Gene: AT3G52660
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G52660
- Transcript Identifier AT3G52660.1
- Gene Type Coding gene
- Location Chr3 : 19522598-19524735 : positive
Gene Family Information
- ID HOM05D001873
- #Genes/#Species 351/96
- Phylogenetic origin
- ID ORTHO05D001976
- #Genes/#Species 330/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G52660.1
- uniprot Q9LXJ8
Descriptions
- Description RNA-binding (RRM/RBD/RNP motifs) family protein
- Computational description RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G00830.2); Has 39411 Blast hits to 22154 proteins in 1003 species: Archae - 84; Bacteria - 1991; Metazoa - 19033; Fungi - 3968; Plants - 4828; Viruses - 731; Other Eukaryotes - 8776 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA, HDA | Gene Ontology | mRNA binding | 1 2 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005634 | IBA | Gene Ontology | nucleus | 3 |
| GO:0005829 | IDA | GOA Database | cytosol |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |