Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 6.6e-137 490.7 251 100.0
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 3.4e-69 265.8 192 70.3
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 3.8e-60 235.7 182 64.8
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 1.4e-57 227.3 182 59.9
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 3.9e-57 225.7 182 65.9
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 9.7e-56 221.1 182 59.9
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 1.1e-54 217.6 181 60.2
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 5.9e-53 211.8 200 56.0
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 1.7e-52 210.3 182 57.7
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 8.5e-52 208.0 182 55.5
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 1.1e-51 207.6 182 56.0
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.6e-50 203.8 200 52.0
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 2.7e-50 203.0 182 54.4
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 7.9e-50 201.4 182 54.9
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.4e-49 200.7 182 56.0
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 1.8e-49 200.3 200 50.5
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 3.0e-49 199.5 185 55.7
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 3.0e-49 199.5 182 53.8
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 6.7e-49 198.4 182 53.8
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 6.7e-49 198.4 183 56.3
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 4.4e-48 195.7 182 52.2
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 7.4e-48 194.9 182 54.9
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 7.4e-48 194.9 195 51.8
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 1.7e-47 193.7 182 54.9
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 1.7e-47 193.7 182 56.6
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 4.8e-47 192.2 182 54.4
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 4.8e-47 192.2 184 56.0
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 8.2e-47 191.4 182 51.1
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 8.2e-47 191.4 182 53.3
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.1e-46 191.0 191 50.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 1.8e-46 190.3 182 51.6
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 5.3e-46 188.7 182 53.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 7.0e-46 188.3 180 52.8
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 7.0e-46 188.3 185 52.4
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.6e-45 187.2 178 52.8
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 2.0e-45 186.8 178 52.2
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 2.0e-45 186.8 182 52.7
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 2.6e-45 186.4 181 53.0
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 7.7e-45 184.9 180 49.4
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.7e-45 184.9 191 50.3
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 7.7e-45 184.9 182 50.5
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.0e-44 184.5 190 50.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.2e-44 183.3 200 48.5
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 2.9e-44 183.0 180 49.4
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 3.8e-44 182.6 184 51.6
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 8.5e-44 181.4 191 48.2
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 8.5e-44 181.4 182 50.5
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.5e-43 180.6 182 49.5
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 3.2e-43 179.5 180 49.4
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 7.2e-43 178.3 182 47.3
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 9.4e-43 177.9 180 48.9
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 3.6e-42 176.0 184 51.6
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.0e-41 174.5 180 51.7
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 2.3e-41 173.3 183 49.2
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.3e-41 173.3 182 47.3
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.3e-41 173.3 182 50.5
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.3e-41 173.3 182 50.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-41 172.6 182 45.6
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 4.0e-41 172.6 182 45.6
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 6.7e-41 171.8 182 48.4
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 8.8e-41 171.4 180 47.2
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 1.1e-40 171.0 183 47.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 4.4e-40 169.1 180 46.7
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 4.4e-40 169.1 180 46.7
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 7.5e-40 168.3 164 54.9
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.7e-39 167.2 182 45.6
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 2.2e-39 166.8 182 45.1
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 2.8e-39 166.4 183 47.5
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 3.7e-39 166.0 182 49.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 9.1e-38 161.4 185 46.5
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.2e-37 161.0 183 45.4
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.2e-37 161.0 182 44.5
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.2e-37 161.0 181 46.4
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 1.6e-37 160.6 183 45.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 2.0e-37 160.2 201 43.3
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 4.5e-37 159.1 180 46.1
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 7.7e-37 158.3 183 46.4
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.3e-36 157.5 180 45.6
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 1.7e-36 157.1 182 45.6
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.7e-36 157.1 182 45.6
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 3.8e-36 156.0 182 45.1
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 5.0e-36 155.6 182 44.5
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 5.0e-36 155.6 180 48.3
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 6.5e-36 155.2 182 44.5
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.5e-35 153.3 182 44.5
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 2.5e-35 153.3 182 44.5
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 4.2e-35 152.5 198 41.4
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 7.2e-35 151.8 180 44.4
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.6e-34 150.6 182 43.4
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 1.6e-34 150.6 166 50.0
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 4.7e-34 149.1 182 43.4
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.3e-33 146.7 182 41.8
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 3.0e-33 146.4 185 43.8
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 6.8e-33 145.2 187 40.6
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 4.8e-31 139.0 135 51.1
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 7.0e-30 135.2 158 44.9
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 7.2e-27 125.2 200 37.5
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 1.6e-26 124.0 182 40.1
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 1.3e-23 114.4 147 43.5
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.8e-22 110.5 168 38.7
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.8e-22 110.5 168 38.7
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 5.9e-21 105.5 182 35.7
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.0e-20 104.8 190 35.3
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 5.2e-17 92.4 109 42.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.7e-15 86.3 84 48.8
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.7e-15 86.3 84 48.8
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.7e-15 86.3 84 48.8
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.6e-13 80.9 133 39.8
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 2.3e-12 77.0 104 45.2
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 2.5e-11 73.6 61 52.5
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 1.2e-10 71.2 55 56.4
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 4.4e-08 62.8 100 35.0
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 9.8e-08 61.6 84 42.9


User provided reference genes

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