Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr7g0241821 Rosa chinensis HOM05D004786 ORTHO05D005582 2.0e-66 255.8 142 100.0
RcHm_v2.0_Chr4g0410491 Rosa chinensis HOM05D004786 ORTHO05D005582 2.2e-65 252.3 142 98.6
FAN13G1587 Fragaria x ananassa HOM05D004786 ORTHO05D005582 1.1e-64 250.0 142 97.2
FvH4_5g39500 Fragaria vesca HOM05D004786 ORTHO05D005582 5.5e-64 247.7 142 97.2
FAN18G2645 Fragaria x ananassa HOM05D004786 ORTHO05D005582 5.5e-64 247.7 142 97.2
FAN14G2614 Fragaria x ananassa HOM05D004786 ORTHO05D005582 7.4e-53 210.7 116 97.4
Prupe.2G036200 Prunus persica HOM05D004786 ORTHO05D005582 1.6e-52 209.5 118 89.8
CiPaw.08G091100 Carya illinoinensis HOM05D004786 ORTHO05D005582 1.1e-51 206.8 118 86.4
CANSAT01G0603 Cannabis sativa HOM05D004786 ORTHO05D005582 3.1e-51 205.3 118 88.1
QL12p029078 Quercus lobata HOM05D004786 ORTHO05D005582 6.9e-51 204.1 116 87.1
TWI18G0747 Tripterygium wilfordii HOM05D004786 ORTHO05D005582 9.1e-51 203.8 126 83.3
Glyma.10G001200 Glycine max HOM05D004786 ORTHO05D005582 2.0e-50 202.6 126 84.1
Haze_05017 Corylus avellana HOM05D004786 ORTHO05D005582 2.6e-50 202.2 123 82.9
Glyma.10G014500 Glycine max HOM05D004786 ORTHO05D005582 5.9e-50 201.1 126 83.3
arahy.Tifrunner.gnm1.ann1.BSR60Q Arachis hypogaea HOM05D004786 ORTHO05D005582 1.3e-49 199.9 123 82.9
QL02p082487 Quercus lobata HOM05D004786 ORTHO05D005582 1.3e-49 199.9 126 82.5
arahy.Tifrunner.gnm1.ann1.QQF2XI Arachis hypogaea HOM05D004786 ORTHO05D005582 2.2e-49 199.1 123 83.7
Gorai.011G094200 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.2e-49 199.1 123 81.3
Lj5g0024614 Lotus japonicus HOM05D004786 ORTHO05D005582 2.9e-49 198.7 126 81.7
Phvul.007G215700 Phaseolus vulgaris HOM05D004786 ORTHO05D005582 2.9e-49 198.7 123 82.1
arahy.Tifrunner.gnm1.ann1.7GX23T Arachis hypogaea HOM05D004786 ORTHO05D005582 5.0e-49 198.0 123 82.1
Gohir.D10G086000 Gossypium hirsutum HOM05D004786 ORTHO05D005582 5.0e-49 198.0 123 80.5
Ca_01909_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 6.5e-49 197.6 126 82.5
COL.COLO4_29184 Corchorus olitorius HOM05D004786 ORTHO05D005582 1.1e-48 196.8 123 81.3
Ciclev10002837m.g Citrus clementina HOM05D004786 ORTHO05D005582 1.9e-48 196.1 127 81.9
Thecc.04G020200 Theobroma cacao HOM05D004786 ORTHO05D005582 2.5e-48 195.7 139 74.8
Duzib147G1635 Durio zibethinus HOM05D004786 ORTHO05D005582 4.2e-48 194.9 123 80.5
Manes.02G090900 Manihot esculenta HOM05D004786 ORTHO05D005582 5.5e-48 194.5 123 79.7
CSS0028094 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 7.2e-48 194.1 126 77.8
HanXRQChr01g0000811 Helianthus annuus HOM05D004786 ORTHO05D005582 7.2e-48 194.1 118 80.5
arahy.Tifrunner.gnm1.ann1.U8589F Arachis hypogaea HOM05D004786 ORTHO05D005582 9.4e-48 193.7 123 80.5
Cc06_g14210 Coffea canephora HOM05D004786 ORTHO05D005582 9.4e-48 193.7 118 80.5
Potri.014G122500 Populus trichocarpa HOM05D004786 ORTHO05D005582 1.6e-47 193.0 124 79.0
TPR.G19757 Trifolium pratense HOM05D004786 ORTHO05D005582 1.6e-47 193.0 123 78.9
Ciclev10022845m.g Citrus clementina HOM05D004786 ORTHO05D005582 2.1e-47 192.6 124 81.5
Cpa.g.sc18.18 Carica papaya HOM05D004786 ORTHO05D005582 2.7e-47 192.2 118 83.9
PGR142G0252 Punica granatum HOM05D004786 ORTHO05D005582 3.6e-47 191.8 122 77.0
Rhsim01G0289800 Rhododendron simsii HOM05D004786 ORTHO05D005582 3.6e-47 191.8 126 77.0
Sabra14G0090900 Salix brachista HOM05D004786 ORTHO05D005582 3.6e-47 191.8 124 79.8
THA.LOC104801297 Tarenaya hassleriana HOM05D004786 ORTHO05D005582 3.6e-47 191.8 126 80.2
MELO3C015937.2 Cucumis melo HOM05D004786 ORTHO05D005582 6.1e-47 191.0 126 80.2
Hma1.2p1_0089F.1_g045460 Hydrangea macrophylla HOM05D004786 ORTHO05D005582 7.9e-47 190.7 116 81.0
Lalb_Chr11g0063261 Lupinus albus HOM05D004786 ORTHO05D005582 7.9e-47 190.7 126 80.2
Oeu047382.1 Olea europaea HOM05D004786 ORTHO05D005582 7.9e-47 190.7 118 79.7
Actinidia21008 Actinidia chinensis HOM05D004395 ORTHO05D005234 1.0e-46 190.3 126 75.4
CANSAT01G2201 Cannabis sativa HOM05D004786 ORTHO05D005582 1.4e-46 189.9 136 81.6
Dinv27220 Davidia involucrata HOM05D004786 ORTHO05D005582 1.4e-46 189.9 126 77.8
CsaV3_7G029840 Cucumis sativus L. HOM05D004786 ORTHO05D005582 2.3e-46 189.1 126 79.4
Gorai.001G266700 Gossypium raimondii HOM05D004786 ORTHO05D005582 2.3e-46 189.1 123 77.2
Sed0001914 Sechium edule HOM05D004786 ORTHO05D005582 3.9e-46 188.3 118 79.7
Nn4g25644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 5.1e-46 188.0 126 75.4
Aqoxy5G00800 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 8.8e-46 187.2 122 75.4
DCAR_002518 Daucus carota HOM05D004786 ORTHO05D005582 8.8e-46 187.2 123 74.8
Eucgr.C00116 Eucalyptus grandis HOM05D004786 ORTHO05D005582 8.8e-46 187.2 118 78.8
TAR636G2395 Trochodendron aralioides HOM05D004786 ORTHO05D005582 8.8e-46 187.2 122 76.2
Ca_10295_v3 Cicer arietinum L. HOM05D004786 ORTHO05D005582 1.1e-45 186.8 126 77.8
ECA248G3582 Erigeron canadensis HOM05D004786 ORTHO05D005582 1.1e-45 186.8 115 79.1
CAN.G1164.25 Capsicum annuum HOM05D004786 ORTHO05D005582 2.0e-45 186.0 126 75.4
FvH4_6g14960 Fragaria vesca HOM05D004786 ORTHO05D005582 2.0e-45 186.0 103 98.1
vmacro02412 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 2.0e-45 186.0 126 77.0
Migut.D00095 Erythranthe guttata HOM05D004786 ORTHO05D005582 2.6e-45 185.7 126 73.8
Gohir.A10G101800 Gossypium hirsutum HOM05D004786 ORTHO05D005582 4.4e-45 184.9 123 78.9
ClCG09G005230 Citrullus lanatus HOM05D004786 ORTHO05D005582 5.7e-45 184.5 125 77.6
Nitab4.5_0002158g0250 Nicotiana tabacum HOM05D004786 ORTHO05D005582 5.7e-45 184.5 118 76.3
Nitab4.5_0007940g0040 Nicotiana tabacum HOM05D004786 ORTHO05D005582 5.7e-45 184.5 118 76.3
MSTRG.21673 Avicennia marina HOM05D004786 ORTHO05D005582 7.4e-45 184.1 127 76.4
Rhsim13G0006100 Rhododendron simsii HOM05D004786 ORTHO05D005582 7.4e-45 184.1 126 76.2
vmacro15120 Vaccinium macrocarpon HOM05D004786 ORTHO05D005582 9.7e-45 183.7 126 74.6
PSO478G0620 Papaver somniferum HOM05D004786 ORTHO05D005582 1.7e-44 183.0 126 72.2
Psat6g162520 Pisum sativum HOM05D004786 ORTHO05D005582 1.7e-44 183.0 99 89.9
Solyc02g078300.3 Solanum lycopersicum HOM05D004786 ORTHO05D005582 1.7e-44 183.0 126 73.8
Sopen02g023150 Solanum pennellii HOM05D004786 ORTHO05D005582 1.7e-44 183.0 126 73.8
PGSC0003DMG400029688 Solanum tuberosum HOM05D004786 ORTHO05D005582 1.7e-44 183.0 126 73.8
Atru.chr5.1041 Acer truncatum HOM05D004786 ORTHO05D005582 3.7e-44 181.8 124 77.4
CSS0001467 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.7e-44 181.8 126 73.8
CSS0006628 Camellia sinensis var. sinensis HOM05D004786 ORTHO05D005582 3.7e-44 181.8 126 73.8
Nn3g21644 Nelumbo nucifera HOM05D004786 ORTHO05D005582 8.2e-44 180.6 116 75.9
Peaxi162Scf00736g00421 Petunia axillaris HOM05D004786 ORTHO05D005582 8.2e-44 180.6 123 72.4
PSO017G1185 Papaver somniferum HOM05D004786 ORTHO05D005582 1.1e-43 180.3 126 71.4
Medtr1g087370 Medicago truncatula HOM05D004786 ORTHO05D005582 1.8e-43 179.5 97 89.7
Ah.11g049360 Amaranthus hybridus HOM05D004786 ORTHO05D005582 3.1e-43 178.7 124 73.4
AUR62024675 Chenopodium quinoa HOM05D004786 ORTHO05D005582 4.1e-43 178.3 123 73.2
Solyc02g078285.1 Solanum lycopersicum HOM05D004786 ORTHO05D005582 9.1e-43 177.2 126 72.2
GSVIVG01028095001 Vitis vinifera HOM05D004786 ORTHO05D005582 1.2e-42 176.8 141 66.0
SGA_v2.0_scaffold376G50268 Striga asiatica HOM05D004786 ORTHO05D005582 2.0e-42 176.0 130 70.0
PSO478G2484 Papaver somniferum HOM05D004786 ORTHO05D005582 2.6e-42 175.6 126 69.8
Actinidia21415 Actinidia chinensis HOM05D004786 ORTHO05D005582 5.9e-42 174.5 130 73.1
SEGI_16103 Sequoiadendron giganteum HOM05D004786 ORTHO05D005582 5.9e-42 174.5 122 70.5
Oeu005869.1 Olea europaea HOM05D004786 ORTHO05D005582 7.7e-42 174.1 123 69.1
Atru.chr2.1244 Acer truncatum HOM05D004786 ORTHO05D005582 1.3e-41 173.3 127 72.4
EL10As5g23505 Beta vulgaris HOM05D004786 ORTHO05D005582 1.3e-41 173.3 124 71.8
Aqoxy2G02794 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 3.8e-41 171.8 117 71.8
unitig_736.g22945 Utricularia gibba HOM05D004786 ORTHO05D005582 6.5e-41 171.0 138 67.4
CDE02G4247 Ceratophyllum demersum HOM05D004786 ORTHO05D005582 8.5e-41 170.6 118 74.6
Zm00001eb131310 Zea mays HOM05D004786 ORTHO05D005582 2.5e-40 169.1 103 79.6
PSO384G2419 Papaver somniferum HOM05D004786 ORTHO05D005582 3.2e-40 168.7 127 67.7
Atru.chr2.1242 Acer truncatum HOM05D004786 ORTHO05D005582 5.5e-40 167.9 127 70.9
Os01g0338100 Oryza sativa ssp. japonica HOM05D004786 ORTHO05D005582 9.4e-40 167.2 103 78.6
Glyma.10G002500 Glycine max HOM05D004786 ORTHO05D005582 1.2e-39 166.8 106 82.1
PSO339G0583 Papaver somniferum HOM05D004786 ORTHO05D005582 1.2e-39 166.8 127 66.9
CARHR001960 Cardamine hirsuta HOM05D004786 ORTHO05D005582 1.6e-39 166.4 122 70.5
Sp1g01660 Schrenkiella parvula HOM05D004786 ORTHO05D005582 2.7e-39 165.6 127 68.5
Atru.chr5.1040 Acer truncatum HOM05D004786 ORTHO05D005582 6.1e-39 164.5 124 70.2
Thhalv10009111m.g Eutrema salsugineum HOM05D004786 ORTHO05D005582 6.1e-39 164.5 127 69.3
Hund02934 Selenicereus undatus HOM05D004786 ORTHO05D005582 7.9e-39 164.1 161 57.8
Sc05g0000530 Simmondsia chinensis HOM05D004786 ORTHO05D005582 7.9e-39 164.1 127 66.9
AT1G02680 Arabidopsis thaliana HOM05D004786 ORTHO05D005582 3.0e-38 162.2 111 72.1
Carub.0001s0173 Capsella rubella HOM05D004786 ORTHO05D005582 3.0e-38 162.2 122 69.7
SalBow3G4092 Salvia bowleyana HOM05D004786 ORTHO05D005582 3.0e-38 162.2 126 69.8
AL1G12010 Arabidopsis lyrata HOM05D004786 ORTHO05D005582 3.9e-38 161.8 126 68.3
BcaC07g36997 Brassica carinata HOM05D004786 ORTHO05D005582 3.9e-38 161.8 122 67.2
A10p01370 Brassica napus HOM05D004786 ORTHO05D005582 3.9e-38 161.8 122 68.9
C08p00190 Brassica napus HOM05D004786 ORTHO05D005582 3.9e-38 161.8 122 67.2
BolC8t46821H Brassica oleracea HOM05D004786 ORTHO05D005582 3.9e-38 161.8 122 67.2
A08p37600 Brassica napus HOM05D004786 ORTHO05D005582 6.7e-38 161.0 111 70.3
BraA08t35657Z Brassica rapa HOM05D004786 ORTHO05D005582 6.7e-38 161.0 111 70.3
BolC5t28917H Brassica oleracea HOM05D004786 ORTHO05D005582 2.6e-37 159.1 115 69.6
AUR62011833 Chenopodium quinoa HOM05D004786 ORTHO05D005582 2.6e-37 159.1 164 54.9
C05p01350 Brassica napus HOM05D004786 ORTHO05D005582 4.4e-37 158.3 115 69.6
AagrBONN_evm.TU.Sc2ySwM_228.4423 Anthoceros agrestis HOM05D004786 ORTHO05D005582 5.7e-37 157.9 113 65.5
Aqoxy293s004 Aquilegia oxysepala HOM05D004786 ORTHO05D005582 9.7e-37 157.1 152 57.9
BraA10t42413Z Brassica rapa HOM05D004786 ORTHO05D005582 9.7e-37 157.1 121 66.1
Aa31LG1G9890 Aethionema arabicum HOM05D004786 ORTHO05D005582 1.3e-36 156.8 158 56.3
AagrBONN_evm.TU.Sc2ySwM_344.2318 Anthoceros agrestis HOM05D004786 ORTHO05D005582 1.8e-35 152.9 119 62.2
SHI21583 Sapria himalayana HOM05D004786 ORTHO05D005582 1.8e-35 152.9 115 69.6
Gohir.A07G224200 Gossypium hirsutum HOM05D004786 ORTHO05D005582 7.0e-35 151.0 87 82.8
TAR633G1250 Trochodendron aralioides HOM05D004786 ORTHO05D005582 1.6e-34 149.8 90 81.1
AagrBONN_evm.TU.Sc2ySwM_362.2238 Anthoceros agrestis HOM05D004786 ORTHO05D005582 2.0e-34 149.4 123 57.7
Mapoly0033s0143 Marchantia polymorpha HOM05D004786 ORTHO05D005582 3.5e-34 148.7 134 59.0
Pp3c10_23650 Physcomitrium patens HOM05D004786 ORTHO05D005582 3.5e-34 148.7 108 63.0
Pp3c20_20300 Physcomitrium patens HOM05D004786 ORTHO05D005582 1.7e-33 146.4 107 63.6
Lsat_1_v5_gn_3_69620 Lactuca sativa HOM05D004786 ORTHO05D005582 1.1e-32 143.7 126 65.1
Mapoly0066s0092 Marchantia polymorpha HOM05D004786 ORTHO05D005582 1.1e-32 143.7 125 56.8
DCAR_030468 Daucus carota HOM05D004786 ORTHO05D005582 5.5e-32 141.4 95 72.6
arahy.Tifrunner.gnm1.ann1.8ER521 Arachis hypogaea HOM05D004786 ORTHO05D005582 9.4e-32 140.6 123 64.2
arahy.Tifrunner.gnm1.ann1.NH5DW8 Arachis hypogaea HOM05D004786 ORTHO05D005582 6.1e-31 137.9 123 64.2
VMungo0720G3029 Vigna mungo HOM05D003159 ORTHO05D005582 1.8e-30 136.3 114 65.8
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 6.7e-30 134.4 100 62.0
SMO172G0161 Selaginella moellendorffii HOM05D004786 ORTHO05D005582 1.5e-29 133.3 107 62.6
ATR0068G032 Amborella trichopoda HOM05D004786 ORTHO05D005582 4.4e-29 131.7 96 68.8
HPP92_025545 Vanilla planifolia HOM05D004786 ORTHO05D005582 2.8e-28 129.0 90 70.0
MD02G1287100 Malus domestica HOM05D004786 ORTHO05D005582 4.5e-26 121.7 69 84.1
Actinidia12745 Actinidia chinensis HOM05D004786 ORTHO05D005582 7.7e-26 120.9 77 77.9
BcaB03g15799 Brassica carinata HOM05D004786 ORTHO05D005582 2.5e-24 115.9 95 65.3
HanXRQChr04g0094601 Helianthus annuus HOM05D004786 ORTHO05D005582 2.5e-24 115.9 78 73.1
PGSC0003DMG400028899 Solanum tuberosum HOM05D000457 ORTHO05D000560 2.5e-24 115.9 77 70.1
BcaB03g13505 Brassica carinata HOM05D004786 ORTHO05D005582 3.2e-24 115.5 73 74.0
HPP92_025439 Vanilla planifolia HOM05D004786 ORTHO05D005582 1.4e-22 110.2 63 79.4
MCO05G258 Micromonas commoda HOM05D004786 ORTHO05D005582 1.5e-21 106.7 119 45.4
Solyc06g036200.2 Solanum lycopersicum HOM05D004786 ORTHO05D005582 3.7e-20 102.1 94 54.3
arahy.Tifrunner.gnm1.ann1.17AZVE Arachis hypogaea HOM05D004786 ORTHO05D005582 2.0e-18 96.3 123 49.6
Haze_27741 Corylus avellana HOM05D004786 ORTHO05D005582 7.7e-18 94.4 89 51.7
SGA_v2.0_scaffold334G49058 Striga asiatica HOM05D004395 ORTHO05D005234 1.7e-17 93.2 56 80.4
PRCOL_00006976 Prasinoderma coloniale HOM05D004786 ORTHO05D005582 5.0e-17 91.7 95 43.2
Dinv10078 Davidia involucrata HOM05D004786 ORTHO05D005582 1.4e-14 83.6 52 75.0
Cre04.g222100 Chlamydomonas reinhardtii HOM05D004786 ORTHO05D005582 1.2e-13 80.5 104 37.5
Cfa022415 Carpinus fangiana HOM05D004786 ORTHO05D005582 4.1e-11 72.0 93 35.5
Gohir.D07G231500 Gossypium hirsutum HOM05D004786 ORTHO05D005582 1.0e-09 67.4 57 59.6
MD02G1287200 Malus domestica HOM05D004786 ORTHO05D005582 1.0e-09 67.4 46 73.9
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 2.3e-06 56.2 90 30.0
SEGI_38506 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.8e-06 54.7 33 78.8


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