Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim02G0102400 Rhododendron simsii HOM05D001734 ORTHO05D003483 3.9e-268 927.5 471 100.0
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.7e-141 506.9 427 67.0
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.3e-138 497.3 422 66.6
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.8e-135 486.9 428 65.0
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 5.7e-126 455.3 428 61.2
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 2.2e-125 453.4 428 61.7
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 3.7e-125 452.6 428 61.2
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 9.1e-124 448.0 428 60.0
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.2e-123 447.6 428 60.3
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 2.7e-123 446.4 412 61.7
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 3.5e-123 446.0 425 60.5
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 7.7e-123 444.9 428 60.7
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 3.8e-122 442.6 435 57.7
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 6.6e-122 441.8 428 60.3
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 8.6e-122 441.4 432 59.5
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.1e-121 441.0 428 60.0
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.5e-121 440.7 428 60.0
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 2.5e-121 439.9 435 58.2
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 3.3e-121 439.5 428 59.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 3.3e-121 439.5 425 57.9
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.3e-121 439.5 426 59.4
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.2e-121 438.3 428 59.8
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 9.5e-121 438.0 425 59.3
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 1.2e-120 437.6 425 57.4
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.6e-120 437.2 428 59.6
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.6e-120 437.2 425 59.5
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 2.8e-120 436.4 428 60.0
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 2.8e-120 436.4 435 57.5
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 3.6e-120 436.0 435 57.7
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 6.1e-120 435.3 428 57.5
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.4e-119 434.1 425 58.6
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.8e-119 433.7 428 59.1
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.3e-119 433.3 430 58.8
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 4.0e-119 432.6 425 58.6
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 5.2e-119 432.2 418 59.6
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.2e-118 431.0 428 58.9
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 4.4e-118 429.1 428 57.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 5.7e-118 428.7 429 57.1
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 7.5e-118 428.3 428 58.2
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 1.3e-117 427.6 430 59.1
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 2.2e-117 426.8 427 58.1
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.2e-117 426.8 425 57.9
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.7e-117 426.0 419 57.5
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 3.7e-117 426.0 407 58.2
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 8.3e-117 424.9 410 59.3
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 1.1e-116 424.5 425 57.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.1e-116 422.9 430 58.1
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 5.4e-116 422.2 428 56.3
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 9.2e-116 421.4 428 58.2
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 9.2e-116 421.4 412 59.0
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 9.2e-116 421.4 428 57.7
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.2e-115 421.0 425 57.9
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.0e-115 420.2 429 56.6
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 2.7e-115 419.9 425 56.7
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.0e-114 417.9 412 56.1
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.7e-114 417.2 428 56.8
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.3e-114 416.8 428 57.0
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 1.9e-113 413.7 378 64.0
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 4.3e-113 412.5 454 54.0
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 4.3e-113 412.5 433 55.4
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.6e-112 409.5 430 57.0
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 6.1e-112 408.7 404 55.4
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 1.0e-111 407.9 425 55.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-111 407.5 430 56.7
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.8e-111 407.1 404 55.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.4e-108 396.7 416 55.0
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 1.0e-106 391.3 413 55.2
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 8.6e-106 388.3 429 53.6
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 8.6e-106 388.3 411 55.0
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 8.6e-106 388.3 429 53.6
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 9.5e-105 384.8 429 52.9
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 3.6e-104 382.9 419 53.9
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 6.2e-104 382.1 437 51.9
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 8.0e-104 381.7 429 52.7
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 4.0e-103 379.4 413 53.0
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 5.2e-103 379.0 437 51.7
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 5.2e-103 379.0 437 51.7
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 3.7e-101 372.9 411 54.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 7.8e-99 365.2 410 52.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.7e-98 364.0 412 52.9
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 3.9e-98 362.8 409 53.5
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 9.5e-97 358.2 429 50.3
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 3.1e-95 353.2 469 48.2
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.9e-93 346.7 436 50.0
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 5.1e-90 335.9 428 49.3
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 8.9e-87 325.1 435 48.5
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.6e-83 314.3 414 48.6
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 4.6e-83 312.8 380 50.0
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.7e-82 310.8 349 51.9
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.9e-81 307.4 407 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 2.2e-77 293.9 392 44.4
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 4.9e-77 292.7 449 40.8
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.1e-76 288.9 430 44.4
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 3.0e-74 283.5 441 41.0
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 4.3e-65 253.1 388 40.7
MBI10_g06739_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 1.1e-60 238.4 217 61.3
TPR.G494 Trifolium pratense HOM05D001734 ORTHO05D003483 8.7e-58 228.8 210 59.5
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 3.8e-45 186.8 156 62.8
SGA_v2.0_scaffold990G53774 Striga asiatica HOM05D001734 ORTHO05D003483 5.1e-42 176.4 214 49.5
VMungo1309G0781 Vigna mungo HOM05D001734 ORTHO05D003483 5.7e-41 172.9 172 56.4
SHI16990 Sapria himalayana HOM05D001734 ORTHO05D003483 2.8e-40 170.6 229 47.6
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.8e-39 167.9 247 45.3
SEGI_23063 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 6.1e-35 152.9 143 55.9
SEGI_11837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 1.8e-34 151.4 209 47.8
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 8.8e-34 149.1 251 39.4
Medtr3g110870 Medicago truncatula HOM05D001734 ORTHO05D003483 8.2e-32 142.5 107 65.4
MBI10_g06738_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 1.5e-30 138.3 129 58.1
Lsat_1_v5_gn_9_85140 Lactuca sativa HOM05D001734 ORTHO05D003483 4.7e-27 126.7 102 62.7
PSO675G3963 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-26 125.2 129 55.8
Medtr7g026890 Medicago truncatula HOM05D001734 ORTHO05D003483 2.4e-23 114.4 116 51.7
Ah.11g051590 Amaranthus hybridus HOM05D001734 ORTHO05D003483 5.0e-21 106.7 134 50.0
Medtr4g071250 Medicago truncatula HOM05D001734 ORTHO05D003483 9.4e-20 102.4 93 54.8
SHI16987 Sapria himalayana HOM05D001734 ORTHO05D003483 1.6e-19 101.7 121 47.9
PSO017G2470 Papaver somniferum HOM05D001734 ORTHO05D003483 5.9e-14 83.2 142 38.7
QL07p004594 Quercus lobata HOM05D001734 ORTHO05D020518 5.0e-13 80.1 76 60.5
PRCOL_00001368 Prasinoderma coloniale HOM05D001734 ORTHO05D003483 8.8e-10 69.3 167 28.7
CBR_g295 Chara braunii HOM05D007859 ORTHO05D009320 4.5e-06 57.0 82 45.1


User provided reference genes

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