Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim12G0201300 Rhododendron simsii HOM05D002908 ORTHO05D009379 1.2e-107 393.3 204 100.0
vmacro16974 Vaccinium macrocarpon HOM05D002908 ORTHO05D009379 7.4e-46 188.0 106 86.8
CSS0003033 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D009379 4.5e-35 152.1 106 71.7
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 2.7e-32 142.9 106 66.0
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 2.6e-30 136.3 105 63.8
Cc04_g02900 Coffea canephora HOM05D002908 ORTHO05D009379 2.2e-29 133.3 121 54.5
GSVIVG01017048001 Vitis vinifera HOM05D002908 ORTHO05D009379 1.4e-28 130.6 106 63.2
TAR626G0970 Trochodendron aralioides HOM05D002908 ORTHO05D009379 9.1e-28 127.9 107 55.1
QL05p021357 Quercus lobata HOM05D002908 ORTHO05D009379 3.4e-27 125.9 122 55.7
Oeu023760.1 Olea europaea HOM05D002908 ORTHO05D009379 5.9e-27 125.2 122 51.6
Haze_20099 Corylus avellana HOM05D002908 ORTHO05D009379 1.7e-26 123.6 122 54.9
Lj9C509T18 Lonicera japonica HOM05D002908 ORTHO05D009379 3.8e-26 122.5 87 70.1
Sopen00g013380 Solanum pennellii HOM05D002908 ORTHO05D009379 3.8e-26 122.5 122 50.8
Sopen03g039390 Solanum pennellii HOM05D002908 ORTHO05D009379 3.8e-26 122.5 122 50.8
CiPaw.01G234500 Carya illinoinensis HOM05D002908 ORTHO05D009379 6.5e-26 121.7 125 51.2
PGSC0003DMG400002549 Solanum tuberosum HOM05D002908 ORTHO05D009379 6.5e-26 121.7 188 39.4
Hma1.2p1_0280F.1_g112770 Hydrangea macrophylla HOM05D002908 ORTHO05D009379 1.4e-25 120.6 118 55.9
Nn3g18126 Nelumbo nucifera HOM05D002908 ORTHO05D009379 1.4e-25 120.6 106 53.8
Cfa020089 Carpinus fangiana HOM05D002908 ORTHO05D009379 2.5e-25 119.8 123 54.5
ClCG09G001870 Citrullus lanatus HOM05D002908 ORTHO05D009379 4.2e-25 119.0 124 50.8
Solyc03g120510.1 Solanum lycopersicum HOM05D002908 ORTHO05D009379 4.2e-25 119.0 188 38.8
Hma1.2p1_0036F.1_g023360 Hydrangea macrophylla HOM05D002908 ORTHO05D009379 7.2e-25 118.2 118 55.1
CAN.G438.37 Capsicum annuum HOM05D002908 ORTHO05D009379 1.2e-24 117.5 102 52.9
FvH4_6g31920 Fragaria vesca HOM05D002908 ORTHO05D009379 2.1e-24 116.7 146 43.8
FAN14G2558 Fragaria x ananassa HOM05D002908 ORTHO05D009379 2.1e-24 116.7 146 43.8
Nitab4.5_0001315g0040 Nicotiana tabacum HOM05D002908 ORTHO05D009379 2.1e-24 116.7 102 54.9
TAR624G0662 Trochodendron aralioides HOM05D002908 ORTHO05D009379 2.1e-24 116.7 106 55.7
Lsat_1_v5_gn_1_35381 Lactuca sativa HOM05D002908 ORTHO05D009379 3.6e-24 115.9 105 52.4
FAN09G2948 Fragaria x ananassa HOM05D002908 ORTHO05D009379 4.7e-24 115.5 191 38.7
RcHm_v2.0_Chr2g0139281 Rosa chinensis HOM05D002908 ORTHO05D009379 6.1e-24 115.2 145 44.8
MELO3C024259.2 Cucumis melo HOM05D002908 ORTHO05D009379 7.9e-24 114.8 127 49.6
CsaV3_7G033470 Cucumis sativus L. HOM05D002908 ORTHO05D009379 7.9e-24 114.8 127 51.2
FAN05G5042 Fragaria x ananassa HOM05D002908 ORTHO05D009379 1.0e-23 114.4 146 42.5
Aqoxy7G01536 Aquilegia oxysepala HOM05D002908 ORTHO05D009379 1.8e-23 113.6 106 50.9
MD17G1189400 Malus domestica HOM05D002908 ORTHO05D009379 1.8e-23 113.6 124 49.2
Sed0010660 Sechium edule HOM05D002908 ORTHO05D009379 1.8e-23 113.6 123 48.8
Nitab4.5_0012010g0010 Nicotiana tabacum HOM05D002908 ORTHO05D009379 3.0e-23 112.8 102 54.9
EL10Ac5g10639 Beta vulgaris HOM05D002908 ORTHO05D009379 3.9e-23 112.5 125 57.6
FAN02G4501 Fragaria x ananassa HOM05D002908 ORTHO05D009379 3.9e-23 112.5 145 43.4
PSO210G2107 Papaver somniferum HOM05D002908 ORTHO05D009379 6.7e-23 111.7 105 53.3
Prupe.3G064300 Prunus persica HOM05D002908 ORTHO05D009379 6.7e-23 111.7 190 36.8
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 1.5e-22 110.5 124 47.6
PSO210G1505 Papaver somniferum HOM05D002908 ORTHO05D009379 1.5e-22 110.5 105 52.4
Ca_25052_v3 Cicer arietinum L. HOM05D002908 ORTHO05D009379 4.4e-22 109.0 120 47.5
MSTRG.4743 Avicennia marina HOM05D002908 ORTHO05D009379 9.7e-22 107.8 119 51.3
HanXRQChr04g0096241 Helianthus annuus HOM05D002908 ORTHO05D009379 1.3e-21 107.5 105 48.6
VMungo0331G1893 Vigna mungo HOM05D002908 ORTHO05D009379 1.3e-21 107.5 120 47.5
Peaxi162Scf00015g00014 Petunia axillaris HOM05D002908 ORTHO05D009379 1.7e-21 107.1 103 48.5
Sc12g0009520 Simmondsia chinensis HOM05D002908 ORTHO05D009379 1.7e-21 107.1 108 57.4
Migut.D01010 Erythranthe guttata HOM05D002908 ORTHO05D009379 2.2e-21 106.7 119 49.6
Phvul.010G147300 Phaseolus vulgaris HOM05D002908 ORTHO05D009379 3.7e-21 105.9 120 46.7
AUR62016512 Chenopodium quinoa HOM05D002908 ORTHO05D009379 1.8e-20 103.6 126 51.6
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 2.4e-20 103.2 133 42.1
SalBow7G3178 Salvia bowleyana HOM05D002908 ORTHO05D009379 3.1e-20 102.8 144 41.0
AUR62011686 Chenopodium quinoa HOM05D002908 ORTHO05D009379 5.3e-20 102.1 200 40.0
CANSAT56G0911 Cannabis sativa HOM05D002908 ORTHO05D009379 7.0e-20 101.7 120 50.8
Psat4g199360 Pisum sativum HOM05D002908 ORTHO05D009379 7.0e-20 101.7 121 42.1
Eucgr.J02952 Eucalyptus grandis HOM05D002908 ORTHO05D009379 9.1e-20 101.3 127 45.7
PGR102G2077 Punica granatum HOM05D002908 ORTHO05D009379 4.5e-19 99.0 192 37.5
Manes.04G131200 Manihot esculenta HOM05D002908 ORTHO05D009379 5.9e-19 98.6 126 42.9
Lj3g0019237 Lotus japonicus HOM05D002908 ORTHO05D009379 1.0e-18 97.8 119 46.2
TWI12G0304 Tripterygium wilfordii HOM05D002908 ORTHO05D009379 3.8e-18 95.9 105 49.5
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 5.0e-18 95.5 122 44.3
Ciclev10026419m.g Citrus clementina HOM05D002908 ORTHO05D009379 6.5e-18 95.1 138 40.6
Glyma.08G203300 Glycine max HOM05D002908 ORTHO05D009379 6.5e-18 95.1 113 42.5
Glyma.07G018300 Glycine max HOM05D002908 ORTHO05D009379 8.5e-18 94.7 117 44.4
TPR.G14812 Trifolium pratense HOM05D002908 ORTHO05D009379 1.5e-17 94.0 119 43.7
Gohir.D10G069366 Gossypium hirsutum HOM05D002908 ORTHO05D009379 1.9e-17 93.6 189 37.6
Sabra03G0027600 Salix brachista HOM05D002908 ORTHO05D009379 2.5e-17 93.2 126 42.1
Gohir.A10G067500 Gossypium hirsutum HOM05D002908 ORTHO05D009379 5.5e-17 92.0 189 37.0
Gorai.011G073200 Gossypium raimondii HOM05D002908 ORTHO05D009379 5.5e-17 92.0 189 37.0
Medtr8g013670 Medicago truncatula HOM05D002908 ORTHO05D009379 5.5e-17 92.0 140 35.7
Potri.003G051400 Populus trichocarpa HOM05D002908 ORTHO05D009379 7.2e-17 91.7 126 41.3
Lalb_Chr25g0280051 Lupinus albus HOM05D002908 ORTHO05D009379 1.6e-16 90.5 109 42.2
THA.LOC104813552 Tarenaya hassleriana HOM05D002908 ORTHO05D009379 2.7e-16 89.7 100 49.0
Aa31LG4G30 Aethionema arabicum HOM05D002908 ORTHO05D009379 3.6e-16 89.4 187 34.8
arahy.Tifrunner.gnm1.ann1.X9C74S Arachis hypogaea HOM05D002908 ORTHO05D009379 3.6e-16 89.4 119 40.3
MBI14_g25895_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D009379 4.7e-16 89.0 105 46.7
BraA04t16812Z Brassica rapa HOM05D002908 ORTHO05D009379 6.1e-16 88.6 184 35.3
CARHR063820 Cardamine hirsuta HOM05D002908 ORTHO05D009379 6.1e-16 88.6 190 32.1
COL.COLO4_30460 Corchorus olitorius HOM05D002908 ORTHO05D009379 6.1e-16 88.6 192 35.4
Sp5g35960 Schrenkiella parvula HOM05D002908 ORTHO05D009379 6.1e-16 88.6 184 34.2
MBI14_g37138_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D009379 8.0e-16 88.2 105 46.7
A04p11470 Brassica napus HOM05D002908 ORTHO05D009379 1.0e-15 87.8 184 35.3
Lalb_Chr01g0013071 Lupinus albus HOM05D002908 ORTHO05D009379 1.0e-15 87.8 109 43.1
arahy.Tifrunner.gnm1.ann1.X2Q1EE Arachis hypogaea HOM05D002908 ORTHO05D009379 1.4e-15 87.4 118 39.8
Carub.0002s2770 Capsella rubella HOM05D002908 ORTHO05D009379 1.4e-15 87.4 185 33.5
Thhalv10019037m.g Eutrema salsugineum HOM05D002908 ORTHO05D009379 1.8e-15 87.0 186 33.3
Duzib235G0884 Durio zibethinus HOM05D002908 ORTHO05D009379 2.3e-15 86.7 124 43.5
Aqoxy366s001 Aquilegia oxysepala HOM05D002908 ORTHO05D009379 4.0e-15 85.9 89 47.2
C04p45170 Brassica napus HOM05D002908 ORTHO05D009379 4.0e-15 85.9 184 35.3
BolC4t26097H Brassica oleracea HOM05D002908 ORTHO05D009379 4.0e-15 85.9 184 35.3
AL5G17200 Arabidopsis lyrata HOM05D002908 ORTHO05D009379 5.2e-15 85.5 184 31.5
BcaC02g09652 Brassica carinata HOM05D002908 ORTHO05D009379 6.7e-15 85.1 184 34.8
AT3G27750 Arabidopsis thaliana HOM05D002908 ORTHO05D009379 1.5e-14 84.0 184 31.5
Atru.chr1.3417 Acer truncatum HOM05D002908 ORTHO05D009379 3.3e-14 82.8 138 37.7
Thecc.06G094800 Theobroma cacao HOM05D002908 ORTHO05D009379 4.4e-14 82.4 124 43.5
Cpa.g.sc109.48 Carica papaya HOM05D002908 ORTHO05D009379 2.8e-13 79.7 187 33.7
BcaB06g27228 Brassica carinata HOM05D002908 ORTHO05D009379 6.3e-13 78.6 184 33.2
Duzib192G0150 Durio zibethinus HOM05D002908 ORTHO05D009379 6.3e-13 78.6 124 41.9
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.8e-12 77.0 84 48.8
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-12 75.9 82 50.0
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 4.1e-12 75.9 84 52.4
CDE05G0493 Ceratophyllum demersum HOM05D002908 ORTHO05D009379 1.2e-11 74.3 121 35.5
ATR0759G099 Amborella trichopoda HOM05D002908 ORTHO05D009379 2.0e-11 73.6 106 38.7
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.5e-11 72.8 79 50.6
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 5.9e-11 72.0 71 54.9
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.0e-10 71.2 84 46.4
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-10 69.3 87 46.0
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.8e-10 69.3 94 43.6
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.5e-10 68.6 121 36.4
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.5e-10 68.6 121 36.4
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.5e-10 68.6 94 42.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.5e-10 68.2 87 44.8
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.5e-10 68.2 82 45.1
QL05p018811 Quercus lobata HOM05D000009 ORTHO05D000008 9.4e-09 64.7 84 45.2
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.1e-08 63.5 87 41.4
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-08 63.2 84 45.2
QL09p048610 Quercus lobata HOM05D000368 ORTHO05D009379 2.7e-08 63.2 83 44.6
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.6e-08 62.8 79 44.3
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-08 62.8 88 38.6
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 3.6e-08 62.8 79 41.8
CSS0035533 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.1e-08 62.0 84 44.0
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.0e-07 61.2 82 42.7
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 1.4e-07 60.8 73 42.5
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.4e-07 60.8 83 39.8
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.0e-07 59.7 78 43.6
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.8e-07 58.5 78 39.7
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 8.8e-07 58.2 73 39.7
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-06 57.4 82 40.2
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-06 57.4 79 40.5
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.5e-06 57.4 92 35.9
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.0e-06 57.0 91 35.2
Os04g0475500 Oryza sativa ssp. japonica HOM05D001620 ORTHO05D005461 2.6e-06 56.6 105 35.2


User provided reference genes

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