Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 4.9e-88 327.8 167 100.0
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.3e-61 240.0 140 89.3
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 3.0e-61 238.8 129 95.3
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.3e-60 235.0 129 91.5
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 4.3e-60 235.0 129 91.5
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 1.3e-59 233.4 129 89.9
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 6.2e-59 231.1 129 89.9
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.8e-58 229.6 129 89.1
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 3.4e-57 225.3 129 86.0
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 4.5e-57 224.9 129 89.1
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 7.6e-57 224.2 129 85.3
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 7.6e-57 224.2 129 84.5
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 7.6e-57 224.2 129 84.5
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 1.7e-56 223.0 125 87.2
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 2.9e-56 222.2 129 83.7
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 4.9e-56 221.5 131 84.0
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 6.4e-56 221.1 129 82.9
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 6.4e-56 221.1 126 84.9
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 6.4e-56 221.1 126 84.9
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 6.4e-56 221.1 126 84.9
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 1.4e-55 219.9 130 84.6
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 1.9e-55 219.5 129 86.8
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 5.5e-55 218.0 128 83.6
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 1.2e-54 216.9 133 85.0
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.2e-54 216.9 129 80.6
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 2.7e-54 215.7 129 82.2
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.5e-54 215.3 126 83.3
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.6e-54 214.9 129 81.4
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 4.6e-54 214.9 147 76.2
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 7.9e-54 214.2 129 81.4
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.3e-53 213.4 129 80.6
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 1.3e-53 213.4 129 80.6
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 5.1e-53 211.5 129 79.8
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 6.7e-53 211.1 129 80.6
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 1.1e-52 210.3 129 79.1
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 1.9e-52 209.5 130 82.3
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 1.9e-52 209.5 124 80.6
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 3.3e-52 208.8 130 81.5
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 7.4e-52 207.6 130 80.8
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 7.4e-52 207.6 129 79.1
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 7.4e-52 207.6 124 79.8
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 9.6e-52 207.2 130 80.0
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 1.3e-51 206.8 129 79.8
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.6e-51 206.5 126 81.0
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 2.1e-51 206.1 125 83.2
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 2.1e-51 206.1 138 74.6
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 2.8e-51 205.7 124 79.8
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 8.2e-51 204.1 131 78.6
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 1.8e-50 203.0 130 76.9
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.8e-50 203.0 124 79.0
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 1.8e-50 203.0 130 80.0
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 3.1e-50 202.2 129 79.1
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 3.1e-50 202.2 131 77.9
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 3.1e-50 202.2 124 78.2
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 4.0e-50 201.8 130 79.2
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 6.9e-50 201.1 127 77.2
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 1.2e-49 200.3 124 78.2
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 1.2e-49 200.3 127 76.4
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 1.5e-49 199.9 126 78.6
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 1.5e-49 199.9 126 74.6
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 2.0e-49 199.5 127 76.4
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 2.6e-49 199.1 127 75.6
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 2.6e-49 199.1 126 77.8
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 3.4e-49 198.7 124 76.6
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 4.5e-49 198.4 130 76.2
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 4.5e-49 198.4 127 74.8
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.6e-49 197.6 129 76.7
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 1.3e-48 196.8 131 76.3
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 2.9e-48 195.7 124 75.8
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 2.9e-48 195.7 126 77.0
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 6.5e-48 194.5 126 77.8
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 6.5e-48 194.5 126 77.8
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 6.5e-48 194.5 140 71.4
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-47 193.7 127 73.2
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 1.9e-47 193.0 128 75.8
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 4.2e-47 191.8 123 74.0
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 5.5e-47 191.4 127 74.8
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 5.5e-47 191.4 122 75.4
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 9.3e-47 190.7 127 71.7
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 9.3e-47 190.7 167 62.3
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.2e-46 190.3 127 71.7
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 1.2e-46 190.3 129 76.7
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 1.2e-46 190.3 124 72.6
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 2.1e-46 189.5 130 73.8
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 2.1e-46 189.5 122 76.2
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 3.5e-46 188.7 132 72.0
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 4.6e-46 188.3 127 70.9
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 1.3e-45 186.8 131 71.0
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.3e-45 186.8 132 70.5
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 1.8e-45 186.4 125 73.6
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 3.0e-45 185.7 124 71.0
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 5.1e-45 184.9 132 71.2
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 5.1e-45 184.9 104 87.5
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.1e-44 183.7 130 71.5
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 2.5e-44 182.6 122 74.6
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 3.3e-44 182.2 130 70.8
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 3.3e-44 182.2 126 69.8
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 4.3e-44 181.8 104 85.6
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 1.8e-42 176.4 156 62.8
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 6.9e-42 174.5 121 69.4
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.5e-41 173.3 100 82.0
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 3.4e-41 172.2 126 66.7
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 7.6e-41 171.0 128 67.2
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 1.3e-40 170.2 132 66.7
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 1.7e-40 169.9 128 64.8
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 1.7e-40 169.9 128 64.8
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 1.7e-40 169.9 128 64.8
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 2.2e-40 169.5 127 64.6
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 2.9e-40 169.1 125 68.0
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 3.8e-40 168.7 125 71.2
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 6.5e-40 167.9 120 71.7
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 1.4e-39 166.8 135 63.7
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 1.4e-39 166.8 121 67.8
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 2.5e-39 166.0 116 69.0
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 2.5e-39 166.0 116 69.0
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 4.2e-39 165.2 133 63.9
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 5.5e-39 164.9 120 65.8
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 5.5e-39 164.9 105 71.4
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 9.3e-39 164.1 111 71.2
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 1.2e-38 163.7 120 68.3
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.2e-38 163.7 104 75.0
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.2e-38 163.7 113 70.8
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 1.6e-38 163.3 167 52.7
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.6e-38 163.3 95 83.2
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.6e-38 161.8 92 84.8
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 3.0e-37 159.1 111 65.8
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 6.7e-37 157.9 96 78.1
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 8.8e-37 157.5 163 54.0
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.9e-36 156.4 133 57.9
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 2.5e-36 156.0 110 64.5
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 3.3e-36 155.6 129 62.0
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.7e-35 153.3 132 57.6
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 4.8e-35 151.8 129 58.1
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 4.1e-34 148.7 93 77.4
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 2.0e-33 146.4 87 79.3
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 7.7e-33 144.4 101 67.3
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 1.3e-32 143.7 127 59.8
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 6.5e-32 141.4 127 59.8
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 8.5e-32 141.0 82 87.8
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 8.5e-32 141.0 90 72.2
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 9.4e-31 137.5 117 59.0
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 1.5e-28 130.2 83 79.5
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.5e-28 130.2 84 75.0
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 5.3e-26 121.7 78 74.4
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 3.8e-24 115.5 69 79.7
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 6.5e-24 114.8 75 72.0
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 1.9e-23 113.2 94 57.4
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.5e-23 112.8 63 79.4
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 1.6e-22 110.2 61 88.5
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 3.6e-22 109.0 125 44.8
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 8.0e-22 107.8 95 56.8
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 1.1e-20 104.0 124 49.2
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 1.6e-17 93.6 77 62.3
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 5.9e-17 91.7 103 39.8
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 7.7e-17 91.3 89 50.6
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 1.2e-14 84.0 114 43.0
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 5.7e-12 75.1 47 72.3
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.3e-11 73.9 65 58.5
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 4.8e-11 72.0 93 37.6
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.0e-09 66.6 35 91.4


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