Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0195100 Rhododendron simsii HOM05D004190 ORTHO05D004692 3.8e-185 651.4 328 100.0
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 3.3e-56 223.0 329 45.0
CSS0021452 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 5.2e-33 146.0 103 68.9
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 7.0e-30 135.6 306 35.0
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 4.5e-29 132.9 319 37.3
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 7.7e-29 132.1 307 34.2
Haze_24100 Corylus avellana HOM05D004190 ORTHO05D004692 1.1e-27 128.3 294 36.4
QL01p031797 Quercus lobata HOM05D004190 ORTHO05D004692 2.5e-27 127.1 346 34.4
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 9.5e-27 125.2 309 34.3
ClCG03G001470 Citrullus lanatus HOM05D004190 ORTHO05D004692 1.2e-26 124.8 319 33.5
Sabra09G0021900 Salix brachista HOM05D004190 ORTHO05D004692 1.6e-26 124.4 192 40.6
Sed0024869 Sechium edule HOM05D004190 ORTHO05D004692 4.7e-26 122.9 213 35.7
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 6.1e-26 122.5 289 34.9
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 1.8e-25 120.9 291 33.3
Dinv08914 Davidia involucrata HOM05D004190 ORTHO05D004692 4.0e-25 119.8 107 54.2
Hma1.2p1_0220F.1_g093040 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 5.2e-25 119.4 110 50.0
Hma1.2p1_1227F.1_g268580 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 5.2e-25 119.4 110 50.0
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 5.2e-25 119.4 291 33.0
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 1.2e-24 118.2 291 33.0
Peaxi162Scf00224g00513 Petunia axillaris HOM05D004190 ORTHO05D004692 1.2e-24 118.2 292 32.5
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 3.4e-24 116.7 293 31.7
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 7.5e-24 115.5 237 33.3
RcHm_v2.0_Chr5g0064931 Rosa chinensis HOM05D004190 ORTHO05D004692 1.7e-23 114.4 234 33.3
FAN11G2049 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.2e-23 114.0 211 37.4
CDE02G2475 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 2.8e-23 113.6 193 36.8
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 2.8e-23 113.6 291 33.0
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 4.9e-23 112.8 291 33.0
FvH4_3g36180 Fragaria vesca HOM05D004190 ORTHO05D004692 8.3e-23 112.1 209 35.4
TWI31G0561 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 1.1e-22 111.7 287 31.7
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 1.8e-22 110.9 297 29.6
FAN21G2646 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.4e-22 110.5 211 36.5
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 2.4e-22 110.5 291 32.6
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 4.1e-22 109.8 316 31.0
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 5.4e-22 109.4 203 35.0
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 5.4e-22 109.4 228 36.0
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 5.4e-22 109.4 298 32.9
Aa31sc23G430 Aethionema arabicum HOM05D004190 ORTHO05D004692 9.2e-22 108.6 294 32.0
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 9.2e-22 108.6 287 32.4
MD03G1092700 Malus domestica HOM05D004190 ORTHO05D004692 9.2e-22 108.6 291 32.3
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 1.2e-21 108.2 310 32.3
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 1.2e-21 108.2 310 31.9
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.2e-21 108.2 309 31.4
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 2.0e-21 107.5 293 30.7
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 2.0e-21 107.5 293 30.7
DCAR_002216 Daucus carota HOM05D002742 ORTHO05D002959 3.5e-21 106.7 228 33.8
BcaC04g19780 Brassica carinata HOM05D004190 ORTHO05D004692 4.5e-21 106.3 204 34.8
C09p51780 Brassica napus HOM05D000173 ORTHO05D004692 4.5e-21 106.3 204 34.8
BolC9t58040H Brassica oleracea HOM05D000173 ORTHO05D004692 4.5e-21 106.3 204 34.8
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 4.5e-21 106.3 291 32.3
Dinv22804 Davidia involucrata HOM05D004190 ORTHO05D004692 7.8e-21 105.5 297 31.0
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 7.8e-21 105.5 234 34.6
CiPaw.13G093900 Carya illinoinensis HOM05D004190 ORTHO05D004692 1.0e-20 105.1 197 35.5
BraA02t05794Z Brassica rapa HOM05D004190 ORTHO05D004692 1.3e-20 104.8 298 29.5
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 1.3e-20 104.8 190 33.7
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 1.7e-20 104.4 297 29.3
CANSAT54G1895 Cannabis sativa HOM05D004190 ORTHO05D004692 1.7e-20 104.4 312 30.4
Eucgr.J02050 Eucalyptus grandis HOM05D004190 ORTHO05D004692 1.7e-20 104.4 317 31.2
FAN25G3130 Fragaria x ananassa HOM05D004190 ORTHO05D004692 1.7e-20 104.4 258 33.7
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 2.3e-20 104.0 189 34.4
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 2.3e-20 104.0 248 32.7
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 2.3e-20 104.0 292 31.5
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 2.9e-20 103.6 302 30.5
Oeu048854.1 Olea europaea HOM05D004190 ORTHO05D004692 5.0e-20 102.8 192 34.4
BcaB01g04590 Brassica carinata HOM05D004190 ORTHO05D004692 8.6e-20 102.1 194 34.0
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 8.6e-20 102.1 199 33.2
GSVIVG01024954001 Vitis vinifera HOM05D004190 ORTHO05D004692 1.1e-19 101.7 189 33.9
FAN16G2398 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.5e-19 100.5 255 32.2
THA.LOC104810778 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 2.5e-19 100.5 303 31.4
C03p13790 Brassica napus HOM05D004190 ORTHO05D004692 3.3e-19 100.1 196 33.2
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 3.3e-19 100.1 256 32.8
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 5.6e-19 99.4 199 31.2
BolC3t13827H Brassica oleracea HOM05D004190 ORTHO05D004692 9.5e-19 98.6 195 32.8
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 3.6e-18 96.7 302 29.8
AL8G35820 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 8.0e-18 95.5 305 29.5
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 8.0e-18 95.5 304 29.3
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.0e-17 95.1 256 32.0
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 2.3e-17 94.0 296 30.1
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 3.0e-17 93.6 189 33.3
Cc01_g08740 Coffea canephora HOM05D004190 ORTHO05D004692 3.0e-17 93.6 264 28.8
Haze_12048 Corylus avellana HOM05D004190 ORTHO05D004692 3.0e-17 93.6 355 29.6
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 3.0e-17 93.6 236 32.6
BcaB08g36263 Brassica carinata HOM05D004190 ORTHO05D004692 5.2e-17 92.8 206 33.5
HanXRQChr03g0089211 Helianthus annuus HOM05D004190 ORTHO05D004692 8.9e-17 92.0 310 28.7
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 1.5e-16 91.3 292 28.8
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 1.5e-16 91.3 189 30.7
AT3G46580 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 2.0e-16 90.9 203 31.5
Nn2g13344 Nelumbo nucifera HOM05D004190 ORTHO05D004692 3.4e-16 90.1 278 29.1
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 7.5e-16 89.0 204 32.8
AL5G25450 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 9.8e-16 88.6 201 31.8
AT5G59380 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 9.8e-16 88.6 304 28.3
CAN.G1733.1 Capsicum annuum HOM05D004190 ORTHO05D004692 9.8e-16 88.6 292 29.8
HanXRQChr13g0419771 Helianthus annuus HOM05D004190 ORTHO05D004692 9.8e-16 88.6 246 30.9
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 3.7e-15 86.7 192 33.3
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 3.7e-15 86.7 208 31.7
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 4.9e-15 86.3 309 28.5
Carub.0005s1285 Capsella rubella HOM05D004190 ORTHO05D004692 6.4e-15 85.9 222 29.7
Oeu002348.1 Olea europaea HOM05D004190 ORTHO05D004692 8.3e-15 85.5 110 43.6
PGSC0003DMG400024773 Solanum tuberosum HOM05D004190 ORTHO05D004692 8.3e-15 85.5 196 29.6
Ah.08g219540 Amaranthus hybridus HOM05D004190 ORTHO05D004692 2.4e-14 84.0 295 28.8
Actinidia24234 Actinidia chinensis HOM05D004190 ORTHO05D004692 3.2e-14 83.6 169 43.2
CAN.G745.27 Capsicum annuum HOM05D004190 ORTHO05D004692 5.4e-14 82.8 105 42.9
Hund04953 Selenicereus undatus HOM05D004190 ORTHO05D004692 5.4e-14 82.8 301 27.6
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 1.2e-13 81.6 106 42.5
MELO3C020629.2 Cucumis melo HOM05D004190 ORTHO05D004692 1.2e-13 81.6 330 28.2
AUR62001782 Chenopodium quinoa HOM05D004190 ORTHO05D004692 1.6e-13 81.3 299 28.4
CAN.G745.26 Capsicum annuum HOM05D004190 ORTHO05D004692 2.0e-13 80.9 290 29.0
Sp5g15120 Schrenkiella parvula HOM05D004190 ORTHO05D004692 2.7e-13 80.5 225 30.2
BcaC09g49754 Brassica carinata HOM05D004190 ORTHO05D004692 3.5e-13 80.1 121 38.0
C01p33300 Brassica napus HOM05D004190 ORTHO05D004692 3.5e-13 80.1 121 38.0
BolC1t03263H Brassica oleracea HOM05D004190 ORTHO05D004692 3.5e-13 80.1 121 38.0
BraA01t02543Z Brassica rapa HOM05D004190 ORTHO05D004692 3.5e-13 80.1 121 38.0
MBI05_g22031_MAGBIO Magnolia biondii HOM05D004190 ORTHO05D004692 3.5e-13 80.1 266 27.8
CAN.G1733.5 Capsicum annuum HOM05D004190 ORTHO05D004692 4.6e-13 79.7 194 30.4
Lsat_1_v5_gn_3_111560 Lactuca sativa HOM05D004190 ORTHO05D004692 4.6e-13 79.7 272 28.7
BcaB05g23553 Brassica carinata HOM05D004190 ORTHO05D004692 3.0e-12 77.0 119 37.0
CARHR155230 Cardamine hirsuta HOM05D004190 ORTHO05D004692 3.9e-12 76.6 118 37.3
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 5.0e-12 76.3 229 28.8
Ah.15g097420 Amaranthus hybridus HOM05D004190 ORTHO05D004692 5.0e-12 76.3 214 29.9
TWI75G0988 Tripterygium wilfordii HOM05D006496 ORTHO05D008390 5.0e-12 76.3 97 38.1
Aqoxy4G02933 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 6.6e-12 75.9 211 27.0
PGSC0003DMG400044882 Solanum tuberosum HOM05D004190 ORTHO05D004692 6.6e-12 75.9 60 51.7
CAN.G745.25 Capsicum annuum HOM05D004190 ORTHO05D004692 3.3e-11 73.6 103 41.7
CAN.G745.23 Capsicum annuum HOM05D004190 ORTHO05D004692 7.3e-11 72.4 107 40.2
AUR62009570 Chenopodium quinoa HOM05D004190 ORTHO05D004692 7.3e-11 72.4 110 38.2
Hund04996 Selenicereus undatus HOM05D006496 ORTHO05D008390 2.8e-10 70.5 105 37.1
MSTRG.17696 Avicennia marina HOM05D004190 ORTHO05D004692 4.7e-10 69.7 287 27.9
Rhsim13G0086700 Rhododendron simsii HOM05D006496 ORTHO05D008390 8.0e-10 68.9 120 33.3
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 8.0e-10 68.9 101 36.6
PGSC0003DMG400026343 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.4e-09 68.2 64 43.8
Migut.N02470 Erythranthe guttata HOM05D004190 ORTHO05D004692 2.3e-09 67.4 268 28.0
GSVIVG01025031001 Vitis vinifera HOM05D006496 ORTHO05D008390 4.0e-09 66.6 100 37.0
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 5.2e-09 66.2 156 28.8
CSS0027943 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 6.8e-09 65.9 173 37.6
Duzib093G1405 Durio zibethinus HOM05D006496 ORTHO05D004692 6.8e-09 65.9 77 37.7
CSS0005064 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.2e-08 65.1 107 33.6
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 1.5e-08 64.7 106 34.0
DCAR_018892 Daucus carota HOM05D006496 ORTHO05D008390 3.4e-08 63.5 118 31.4
Lj1P258T42 Lonicera japonica HOM05D004190 ORTHO05D004692 5.8e-08 62.8 129 34.9
SHI05942 Sapria himalayana HOM05D004190 ORTHO05D004692 7.5e-08 62.4 290 26.6
SEGI_09707 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 1.3e-07 61.6 233 26.6
PGSC0003DMG400006228 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.7e-07 61.2 142 31.7
CDE08G1317 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 2.9e-07 60.5 154 31.2
Dinv06143 Davidia involucrata HOM05D021242 ORTHO05D022491 2.9e-07 60.5 90 41.1
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 2.9e-07 60.5 134 30.6
FAN11G2800 Fragaria x ananassa HOM05D006496 ORTHO05D008390 3.7e-07 60.1 122 32.8
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 3.7e-07 60.1 113 31.0
Prupe.6G084300 Prunus persica HOM05D006496 ORTHO05D008390 4.9e-07 59.7 138 29.7
SalBow3G1961 Salvia bowleyana HOM05D006496 ORTHO05D008390 4.9e-07 59.7 116 31.9
Lj2A1055T49 Lonicera japonica HOM05D006496 ORTHO05D008390 6.4e-07 59.3 58 43.1
AUR62001835 Chenopodium quinoa HOM05D006496 ORTHO05D008390 8.3e-07 58.9 113 31.0
SalBow3G0001 Salvia bowleyana HOM05D004190 ORTHO05D004692 8.3e-07 58.9 276 26.4
AUR62009623 Chenopodium quinoa HOM05D006496 ORTHO05D008390 1.1e-06 58.5 113 31.9
Aqoxy7G03749 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 1.4e-06 58.2 45 48.9
Dinv35597 Davidia involucrata HOM05D022761 ORTHO05D022494 1.9e-06 57.8 79 32.9
Ah.08g218920 Amaranthus hybridus HOM05D006496 ORTHO05D008390 3.2e-06 57.0 107 30.8
ATR0559G266 Amborella trichopoda HOM05D004190 ORTHO05D004692 3.2e-06 57.0 262 26.0
Rhsim09G0016600 Rhododendron simsii HOM05D000349 ORTHO05D010734 3.2e-06 57.0 34 85.3
Cfa011508 Carpinus fangiana HOM05D004190 ORTHO05D004692 7.0e-06 55.8 223 28.3
CSS0000664 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 9.2e-06 55.5 118 30.5


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