Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.4e-153 545.8 354 100.0
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 8.6e-50 201.8 212 51.4
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 9.0e-15 85.5 163 33.7
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.3e-13 81.6 194 30.4
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.8e-13 80.1 179 30.2
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 3.5e-11 73.6 114 29.8
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 7.8e-11 72.4 107 35.5
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.7e-10 71.2 113 31.9
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.9e-10 70.1 106 32.1
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 3.9e-10 70.1 115 30.4
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 5.1e-10 69.7 115 32.2
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 5.1e-10 69.7 106 33.0
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 6.6e-10 69.3 115 31.3
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 8.7e-10 68.9 115 31.3
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.1e-09 68.6 106 33.0
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 1.1e-09 68.6 106 33.0
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.5e-09 68.2 113 31.0
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 1.5e-09 68.2 106 33.0
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 1.5e-09 68.2 106 31.1
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 1.5e-09 68.2 106 31.1
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.5e-09 68.2 111 31.5
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 1.5e-09 68.2 106 32.1
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 1.5e-09 68.2 102 32.4
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.9e-09 67.8 115 31.3
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 1.9e-09 67.8 115 29.6
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 2.5e-09 67.4 115 27.0
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 2.5e-09 67.4 115 29.6
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.5e-09 67.4 115 31.3
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 3.3e-09 67.0 115 28.7
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 4.3e-09 66.6 106 32.1
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 4.3e-09 66.6 115 27.8
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 4.3e-09 66.6 105 31.4
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 5.6e-09 66.2 115 28.7
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 5.6e-09 66.2 115 32.2
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.6e-09 66.2 106 33.0
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 5.6e-09 66.2 115 30.4
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 5.6e-09 66.2 104 31.7
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 7.3e-09 65.9 156 25.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 7.3e-09 65.9 117 29.1
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 7.3e-09 65.9 111 30.6
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 9.6e-09 65.5 115 28.7
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 9.6e-09 65.5 115 29.6
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 9.6e-09 65.5 112 29.5
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 9.6e-09 65.5 115 27.0
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.3e-08 65.1 155 25.8
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.3e-08 65.1 115 28.7
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 1.3e-08 65.1 144 25.0
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.3e-08 65.1 104 32.7
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 1.6e-08 64.7 115 27.8
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.6e-08 64.7 111 30.6
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 1.6e-08 64.7 115 27.8
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 2.8e-08 63.9 102 33.3
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 2.8e-08 63.9 141 27.0
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 2.8e-08 63.9 106 30.2
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.6e-08 63.5 114 28.1
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.6e-08 63.5 114 28.1
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 3.6e-08 63.5 115 29.6
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 3.6e-08 63.5 115 27.8
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 4.8e-08 63.2 107 31.8
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 4.8e-08 63.2 114 28.1
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 4.8e-08 63.2 106 29.2
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 4.8e-08 63.2 112 30.4
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 6.2e-08 62.8 104 31.7
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 6.2e-08 62.8 107 28.0
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 6.2e-08 62.8 107 28.0
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 6.2e-08 62.8 106 30.2
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.2e-08 62.8 114 28.1
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.2e-08 62.8 114 28.1
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 6.2e-08 62.8 103 31.1
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 6.2e-08 62.8 112 31.2
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 6.2e-08 62.8 115 27.8
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 8.1e-08 62.4 106 32.1
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 1.1e-07 62.0 104 27.9
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 1.4e-07 61.6 114 27.2
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 1.4e-07 61.6 107 27.1
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 3.1e-07 60.5 105 28.6
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 3.1e-07 60.5 153 23.5
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 3.1e-07 60.5 116 29.3
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 4.0e-07 60.1 138 27.5
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 4.0e-07 60.1 106 27.4
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 4.0e-07 60.1 108 28.7
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 4.0e-07 60.1 120 27.5
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 5.3e-07 59.7 115 27.0
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 6.9e-07 59.3 115 26.1
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 9.0e-07 58.9 115 26.1
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 9.0e-07 58.9 141 27.0
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 1.2e-06 58.5 140 24.3
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 2.0e-06 57.8 115 26.1
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 2.0e-06 57.8 142 24.6
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 3.4e-06 57.0 103 29.1
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 4.5e-06 56.6 115 26.1
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 5.8e-06 56.2 113 30.1
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 5.8e-06 56.2 103 29.1
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.8e-06 56.2 96 30.2
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 7.6e-06 55.8 107 29.9


User provided reference genes

Program Settings