Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01599 Sequoiadendron giganteum HOM05D001873 ORTHO05D001976 1.3e-60 236.1 113 100.0
SEGI_08304 Sequoiadendron giganteum HOM05D001873 ORTHO05D001976 2.2e-23 112.5 67 80.6
PSO384G0789 Papaver somniferum HOM05D001873 ORTHO05D001976 2.5e-11 72.4 84 48.8
PSO339G6691 Papaver somniferum HOM05D001873 ORTHO05D001976 5.6e-11 71.2 84 48.8
FAN09G0313 Fragaria x ananassa HOM05D001873 ORTHO05D001976 6.2e-10 67.8 79 41.8
CSS0019368 Camellia sinensis var. sinensis HOM05D001873 ORTHO05D001976 1.8e-09 66.2 69 49.3
MD12G1025200 Malus domestica HOM05D001873 ORTHO05D001976 1.8e-09 66.2 71 47.9
Prupe.7G108900 Prunus persica HOM05D001873 ORTHO05D001976 1.8e-09 66.2 71 47.9
CANSAT64G0757 Cannabis sativa HOM05D001873 ORTHO05D001976 2.3e-09 65.9 84 41.7
CDE08G1064 Ceratophyllum demersum HOM05D001873 ORTHO05D001976 3.1e-09 65.5 71 46.5
MD14G1023900 Malus domestica HOM05D001873 ORTHO05D001976 3.1e-09 65.5 70 48.6
CDE06G2814 Ceratophyllum demersum HOM05D001873 ORTHO05D001976 4.0e-09 65.1 63 50.8
ECA238G4484 Erigeron canadensis HOM05D001873 ORTHO05D001976 4.0e-09 65.1 63 49.2
Lj2C138T5 Lonicera japonica HOM05D001873 ORTHO05D001976 5.2e-09 64.7 63 50.8
CDE02G3938 Ceratophyllum demersum HOM05D001873 ORTHO05D001976 8.9e-09 63.9 63 47.6
Manes.09G054400 Manihot esculenta HOM05D001873 ORTHO05D001976 8.9e-09 63.9 48 62.5
Oeu017684.1 Olea europaea HOM05D001873 ORTHO05D001976 1.2e-08 63.5 56 53.6
RcHm_v2.0_Chr3g0473891 Rosa chinensis HOM05D001873 ORTHO05D001976 1.2e-08 63.5 63 49.2
SGA_v2.0_scaffold184G39970 Striga asiatica HOM05D001873 ORTHO05D001976 1.2e-08 63.5 68 48.5
Lsat_1_v5_gn_2_119400 Lactuca sativa HOM05D001873 ORTHO05D001976 1.5e-08 63.2 48 60.4
Manes.08G026200 Manihot esculenta HOM05D001873 ORTHO05D001976 1.5e-08 63.2 48 60.4
SGA_v2.0_scaffold35G14058 Striga asiatica HOM05D001873 ORTHO05D001976 1.5e-08 63.2 48 60.4
Nitab4.5_0000692g0070 Nicotiana tabacum HOM05D001873 ORTHO05D001976 2.0e-08 62.8 62 50.0
CDE08G0652 Ceratophyllum demersum HOM05D001873 ORTHO05D001976 2.6e-08 62.4 63 47.6
CDE08G0675 Ceratophyllum demersum HOM05D003753 ORTHO05D005081 2.6e-08 62.4 48 58.3
HanXRQChr14g0458061 Helianthus annuus HOM05D001873 ORTHO05D001976 2.6e-08 62.4 48 62.5
Nn2g14174 Nelumbo nucifera HOM05D001873 ORTHO05D001976 2.6e-08 62.4 61 50.8
GSVIVG01033857001 Vitis vinifera HOM05D001873 ORTHO05D001976 2.6e-08 62.4 47 61.7
Aqoxy2G01132 Aquilegia oxysepala HOM05D001873 ORTHO05D001976 3.4e-08 62.0 48 60.4
Cc06_g05930 Coffea canephora HOM05D001873 ORTHO05D001976 3.4e-08 62.0 48 60.4
Sabra06G0163500 Salix brachista HOM05D001873 ORTHO05D001976 3.4e-08 62.0 63 47.6
TAR633G2108 Trochodendron aralioides HOM05D001873 ORTHO05D001976 3.4e-08 62.0 63 47.6
Potri.006G212400 Populus trichocarpa HOM05D001873 ORTHO05D001976 4.4e-08 61.6 63 47.6
Potri.016G079200 Populus trichocarpa HOM05D001873 ORTHO05D001976 4.4e-08 61.6 63 47.6
Sc02g0000300 Simmondsia chinensis HOM05D001873 ORTHO05D001976 4.4e-08 61.6 69 47.8
TAR629G1242 Trochodendron aralioides HOM05D001873 ORTHO05D001976 4.4e-08 61.6 48 60.4
Actinidia31267 Actinidia chinensis HOM05D001873 ORTHO05D001976 5.8e-08 61.2 48 58.3
arahy.Tifrunner.gnm1.ann1.AJL8C7 Arachis hypogaea HOM05D001873 ORTHO05D001976 5.8e-08 61.2 56 53.6
arahy.Tifrunner.gnm1.ann1.TJRX0G Arachis hypogaea HOM05D001873 ORTHO05D001976 5.8e-08 61.2 56 53.6
Dinv21198 Davidia involucrata HOM05D001873 ORTHO05D001976 5.8e-08 61.2 47 59.6
FvH4_6g18900 Fragaria vesca HOM05D001873 ORTHO05D001976 5.8e-08 61.2 63 47.6
FAN02G0207 Fragaria x ananassa HOM05D001873 ORTHO05D001976 5.8e-08 61.2 63 47.6
FAN05G0160 Fragaria x ananassa HOM05D001873 ORTHO05D001976 5.8e-08 61.2 63 47.6
FAN14G4575 Fragaria x ananassa HOM05D001873 ORTHO05D001976 5.8e-08 61.2 63 47.6
Gohir.D04G098900 Gossypium hirsutum HOM05D001873 ORTHO05D001976 5.8e-08 61.2 69 43.5
Gorai.009G401300 Gossypium raimondii HOM05D001873 ORTHO05D001976 5.8e-08 61.2 69 43.5
Lalb_Chr20g0111671 Lupinus albus HOM05D001873 ORTHO05D001976 5.8e-08 61.2 48 60.4
Dinv31695 Davidia involucrata HOM05D001873 ORTHO05D001976 7.5e-08 60.8 63 46.0
Migut.L01787 Erythranthe guttata HOM05D001873 ORTHO05D001976 7.5e-08 60.8 48 58.3
Hma1.2p1_0587F.1_g184330 Hydrangea macrophylla HOM05D001873 ORTHO05D001976 7.5e-08 60.8 70 44.3
PSO339G2576 Papaver somniferum HOM05D001873 ORTHO05D001976 7.5e-08 60.8 63 49.2
TWI74G1254 Tripterygium wilfordii HOM05D001873 ORTHO05D001976 7.5e-08 60.8 84 38.1
Ciclev10011562m.g Citrus clementina HOM05D001873 ORTHO05D001976 9.9e-08 60.5 63 46.0
Oeu002373.1 Olea europaea HOM05D001873 ORTHO05D001976 9.9e-08 60.5 71 39.4
PSO135G0173 Papaver somniferum HOM05D001873 ORTHO05D001976 9.9e-08 60.5 62 50.0
PSO384G0842 Papaver somniferum HOM05D001873 ORTHO05D001976 9.9e-08 60.5 62 50.0
MSTRG.10372 Avicennia marina HOM05D001873 ORTHO05D001976 1.3e-07 60.1 48 56.2
QL07p038668 Quercus lobata HOM05D001873 ORTHO05D001976 1.3e-07 60.1 63 47.6
Rhsim03G0074600 Rhododendron simsii HOM05D001873 ORTHO05D001976 1.3e-07 60.1 48 56.2
Solyc09g009890.4 Solanum lycopersicum HOM05D001873 ORTHO05D001976 1.3e-07 60.1 62 48.4
Sopen09g004640 Solanum pennellii HOM05D001873 ORTHO05D001976 1.3e-07 60.1 62 48.4
PGSC0003DMG400008877 Solanum tuberosum HOM05D001873 ORTHO05D001976 1.3e-07 60.1 62 48.4
TPR.G23326 Trifolium pratense HOM05D001873 ORTHO05D001976 1.7e-07 59.7 56 50.0
HPP92_002816 Vanilla planifolia HOM05D001873 ORTHO05D001976 1.7e-07 59.7 62 48.4
PSO384G1112 Papaver somniferum HOM05D001873 ORTHO05D001976 2.2e-07 59.3 48 58.3
Peaxi162Scf00404g00217 Petunia axillaris HOM05D001873 ORTHO05D001976 2.2e-07 59.3 62 46.8
Sed0012361 Sechium edule HOM05D001873 ORTHO05D001976 2.2e-07 59.3 69 43.5
Hund19923 Selenicereus undatus HOM05D001873 ORTHO05D001976 2.2e-07 59.3 48 58.3
Medtr7g104800 Medicago truncatula HOM05D001873 ORTHO05D001976 2.9e-07 58.9 69 43.5
Cc01_g09070 Coffea canephora HOM05D001873 ORTHO05D001976 3.7e-07 58.5 84 36.9
Atru.chr8.1485 Acer truncatum HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 56.2
Ca_09012_v3 Cicer arietinum L. HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 54.2
Glyma.03G196700 Glycine max HOM05D001873 ORTHO05D001976 4.9e-07 58.2 56 48.2
Gohir.A01G205600 Gossypium hirsutum HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 54.2
Gohir.D01G195100 Gossypium hirsutum HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 54.2
Gorai.002G239200 Gossypium raimondii HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 54.2
Pp3c12_1580 Physcomitrium patens HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 56.2
TWI79G0697 Tripterygium wilfordii HOM05D001873 ORTHO05D001976 4.9e-07 58.2 63 42.9
TAR374G1666 Trochodendron aralioides HOM05D001873 ORTHO05D001976 4.9e-07 58.2 48 58.3
HPP92_001542 Vanilla planifolia HOM05D001873 ORTHO05D001976 4.9e-07 58.2 53 50.9
GSVIVG01036119001 Vitis vinifera HOM05D001873 ORTHO05D001976 4.9e-07 58.2 63 44.4
Ah.15g090830 Amaranthus hybridus HOM05D001873 ORTHO05D001976 6.4e-07 57.8 70 40.0
MELO3C014502.2 Cucumis melo HOM05D001873 ORTHO05D001976 6.4e-07 57.8 63 42.9
CsaV3_6G038380 Cucumis sativus L. HOM05D001873 ORTHO05D001976 6.4e-07 57.8 63 42.9
Solyc10g009220.3 Solanum lycopersicum HOM05D001873 ORTHO05D001976 6.4e-07 57.8 48 56.2
Sopen10g005010 Solanum pennellii HOM05D001873 ORTHO05D001976 6.4e-07 57.8 48 56.2
THA.LOC104804892 Tarenaya hassleriana HOM05D001873 ORTHO05D001976 6.4e-07 57.8 55 50.9
TAR636G0288 Trochodendron aralioides HOM05D001873 ORTHO05D001976 6.4e-07 57.8 52 51.9
GSVIVG01027425001 Vitis vinifera HOM05D001873 ORTHO05D001976 6.4e-07 57.8 60 50.0
ATR0776G050 Amborella trichopoda HOM05D001873 ORTHO05D001976 8.3e-07 57.4 70 41.4
BcaC04g24100 Brassica carinata HOM05D001873 ORTHO05D001976 8.3e-07 57.4 48 54.2
C09p01060 Brassica napus HOM05D001873 ORTHO05D001976 8.3e-07 57.4 48 54.2
CARHR162480 Cardamine hirsuta HOM05D001873 ORTHO05D001976 8.3e-07 57.4 47 55.3
CiPaw.10G010600 Carya illinoinensis HOM05D001873 ORTHO05D001976 8.3e-07 57.4 63 46.0
Psat3g032360 Pisum sativum HOM05D001873 ORTHO05D001976 8.3e-07 57.4 56 48.2
Aqoxy5G04327 Aquilegia oxysepala HOM05D001873 ORTHO05D001976 1.1e-06 57.0 75 38.7
Lj2C946T13 Lonicera japonica HOM05D001873 ORTHO05D001976 1.1e-06 57.0 63 44.4
Dinv34254 Davidia involucrata HOM05D001873 ORTHO05D001976 1.4e-06 56.6 63 42.9
Gohir.A04G062100 Gossypium hirsutum HOM05D001873 ORTHO05D001976 1.4e-06 56.6 69 42.0
Hund03993 Selenicereus undatus HOM05D001873 ORTHO05D001976 1.4e-06 56.6 71 40.8
AL6G52630 Arabidopsis lyrata HOM05D001873 ORTHO05D001976 1.9e-06 56.2 63 44.4
Carub.0006s3585 Capsella rubella HOM05D001873 ORTHO05D001976 1.9e-06 56.2 48 54.2
Thhalv10010358m.g Eutrema salsugineum HOM05D001873 ORTHO05D001976 1.9e-06 56.2 47 55.3
Sp6g01290 Schrenkiella parvula HOM05D001873 ORTHO05D001976 1.9e-06 56.2 48 54.2
SMO119G0473 Selaginella moellendorffii HOM05D001873 ORTHO05D001976 1.9e-06 56.2 48 56.2
BcaB01g02311 Brassica carinata HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
A03p31680 Brassica napus HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
A09p00980 Brassica napus HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
BolC9t53039H Brassica oleracea HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
BraA03t12346Z Brassica rapa HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
BraA09t35768Z Brassica rapa HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
CARHR249500 Cardamine hirsuta HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 54.2
Dinv32639 Davidia involucrata HOM05D001873 ORTHO05D001976 2.4e-06 55.8 61 44.3
Eucgr.B03847 Eucalyptus grandis HOM05D001873 ORTHO05D001976 2.4e-06 55.8 71 38.0
Nn1g00414 Nelumbo nucifera HOM05D001873 ORTHO05D001976 2.4e-06 55.8 48 56.2
Nitab4.5_0002053g0020 Nicotiana tabacum HOM05D001873 ORTHO05D001976 2.4e-06 55.8 63 44.4
COL.COLO4_06212 Corchorus olitorius HOM05D001873 ORTHO05D001976 3.2e-06 55.5 48 54.2
COL.COLO4_29717 Corchorus olitorius HOM05D001873 ORTHO05D001976 3.2e-06 55.5 69 40.6
Migut.B01919 Erythranthe guttata HOM05D001873 ORTHO05D001976 3.2e-06 55.5 48 54.2
Thhalv10028602m.g Eutrema salsugineum HOM05D001873 ORTHO05D001976 3.2e-06 55.5 48 54.2
HanXRQChr16g0524561 Helianthus annuus HOM05D001873 ORTHO05D001976 3.2e-06 55.5 48 52.1
Lj1g0005537 Lotus japonicus HOM05D001873 ORTHO05D001976 3.2e-06 55.5 56 48.2
Prupe.6G130600 Prunus persica HOM05D001873 ORTHO05D001976 3.2e-06 55.5 48 54.2
Sabra14G0076800 Salix brachista HOM05D001873 ORTHO05D001976 3.2e-06 55.5 89 39.3
Sed0005634 Sechium edule HOM05D001873 ORTHO05D001976 3.2e-06 55.5 84 35.7
Cc02_g39900 Coffea canephora HOM05D001873 ORTHO05D001976 4.1e-06 55.1 63 42.9
Lj1g0023535 Lotus japonicus HOM05D001873 ORTHO05D001976 4.1e-06 55.1 56 48.2
MD07G1157800 Malus domestica HOM05D001873 ORTHO05D001976 4.1e-06 55.1 54 50.0
Manes.05G017400 Manihot esculenta HOM05D001873 ORTHO05D001976 4.1e-06 55.1 48 52.1
Rhsim01G0179100 Rhododendron simsii HOM05D001873 ORTHO05D001976 4.1e-06 55.1 63 42.9
Thecc.05G090400 Theobroma cacao HOM05D001873 ORTHO05D001976 4.1e-06 55.1 48 52.1
Actinidia28091 Actinidia chinensis HOM05D001873 ORTHO05D001976 5.4e-06 54.7 63 41.3
AagrBONN_evm.TU.Sc2ySwM_368.2825 Anthoceros agrestis HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
AT3G52660 Arabidopsis thaliana HOM05D001873 ORTHO05D001976 5.4e-06 54.7 47 53.2
AT4G00830 Arabidopsis thaliana HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
Carub.0005s1907 Capsella rubella HOM05D001873 ORTHO05D001976 5.4e-06 54.7 47 53.2
Lsat_1_v5_gn_4_31720 Lactuca sativa HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
Phvul.001G190900 Phaseolus vulgaris HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 54.2
Potri.002G178200 Populus trichocarpa HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
Potri.014G104500 Populus trichocarpa HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
RcHm_v2.0_Chr5g0044751 Rosa chinensis HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 50.0
Sabra02G0135400 Salix brachista HOM05D001873 ORTHO05D001976 5.4e-06 54.7 48 52.1
SHI23842 Sapria himalayana HOM05D001873 ORTHO05D001976 5.4e-06 54.7 53 50.9
Sp5g09640 Schrenkiella parvula HOM05D001873 ORTHO05D001976 5.4e-06 54.7 47 53.2
BcaB01g00350 Brassica carinata HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
BcaC07g39632 Brassica carinata HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
A09p45730 Brassica napus HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
C08p27950 Brassica napus HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
BolC8t50407H Brassica oleracea HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
BraA09t40033Z Brassica rapa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 47 55.3
CSS0021983 Camellia sinensis var. sinensis HOM05D001873 ORTHO05D001976 7.1e-06 54.3 63 41.3
FvH4_3g24960 Fragaria vesca HOM05D001873 ORTHO05D001976 7.1e-06 54.3 48 50.0
FvH4_7g17500 Fragaria vesca HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN03G0545 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN06G0890 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN06G3782 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN10G4233 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN10G4319 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 54 48.1
FAN11G3771 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 48 50.0
FAN16G2633 Fragaria x ananassa HOM05D001873 ORTHO05D001976 7.1e-06 54.3 48 50.0
Thecc.09G282600 Theobroma cacao HOM05D001873 ORTHO05D001976 7.1e-06 54.3 48 52.1
TPR.G4750 Trifolium pratense HOM05D001873 ORTHO05D001976 7.1e-06 54.3 48 52.1
Duzib150G1484 Durio zibethinus HOM05D001873 ORTHO05D001976 9.2e-06 53.9 48 50.0
Glyma.03G260500 Glycine max HOM05D001873 ORTHO05D001976 9.2e-06 53.9 48 52.1
Glyma.19G259200 Glycine max HOM05D001873 ORTHO05D001976 9.2e-06 53.9 48 52.1
MD11G1164700 Malus domestica HOM05D001873 ORTHO05D001976 9.2e-06 53.9 68 42.6
Pp3c17_1210 Physcomitrium patens HOM05D001873 ORTHO05D001976 9.2e-06 53.9 48 52.1
PGR031G3901 Punica granatum HOM05D001873 ORTHO05D001976 9.2e-06 53.9 63 44.4


User provided reference genes

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