Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_01066 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 1.9e-170 602.4 306 100.0
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 2.0e-39 167.2 194 48.5
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 5.9e-39 165.6 194 49.5
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 2.2e-38 163.7 194 49.0
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 2.9e-38 163.3 124 62.1
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 1.1e-37 161.4 124 62.1
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 2.5e-37 160.2 124 62.1
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 2.5e-37 160.2 124 61.3
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 3.2e-37 159.8 124 62.1
TAR375G0769 Trochodendron aralioides HOM05D004422 ORTHO05D007331 4.2e-37 159.5 171 49.7
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 5.5e-37 159.1 138 58.0
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 5.5e-37 159.1 130 59.2
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 7.2e-37 158.7 193 47.2
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 7.2e-37 158.7 130 60.0
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 9.4e-37 158.3 138 57.2
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 1.2e-36 157.9 124 61.3
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 1.6e-36 157.5 138 57.2
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 2.1e-36 157.1 143 55.2
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 2.7e-36 156.8 194 45.9
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 3.6e-36 156.4 130 57.7
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 4.7e-36 156.0 124 62.1
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 4.7e-36 156.0 130 57.7
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 6.1e-36 155.6 130 57.7
COL.COLO4_07155 Corchorus olitorius HOM05D004422 ORTHO05D007331 8.0e-36 155.2 138 56.5
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 8.0e-36 155.2 124 61.3
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 1.0e-35 154.8 124 61.3
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 1.0e-35 154.8 138 55.1
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 1.4e-35 154.5 169 50.3
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 1.8e-35 154.1 130 56.9
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 2.3e-35 153.7 138 54.3
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 2.3e-35 153.7 138 55.1
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 2.3e-35 153.7 169 49.7
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 3.0e-35 153.3 130 56.9
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 3.0e-35 153.3 130 56.9
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 3.9e-35 152.9 178 47.8
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 3.9e-35 152.9 170 48.8
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 3.9e-35 152.9 130 56.9
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 5.2e-35 152.5 138 54.3
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 5.2e-35 152.5 124 56.5
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 5.2e-35 152.5 169 49.1
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 6.7e-35 152.1 194 45.4
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 6.7e-35 152.1 194 45.4
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 6.7e-35 152.1 124 59.7
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.7e-35 152.1 124 58.9
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 6.7e-35 152.1 169 47.9
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 6.7e-35 152.1 169 47.9
CARHR156840 Cardamine hirsuta HOM05D004422 ORTHO05D007331 8.8e-35 151.8 193 44.0
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 8.8e-35 151.8 290 37.6
FvH4_7g10270 Fragaria vesca HOM05D004422 ORTHO05D007331 8.8e-35 151.8 124 58.9
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 8.8e-35 151.8 169 50.3
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 1.1e-34 151.4 194 45.4
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 1.1e-34 151.4 194 45.4
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 1.1e-34 151.4 126 56.3
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 1.5e-34 151.0 124 58.1
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 2.0e-34 150.6 194 44.8
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 2.0e-34 150.6 130 56.9
VMungo0331G0292 Vigna mungo HOM05D000002 ORTHO05D000001 2.0e-34 150.6 178 47.8
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 2.6e-34 150.2 130 55.4
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 2.6e-34 150.2 169 48.5
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 2.6e-34 150.2 124 58.1
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 5.7e-34 149.1 130 55.4
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 7.4e-34 148.7 130 54.6
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 7.4e-34 148.7 130 57.7
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 9.7e-34 148.3 138 53.6
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 9.7e-34 148.3 194 44.3
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 9.7e-34 148.3 138 50.7
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 1.3e-33 147.9 124 58.9
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 1.3e-33 147.9 156 48.7
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 1.3e-33 147.9 130 53.1
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 1.3e-33 147.9 193 44.6
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 1.3e-33 147.9 191 45.0
CAN.G1473.2 Capsicum annuum HOM05D004422 ORTHO05D007331 1.7e-33 147.5 130 56.2
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 1.7e-33 147.5 156 49.4
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 2.2e-33 147.1 169 47.9
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 2.2e-33 147.1 181 48.1
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 3.7e-33 146.4 191 44.5
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 6.3e-33 145.6 194 42.8
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 6.3e-33 145.6 169 49.1
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 6.3e-33 145.6 144 50.0
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 8.2e-33 145.2 130 55.4
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 8.2e-33 145.2 130 54.6
Carub.0005s1422 Capsella rubella HOM05D004422 ORTHO05D007331 1.4e-32 144.4 194 42.3
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.8e-32 144.1 194 42.8
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 5.3e-32 142.5 140 53.6
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 5.3e-32 142.5 124 53.2
CDE02G3124 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 1.2e-31 141.4 138 50.7
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 1.2e-31 141.4 130 52.3
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 2.6e-31 140.2 124 57.3
QL09p024682 Quercus lobata HOM05D004422 ORTHO05D007331 3.5e-31 139.8 231 39.4
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 4.5e-31 139.4 130 51.5
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 7.7e-31 138.7 124 55.6
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 1.3e-30 137.9 124 52.4
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 2.9e-30 136.7 120 53.3
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 7.2e-29 132.1 151 47.0
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 6.1e-28 129.0 78 83.3
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 7.5e-26 122.1 132 43.9
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 7.7e-23 112.1 150 43.3
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 2.2e-22 110.5 95 55.8
SEGI_25655 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 2.5e-21 107.1 99 56.6
Aqoxy1G01621 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 4.2e-21 106.3 89 57.3
SEGI_39880 Sequoiadendron giganteum HOM05D009239 ORTHO05D008152 4.2e-21 106.3 105 49.5
SEGI_25227 Sequoiadendron giganteum HOM05D009239 ORTHO05D015310 6.1e-20 102.4 108 53.7
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 1.5e-18 97.8 143 39.2
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-18 97.8 176 36.9
SEGI_40002 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 5.7e-18 95.9 80 55.0
SEGI_37216 Sequoiadendron giganteum HOM05D015854 ORTHO05D005133 2.2e-17 94.0 109 45.0
SEGI_31887 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 4.9e-17 92.8 99 51.5
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 6.3e-17 92.4 76 63.2
SEGI_02211 Sequoiadendron giganteum HOM05D009239 ORTHO05D026139 4.1e-16 89.7 80 58.8
COL.COLO4_33296 Corchorus olitorius HOM05D004422 ORTHO05D007331 5.4e-16 89.4 79 51.9
SEGI_32350 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 1.6e-15 87.8 87 51.7
SEGI_34481 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 1.6e-15 87.8 97 47.4
SEGI_01165 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 4.5e-15 86.3 125 42.4
SEGI_18051 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 1.0e-14 85.1 85 51.8
SEGI_05058 Sequoiadendron giganteum HOM05D001582 ORTHO05D005133 1.3e-14 84.7 116 40.5
SEGI_38937 Sequoiadendron giganteum HOM05D001582 ORTHO05D005133 1.3e-14 84.7 116 40.5
SEGI_19161 Sequoiadendron giganteum HOM05D009239 ORTHO05D014795 6.6e-14 82.4 80 55.0
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 3.3e-13 80.1 116 38.8
SEGI_12076 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 4.2e-13 79.7 139 37.4
QL04p030045 Quercus lobata HOM05D004422 ORTHO05D007331 7.2e-13 79.0 66 60.6
SEGI_17545 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 1.2e-12 78.2 80 50.0
SEGI_34916 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 1.6e-12 77.8 125 37.6
SEGI_35863 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 2.8e-12 77.0 150 36.0
SEGI_23597 Sequoiadendron giganteum HOM05D009239 ORTHO05D005806 8.0e-12 75.5 125 37.6
SEGI_35495 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 1.0e-11 75.1 94 45.7
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 1.8e-11 74.3 118 33.1
Cpa.g.sc22.56 Carica papaya HOM05D004422 ORTHO05D007331 2.0e-10 70.9 76 44.7
SEGI_40446 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 3.2e-08 63.5 41 70.7
SEGI_09642 Sequoiadendron giganteum HOM05D015854 ORTHO05D005133 6.6e-06 55.8 108 34.3
SEGI_35811 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 8.6e-06 55.5 82 39.0


User provided reference genes

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