORTHO05D008145 6.4e-20 102.4 255 31.4
Gohir.D08G150600 Gossypium hirsutum HOM05D006373 ORTHO05D008145 8.4e-20 102.1 271 31.0
AUR62033368 Chenopodium quinoa HOM05D006373 ORTHO05D008145 1.1e-19 101.7 254 29.9
SMO351G0379 Selaginella moellendorffii HOM05D006373 ORTHO05D008145 1.9e-19 100.9 214 34.1
Sp1g00420 Schrenkiella parvula HOM05D006373 ORTHO05D008145 2.4e-19 100.5 265 27.9
Carub.0001s0035 Capsella rubella HOM05D006373 ORTHO05D008145 7.1e-19 99.0 247 27.9
SHI25520 Sapria himalayana HOM05D006373 ORTHO05D008145 2.7e-18 97.1 220 32.7
THA.LOC104801460 Tarenaya hassleriana HOM05D006373 ORTHO05D008145 1.0e-17 95.1 270 30.7
MELO3C022527.2 Cucumis melo HOM05D006373 ORTHO05D008145 3.8e-12 76.6 184 32.6


User provided reference genes

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