Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_02195 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 6.6e-75 283.9 136 100.0
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 2.1e-28 129.4 106 58.5
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 2.7e-28 129.0 106 57.5
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.6e-28 128.3 106 56.6
TAR365G0272 Trochodendron aralioides HOM05D006708 ORTHO05D008321 7.9e-28 127.5 102 57.8
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 1.0e-27 127.1 102 59.8
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 1.0e-27 127.1 102 59.8
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 1.0e-27 127.1 100 59.0
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 2.3e-27 125.9 106 57.5
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 3.0e-27 125.6 102 58.8
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 3.9e-27 125.2 102 56.9
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 5.1e-27 124.8 102 55.9
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 6.7e-27 124.4 102 57.8
Aqoxy2G02504 Aquilegia oxysepala HOM05D006708 ORTHO05D008321 8.7e-27 124.0 103 61.2
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 8.7e-27 124.0 103 56.3
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 8.7e-27 124.0 103 57.3
Cfa014219 Carpinus fangiana HOM05D006708 ORTHO05D008321 1.1e-26 123.6 103 58.3
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 2.5e-26 122.5 102 57.8
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 3.3e-26 122.1 102 54.9
PSO210G5816 Papaver somniferum HOM05D006708 ORTHO05D008321 5.7e-26 121.3 103 56.3
PSO761G0290 Papaver somniferum HOM05D006708 ORTHO05D008321 5.7e-26 121.3 103 56.3
QL06p014362 Quercus lobata HOM05D006708 ORTHO05D008321 5.7e-26 121.3 102 57.8
Atru.chr4.3165 Acer truncatum HOM05D006708 ORTHO05D008321 9.7e-26 120.6 103 55.3
COL.COLO4_34511 Corchorus olitorius HOM05D006708 ORTHO05D008321 1.3e-25 120.2 102 57.8
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 1.3e-25 120.2 102 55.9
Oeu022711.1 Olea europaea HOM05D006708 ORTHO05D008321 1.3e-25 120.2 98 58.2
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 1.6e-25 119.8 103 53.4
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 1.6e-25 119.8 102 56.9
Phvul.003G122200 Phaseolus vulgaris HOM05D006708 ORTHO05D008321 1.6e-25 119.8 101 54.5
Duzib151G0010 Durio zibethinus HOM05D006708 ORTHO05D008321 2.2e-25 119.4 103 56.3
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 2.2e-25 119.4 101 55.4
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 2.8e-25 119.0 103 55.3
GSVIVG01017693001 Vitis vinifera HOM05D006708 ORTHO05D008321 2.8e-25 119.0 102 56.9
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 4.8e-25 118.2 103 56.3
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 4.8e-25 118.2 103 60.2
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 6.3e-25 117.9 96 59.4
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 8.2e-25 117.5 106 51.9
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 1.1e-24 117.1 101 53.5
A03p34980 Brassica napus HOM05D006708 ORTHO05D008321 1.4e-24 116.7 103 53.4
BraA03t12678Z Brassica rapa HOM05D006708 ORTHO05D008321 1.4e-24 116.7 103 53.4
Gohir.A02G058800 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.8e-24 116.3 103 54.4
Gohir.D02G064500 Gossypium hirsutum HOM05D006708 ORTHO05D008321 1.8e-24 116.3 103 54.4
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 2.4e-24 115.9 97 56.7
PGR031G3511 Punica granatum HOM05D006708 ORTHO05D008321 2.4e-24 115.9 103 55.3
Sed0006346 Sechium edule HOM05D006708 ORTHO05D008321 2.4e-24 115.9 103 52.4
Dinv29501 Davidia involucrata HOM05D006708 ORTHO05D008321 3.1e-24 115.5 103 54.4
MELO3C021228.2 Cucumis melo HOM05D006708 ORTHO05D008321 4.1e-24 115.2 103 53.4
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 4.1e-24 115.2 103 52.4
THA.LOC104802685 Tarenaya hassleriana HOM05D006708 ORTHO05D008321 4.1e-24 115.2 103 54.4
CSS0021077 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 5.3e-24 114.8 101 54.5
Cc03_g00080 Coffea canephora HOM05D006708 ORTHO05D008321 5.3e-24 114.8 99 53.5
unitig_1.g29359 Utricularia gibba HOM05D006708 ORTHO05D008321 6.9e-24 114.4 101 55.4
Gorai.005G073000 Gossypium raimondii HOM05D006708 ORTHO05D008321 9.0e-24 114.0 103 53.4
Manes.03G212000 Manihot esculenta HOM05D006708 ORTHO05D008321 9.0e-24 114.0 104 55.8
Sp3g05900 Schrenkiella parvula HOM05D006708 ORTHO05D008321 9.0e-24 114.0 103 50.5
C03p42560 Brassica napus HOM05D006708 ORTHO05D008321 1.2e-23 113.6 103 51.5
BolC3t16526H Brassica oleracea HOM05D006708 ORTHO05D008321 1.2e-23 113.6 103 51.5
AUR62029962 Chenopodium quinoa HOM05D006708 ORTHO05D008321 1.2e-23 113.6 102 51.0
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 1.5e-23 113.2 101 52.5
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 2.0e-23 112.8 101 52.5
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 2.0e-23 112.8 101 52.5
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 2.6e-23 112.5 101 52.5
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 3.4e-23 112.1 101 51.5
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 3.4e-23 112.1 103 53.4
Thecc.04G313500 Theobroma cacao HOM05D006708 ORTHO05D008321 3.4e-23 112.1 103 53.4
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 4.5e-23 111.7 96 55.2
Haze_12609 Corylus avellana HOM05D006708 ORTHO05D008321 5.9e-23 111.3 100 54.0
Haze_12620 Corylus avellana HOM05D006708 ORTHO05D008321 5.9e-23 111.3 100 54.0
MSTRG.24854 Avicennia marina HOM05D006708 ORTHO05D008321 2.2e-22 109.4 98 56.1
Thhalv10022298m.g Eutrema salsugineum HOM05D006708 ORTHO05D008321 3.8e-22 108.6 103 48.5
DCAR_023411 Daucus carota HOM05D006708 ORTHO05D008321 6.5e-22 107.8 96 53.1
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 6.5e-22 107.8 96 52.1
MD16G1135500 Malus domestica HOM05D006708 ORTHO05D008321 6.5e-22 107.8 103 51.5
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 8.5e-22 107.5 107 48.6
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 8.5e-22 107.5 97 53.6
AL3G18120 Arabidopsis lyrata HOM05D006708 ORTHO05D008321 1.1e-21 107.1 104 51.0
EL10Ac3g06239 Beta vulgaris HOM05D006708 ORTHO05D008321 1.9e-21 106.3 102 52.0
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 1.9e-21 106.3 124 44.4
Migut.A01089 Erythranthe guttata HOM05D006708 ORTHO05D008321 1.9e-21 106.3 102 52.9
Sc19g0002530 Simmondsia chinensis HOM05D006708 ORTHO05D008321 1.9e-21 106.3 98 53.1
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 2.5e-21 105.9 95 55.8
Sabra08G0153200 Salix brachista HOM05D006708 ORTHO05D008321 3.2e-21 105.5 97 55.7
Carub.0003s0647 Capsella rubella HOM05D006708 ORTHO05D008321 4.2e-21 105.1 104 49.0
MD13G1140300 Malus domestica HOM05D006708 ORTHO05D008321 1.6e-20 103.2 96 52.1
Eucgr.B03960 Eucalyptus grandis HOM05D006708 ORTHO05D008321 2.7e-20 102.4 96 53.1
AT3G06950 Arabidopsis thaliana HOM05D006708 ORTHO05D008321 7.9e-20 100.9 104 50.0
AUR62002543 Chenopodium quinoa HOM05D006708 ORTHO05D008321 7.9e-20 100.9 94 50.0
unitig_747.g22054 Utricularia gibba HOM05D006708 ORTHO05D008321 3.0e-19 99.0 130 43.1
CARHR081550 Cardamine hirsuta HOM05D006708 ORTHO05D008321 6.7e-19 97.8 104 48.1
Cpa.g.sc146.18 Carica papaya HOM05D006708 ORTHO05D008321 8.8e-19 97.4 100 51.0
ClCG06G004170 Citrullus lanatus HOM05D006708 ORTHO05D008321 8.8e-19 97.4 105 49.5
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 3.3e-18 95.5 96 50.0
CSS0015576 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 3.7e-17 92.0 106 44.3
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 2.4e-16 89.4 87 50.6
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 9.1e-16 87.4 93 47.3
HPP92_001944 Vanilla planifolia HOM05D006708 ORTHO05D008321 3.8e-14 82.0 83 50.6
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 5.0e-14 81.6 92 50.0
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 4.2e-13 78.6 77 49.4
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 7.2e-13 77.8 96 43.8
CSS0031150 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 2.7e-12 75.9 54 66.7
HanXRQChr10g0278271 Helianthus annuus HOM05D006708 ORTHO05D008321 4.8e-09 65.1 135 31.9
Rhsim05G0000200 Rhododendron simsii HOM05D006708 ORTHO05D008321 2.4e-08 62.8 55 52.7


User provided reference genes

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