Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim10G0136100 Rhododendron simsii HOM05D005401 ORTHO05D006582 4.7e-242 840.9 454 100.0
RhsimUnG0132800 Rhododendron simsii HOM05D005401 ORTHO05D006582 4.8e-231 804.3 529 79.6
vmacro12864 Vaccinium macrocarpon HOM05D005401 ORTHO05D006582 2.0e-205 719.2 475 77.9
Actinidia06639 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.9e-203 712.6 454 85.0
Dinv03731 Davidia involucrata HOM05D005401 ORTHO05D006582 1.0e-196 690.3 456 81.8
Dinv24333 Davidia involucrata HOM05D005401 ORTHO05D006582 1.1e-187 660.2 460 72.6
Haze_25113 Corylus avellana HOM05D005401 ORTHO05D006582 3.4e-184 648.7 453 77.9
CiPaw.03G129100 Carya illinoinensis HOM05D005401 ORTHO05D006582 6.4e-183 644.4 453 77.9
Hma1.2p1_0528F.1_g173030 Hydrangea macrophylla HOM05D005401 ORTHO05D006582 1.2e-181 640.2 454 78.2
TWI79G0453 Tripterygium wilfordii HOM05D005401 ORTHO05D006582 1.9e-179 632.9 453 75.7
CSS0027531 Camellia sinensis var. sinensis HOM05D005401 ORTHO05D006582 1.4e-177 626.7 500 66.2
Duzib147G0934 Durio zibethinus HOM05D005401 ORTHO05D006582 5.3e-177 624.8 454 75.6
Thecc.01G128200 Theobroma cacao HOM05D005401 ORTHO05D006582 2.6e-176 622.5 454 75.1
QL06p029214 Quercus lobata HOM05D005401 ORTHO05D006582 9.9e-176 620.5 496 70.6
Gohir.D11G230200 Gossypium hirsutum HOM05D005401 ORTHO05D006582 2.2e-175 619.4 453 70.6
GSVIVG01026512001 Vitis vinifera HOM05D005401 ORTHO05D006582 4.9e-175 618.2 454 74.7
Manes.13G082700 Manihot esculenta HOM05D005401 ORTHO05D006582 1.1e-174 617.1 454 73.8
Potri.007G108200 Populus trichocarpa HOM05D005401 ORTHO05D006582 5.4e-174 614.8 454 68.3
Gohir.A11G221000 Gossypium hirsutum HOM05D005401 ORTHO05D006582 7.1e-174 614.4 453 75.3
Gorai.003G067300 Gossypium raimondii HOM05D005401 ORTHO05D006582 9.3e-174 614.0 454 68.3
Prupe.6G159400 Prunus persica HOM05D005401 ORTHO05D006582 9.3e-174 614.0 428 77.3
HanXRQChr04g0116521 Helianthus annuus HOM05D005401 ORTHO05D006582 1.6e-173 613.2 470 72.1
Gohir.A11G226902 Gossypium hirsutum HOM05D005401 ORTHO05D006582 2.7e-173 612.5 454 68.3
Lsat_1_v5_gn_7_27421 Lactuca sativa HOM05D005401 ORTHO05D006582 4.6e-173 611.7 480 68.1
TAR628G0360 Trochodendron aralioides HOM05D005401 ORTHO05D006582 1.9e-171 606.3 465 69.0
Nn1g06207 Nelumbo nucifera HOM05D005401 ORTHO05D006582 1.3e-170 603.6 465 72.3
Cfa002819 Carpinus fangiana HOM05D005401 ORTHO05D006582 1.4e-169 600.1 453 73.5
Cc07_g18120 Coffea canephora HOM05D005401 ORTHO05D006582 5.3e-169 598.2 454 65.9
ECA236G1881 Erigeron canadensis HOM05D005401 ORTHO05D006582 5.3e-169 598.2 457 72.0
CANSAT01G1454 Cannabis sativa HOM05D005401 ORTHO05D006582 2.0e-168 596.3 456 66.0
DCAR_001363 Daucus carota HOM05D005401 ORTHO05D006582 1.1e-166 590.5 486 69.1
AUR62003599 Chenopodium quinoa HOM05D005401 ORTHO05D006582 9.3e-166 587.4 463 71.5
Sc16g0003880 Simmondsia chinensis HOM05D005401 ORTHO05D006582 9.3e-166 587.4 454 71.4
Ciclev10000834m.g Citrus clementina HOM05D005401 ORTHO05D006582 1.6e-165 586.6 428 70.8
Carub.0008s2542 Capsella rubella HOM05D005401 ORTHO05D006582 3.0e-164 582.4 468 62.0
Oeu024886.1 Olea europaea HOM05D005401 ORTHO05D006582 6.7e-164 581.3 466 71.7
PGR102G1978 Punica granatum HOM05D005401 ORTHO05D006582 6.7e-164 581.3 463 70.6
Sopen11g001760 Solanum pennellii HOM05D005401 ORTHO05D006582 1.9e-163 579.7 454 71.4
Solyc11g005800.2 Solanum lycopersicum HOM05D005401 ORTHO05D006582 3.3e-163 578.9 454 71.6
Lj4A848G70 Lonicera japonica HOM05D005401 ORTHO05D006582 4.3e-163 578.6 505 62.8
THA.LOC104799501 Tarenaya hassleriana HOM05D005401 ORTHO05D006582 5.6e-163 578.2 467 61.5
AL8G42040 Arabidopsis lyrata HOM05D005401 ORTHO05D006582 2.1e-162 576.2 486 59.7
COL.COLO4_14025 Corchorus olitorius HOM05D005401 ORTHO05D006582 3.7e-162 575.5 487 68.2
AT5G64630 Arabidopsis thaliana HOM05D005401 ORTHO05D006582 6.2e-162 574.7 486 62.8
BcaB02g09807 Brassica carinata HOM05D005401 ORTHO05D006582 1.4e-161 573.5 483 59.6
PGSC0003DMG400028676 Solanum tuberosum HOM05D005401 ORTHO05D006582 3.1e-161 572.4 461 70.5
Sed0020894 Sechium edule HOM05D005401 ORTHO05D006582 5.3e-161 571.6 482 67.0
AUR62017910 Chenopodium quinoa HOM05D005401 ORTHO05D006582 6.9e-161 571.2 479 62.4
CsaV3_6G041720 Cucumis sativus L. HOM05D005401 ORTHO05D006582 1.5e-160 570.1 482 68.7
Eucgr.H04948 Eucalyptus grandis HOM05D005401 ORTHO05D006582 1.5e-160 570.1 461 69.8
MSTRG.23445 Avicennia marina HOM05D005401 ORTHO05D006582 2.6e-160 569.3 464 62.7
PSO170G5022 Papaver somniferum HOM05D005401 ORTHO05D006582 2.6e-160 569.3 457 64.3
BraA06t26078Z Brassica rapa HOM05D005401 ORTHO05D006582 1.7e-159 566.6 483 65.8
MD01G1002400 Malus domestica HOM05D005401 ORTHO05D006582 3.8e-159 565.5 505 65.0
Migut.H00736 Erythranthe guttata HOM05D005401 ORTHO05D006582 8.4e-159 564.3 464 62.1
BcaC01g02694 Brassica carinata HOM05D005401 ORTHO05D006582 7.1e-158 561.2 492 58.7
C03p61560 Brassica napus HOM05D005401 ORTHO05D006582 7.1e-158 561.2 492 58.7
Ah.02g121770 Amaranthus hybridus HOM05D005401 ORTHO05D006582 1.2e-157 560.5 454 68.9
BolC3t18416H Brassica oleracea HOM05D005401 ORTHO05D006582 7.9e-157 557.8 499 58.1
EL10Ac7g17633 Beta vulgaris HOM05D005401 ORTHO05D006582 3.9e-156 555.4 472 68.0
PSO017G4890 Papaver somniferum HOM05D005401 ORTHO05D006582 9.7e-155 550.8 461 62.0
Nitab4.5_0000805g0050 Nicotiana tabacum HOM05D005401 ORTHO05D006582 3.7e-154 548.9 456 69.5
Aqoxy5G02178 Aquilegia oxysepala HOM05D005401 ORTHO05D006582 3.1e-153 545.8 494 62.8
Atru.chr4.842 Acer truncatum HOM05D005401 ORTHO05D006582 1.2e-152 543.9 426 66.0
Aa31LG1G17320 Aethionema arabicum HOM05D005401 ORTHO05D006582 3.2e-150 535.8 423 62.2
Sp2g27690 Schrenkiella parvula HOM05D005401 ORTHO05D006582 7.9e-149 531.2 486 62.6
MBI06_g43013_MAGBIO Magnolia biondii HOM05D005401 ORTHO05D006582 3.9e-148 528.9 473 58.6
ClCG01G015480 Citrullus lanatus HOM05D005401 ORTHO05D006582 2.5e-147 526.2 484 64.5
Thhalv10004101m.g Eutrema salsugineum HOM05D005401 ORTHO05D006582 2.5e-147 526.2 482 56.2
Ca_17644_v3 Cicer arietinum L. HOM05D005401 ORTHO05D006582 4.1e-145 518.8 423 61.0
Glyma.05G190800 Glycine max HOM05D005401 ORTHO05D006582 9.1e-145 517.7 423 61.7
Glyma.08G156200 Glycine max HOM05D005401 ORTHO05D006582 3.4e-144 515.8 422 61.8
CARHR278600 Cardamine hirsuta HOM05D005401 ORTHO05D006582 2.2e-143 513.1 493 61.1
EL10Ac6g15280 Beta vulgaris HOM05D005401 ORTHO05D006582 1.4e-142 510.4 548 53.5
HPP92_001192 Vanilla planifolia HOM05D005401 ORTHO05D006582 3.2e-142 509.2 456 57.9
Lalb_Chr12g0203191 Lupinus albus HOM05D005401 ORTHO05D006582 4.2e-142 508.8 428 61.4
Psat7g046640 Pisum sativum HOM05D005401 ORTHO05D006582 2.7e-141 506.1 423 59.8
Lalb_Chr13g0296571 Lupinus albus HOM05D005401 ORTHO05D006582 1.4e-140 503.8 424 60.8
Os08g0108200 Oryza sativa ssp. japonica HOM05D005401 ORTHO05D006582 1.8e-140 503.4 425 58.8
Phvul.002G271200 Phaseolus vulgaris HOM05D005401 ORTHO05D006582 4.4e-139 498.8 432 59.0
Peaxi162Scf00012g01522 Petunia axillaris HOM05D005401 ORTHO05D006582 1.4e-137 493.8 460 65.4
RcHm_v2.0_Chr2g0120381 Rosa chinensis HOM05D005401 ORTHO05D006582 2.4e-137 493.0 414 67.9
ATR1136G147 Amborella trichopoda HOM05D005401 ORTHO05D006582 5.3e-137 491.9 466 56.9
FAN23G2510 Fragaria x ananassa HOM05D005401 ORTHO05D006582 9.1e-137 491.1 417 60.2
VMungo0251G3661 Vigna mungo HOM05D005401 ORTHO05D006582 5.9e-136 488.4 427 59.3
Nitab4.5_0000877g0070 Nicotiana tabacum HOM05D005401 ORTHO05D006582 1.9e-134 483.4 456 58.1
Lalb_Chr00c34g0408611 Lupinus albus HOM05D005401 ORTHO05D006582 4.2e-134 482.3 428 59.6
A06p31360 Brassica napus HOM05D005401 ORTHO05D006582 6.1e-133 478.4 486 51.6
FvH4_1g24150 Fragaria vesca HOM05D005401 ORTHO05D006582 1.4e-132 477.2 414 65.2
MELO3C008048.2 Cucumis melo HOM05D005401 ORTHO05D006582 1.5e-131 473.8 329 79.6
Hund08501 Selenicereus undatus HOM05D005401 ORTHO05D006582 5.7e-131 471.9 454 61.2
Zm00001eb260310 Zea mays HOM05D005401 ORTHO05D006582 7.4e-131 471.5 513 51.1
CDE02G0389 Ceratophyllum demersum HOM05D005401 ORTHO05D006582 1.7e-130 470.3 463 60.5
Medtr8g093540 Medicago truncatula HOM05D005401 ORTHO05D006582 4.5e-128 462.2 423 56.7
Lj4g0023934 Lotus japonicus HOM05D005401 ORTHO05D006582 3.6e-125 452.6 424 55.9
SHI11477 Sapria himalayana HOM05D005401 ORTHO05D006582 2.6e-123 446.4 466 58.2
arahy.Tifrunner.gnm1.ann1.N6RYVU Arachis hypogaea HOM05D005401 ORTHO05D006582 3.7e-122 442.6 424 54.2
arahy.Tifrunner.gnm1.ann1.LMDE4E Arachis hypogaea HOM05D005401 ORTHO05D006582 4.8e-122 442.2 423 54.4
FAN26G1589 Fragaria x ananassa HOM05D005401 ORTHO05D006582 2.4e-121 439.9 414 63.3
FAN28G1662 Fragaria x ananassa HOM05D005401 ORTHO05D006582 5.9e-120 435.3 414 62.8
HPP92_001165 Vanilla planifolia HOM05D005401 ORTHO05D006582 1.5e-118 430.6 379 59.1
SGA_v2.0_scaffold355G49767 Striga asiatica HOM05D005401 ORTHO05D006582 9.8e-115 417.9 460 57.8
Sabra07G0088600 Salix brachista HOM05D005401 ORTHO05D006582 1.7e-114 417.2 408 56.4
FAN19G2420 Fragaria x ananassa HOM05D005401 ORTHO05D006582 4.8e-114 415.6 415 60.7
unitig_899.g14701 Utricularia gibba HOM05D005401 ORTHO05D006582 3.0e-108 396.4 456 51.1
AUR62043710 Chenopodium quinoa HOM05D005401 ORTHO05D006582 4.5e-104 382.5 397 55.2
Mapoly0080s0001 Marchantia polymorpha HOM05D005401 ORTHO05D006582 4.6e-96 355.9 414 47.1
TPR.G37327 Trifolium pratense HOM05D005401 ORTHO05D006582 6.0e-96 355.5 296 60.5
AagrBONN_evm.TU.Sc2ySwM_117.3371 Anthoceros agrestis HOM05D005401 ORTHO05D006582 3.9e-95 352.8 498 48.2
Actinidia20088 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.8e-84 317.4 205 79.5
CBR_g20440 Chara braunii HOM05D005401 ORTHO05D006582 2.2e-82 310.5 406 44.1
SEGI_26195 Sequoiadendron giganteum HOM05D005401 ORTHO05D006582 5.8e-75 285.8 250 70.8
HanXRQChr04g0116511 Helianthus annuus HOM05D005401 ORTHO05D006582 3.5e-72 276.6 296 50.0
Cc06_g17340 Coffea canephora HOM05D005401 ORTHO05D006582 9.0e-68 261.9 248 55.2
Pp3c1_14660 Physcomitrium patens HOM05D005401 ORTHO05D006582 5.4e-65 252.7 470 42.8
Pp3c1_14663 Physcomitrium patens HOM05D005401 ORTHO05D006582 5.4e-65 252.7 470 42.8
Cc00_g25980 Coffea canephora HOM05D005401 ORTHO05D006582 6.6e-63 245.7 208 63.0
Cc06_g17330 Coffea canephora HOM05D005401 ORTHO05D006582 4.3e-62 243.0 206 63.1
PRCOL_00001389 Prasinoderma coloniale HOM05D005401 ORTHO05D006582 2.6e-59 233.8 500 32.8
Cc00_g32180 Coffea canephora HOM05D005401 ORTHO05D006582 2.6e-51 207.2 179 61.5
Cc00_g35900 Coffea canephora HOM05D005401 ORTHO05D006582 2.1e-48 197.6 114 79.8
MD15G1342000 Malus domestica HOM05D005401 ORTHO05D006582 1.5e-46 191.4 240 45.8
SEGI_17010 Sequoiadendron giganteum HOM05D005401 ORTHO05D006582 4.8e-45 186.4 251 47.0
Cpa.g.sc42.131 Carica papaya HOM05D005401 ORTHO05D006582 6.2e-45 186.0 199 53.3
BcaB02g09802 Brassica carinata HOM05D005401 ORTHO05D006582 8.2e-45 185.7 209 51.2
MCO05G520 Micromonas commoda HOM05D005401 ORTHO05D006582 5.8e-43 179.5 476 28.6
TPR.G8435 Trifolium pratense HOM05D005401 ORTHO05D006582 7.4e-38 162.5 151 55.6
Actinidia08420 Actinidia chinensis HOM05D005401 ORTHO05D006582 1.5e-35 154.8 81 88.9
MD15G1342300 Malus domestica HOM05D005401 ORTHO05D006582 5.1e-31 139.8 114 67.5
Cpa.g.c33663 Carica papaya HOM05D005401 ORTHO05D006582 5.7e-30 136.3 75 82.7
ClCG01G015490 Citrullus lanatus HOM05D005401 ORTHO05D006582 2.2e-29 134.4 81 74.1
CDE10G0537 Ceratophyllum demersum HOM05D005401 ORTHO05D006582 4.5e-27 126.7 110 58.2
Cfa027226 Carpinus fangiana HOM05D005401 ORTHO05D006582 1.4e-25 121.7 230 32.6
Cpa.g.sc3234.2 Carica papaya HOM05D005401 ORTHO05D006582 4.7e-24 116.7 67 79.1
PRCOL_00000149 Prasinoderma coloniale HOM05D003901 ORTHO05D004511 1.8e-23 114.8 465 25.6
Cfa026613 Carpinus fangiana HOM05D003901 ORTHO05D004511 4.8e-21 106.7 423 23.4
Cre13.g575950 Chlamydomonas reinhardtii HOM05D003901 ORTHO05D004511 2.5e-17 94.4 391 23.0
VMungo0251G1870 Vigna mungo HOM05D000140 ORTHO05D004393 4.2e-17 93.6 84 52.4
BcaB02g09805 Brassica carinata HOM05D005401 ORTHO05D006582 6.1e-16 89.7 266 32.0
HanXRQChr04g0116501 Helianthus annuus HOM05D005401 ORTHO05D006582 2.4e-12 77.8 39 82.1
SMO139G0105 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 7.0e-12 76.3 409 22.2
SMO165G0087 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 7.0e-12 76.3 409 22.2
Thecc.09G286400 Theobroma cacao HOM05D003901 ORTHO05D004511 1.6e-11 75.1 259 25.1
Psat1g035320 Pisum sativum HOM05D005401 ORTHO05D006582 4.5e-11 73.6 55 65.5
Zm00001eb121570 Zea mays HOM05D003901 ORTHO05D004511 5.9e-11 73.2 430 22.1
MCO11G428 Micromonas commoda HOM05D003901 ORTHO05D004511 7.7e-11 72.8 462 21.6
Psat7g085120 Pisum sativum HOM05D005401 ORTHO05D006582 1.0e-10 72.4 55 63.6
Ah.08g215860 Amaranthus hybridus HOM05D003901 ORTHO05D004511 1.3e-10 72.0 429 21.2
Atru.chr3.3302 Acer truncatum HOM05D003901 ORTHO05D004511 2.2e-10 71.2 259 24.3
CDE06G1793 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 2.2e-10 71.2 323 24.1
MCO11G429 Micromonas commoda HOM05D003901 ORTHO05D004511 2.9e-10 70.9 447 21.5
RcHm_v2.0_Chr1g0317731 Rosa chinensis HOM05D003901 ORTHO05D004511 3.8e-10 70.5 261 23.8
Os09g0567700 Oryza sativa ssp. japonica HOM05D003901 ORTHO05D004511 5.0e-10 70.1 411 21.4
Zm00001eb307860 Zea mays HOM05D003901 ORTHO05D004511 5.0e-10 70.1 472 21.6
FvH4_3g24580 Fragaria vesca HOM05D003901 ORTHO05D004511 6.5e-10 69.7 260 23.5
Psat4g107600 Pisum sativum HOM05D005401 ORTHO05D006582 6.5e-10 69.7 53 62.3
Psat5g256560 Pisum sativum HOM05D003901 ORTHO05D004511 2.5e-09 67.8 316 22.5
Lj3g0011305 Lotus japonicus HOM05D005401 ORTHO05D006582 4.2e-09 67.0 66 47.0
Manes.04G005300 Manihot esculenta HOM05D003901 ORTHO05D004511 4.2e-09 67.0 316 22.8
AUR62009782 Chenopodium quinoa HOM05D003901 ORTHO05D004511 1.2e-08 65.5 477 20.3
Carub.0005s1017 Capsella rubella HOM05D003901 ORTHO05D004511 2.3e-07 61.2 409 20.8
CARHR104350 Cardamine hirsuta HOM05D003901 ORTHO05D004511 1.2e-06 58.9 493 19.9
Psat7g237960 Pisum sativum HOM05D005401 ORTHO05D006582 7.5e-06 56.2 42 61.9


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