Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0367461 Rosa chinensis HOM05D002647 ORTHO05D002935 6.2e-29 130.2 69 100.0
RcHm_v2.0_Chr5g0000751 Rosa chinensis HOM05D002647 ORTHO05D002935 4.9e-18 94.0 136 48.5
FvH4_3g00550 Fragaria vesca HOM05D002647 ORTHO05D002935 1.2e-16 89.4 136 45.6
FAN25G3424 Fragaria x ananassa HOM05D002647 ORTHO05D002935 1.2e-16 89.4 136 45.6
FAN21G0336 Fragaria x ananassa HOM05D002647 ORTHO05D002935 7.8e-16 86.7 136 44.9
Prupe.4G006600 Prunus persica HOM05D002647 ORTHO05D002935 9.6e-14 79.7 136 41.9
Hund01566 Selenicereus undatus HOM05D002647 ORTHO05D002935 9.6e-14 79.7 103 49.5
QL05p068262 Quercus lobata HOM05D002647 ORTHO05D002935 2.1e-13 78.6 136 41.9
CiPaw.09G106700 Carya illinoinensis HOM05D002647 ORTHO05D002935 3.6e-13 77.8 136 42.6
QL05p068766 Quercus lobata HOM05D002647 ORTHO05D002935 8.1e-13 76.6 136 41.2
Manes.09G078400 Manihot esculenta HOM05D002647 ORTHO05D002935 1.4e-12 75.9 136 41.2
MD10G1336800 Malus domestica HOM05D002647 ORTHO05D002935 1.8e-12 75.5 136 40.4
CiPaw.10G080000 Carya illinoinensis HOM05D002647 ORTHO05D002935 2.4e-12 75.1 136 40.4
MD00G1057900 Malus domestica HOM05D002647 ORTHO05D002935 3.1e-12 74.7 136 40.4
Psat1g173600 Pisum sativum HOM05D002647 ORTHO05D002935 2.6e-11 71.6 136 39.0
BcaC07g37985 Brassica carinata HOM05D002647 ORTHO05D002935 3.4e-11 71.2 93 47.3
Sabra06G0012300 Salix brachista HOM05D002647 ORTHO05D002935 5.8e-11 70.5 136 37.5
Hund21138 Selenicereus undatus HOM05D002647 ORTHO05D002935 5.8e-11 70.5 134 40.3
vmacro15735 Vaccinium macrocarpon HOM05D002647 ORTHO05D002935 9.9e-11 69.7 123 39.8
AUR62021827 Chenopodium quinoa HOM05D002647 ORTHO05D002935 1.7e-10 68.9 136 38.2
Atru.chr1.2324 Acer truncatum HOM05D002647 ORTHO05D002935 2.2e-10 68.6 136 38.2
Glyma.09G012500 Glycine max HOM05D002647 ORTHO05D002935 2.2e-10 68.6 136 38.2
Duzib160G0097 Durio zibethinus HOM05D002647 ORTHO05D002935 2.9e-10 68.2 136 38.2
Gorai.006G082300 Gossypium raimondii HOM05D002647 ORTHO05D002935 2.9e-10 68.2 135 38.5
Gohir.A09G067900 Gossypium hirsutum HOM05D002647 ORTHO05D002935 6.4e-10 67.0 135 37.8
Dinv15367 Davidia involucrata HOM05D002647 ORTHO05D002935 1.1e-09 66.2 136 37.5
Lj6g0022085 Lotus japonicus HOM05D002647 ORTHO05D002935 1.1e-09 66.2 137 38.7
Cpa.g.sc27.250 Carica papaya HOM05D002647 ORTHO05D002935 1.4e-09 65.9 136 36.8
Cfa000058 Carpinus fangiana HOM05D002647 ORTHO05D002935 1.4e-09 65.9 136 37.5
Potri.006G017300 Populus trichocarpa HOM05D002647 ORTHO05D002935 1.4e-09 65.9 136 36.8
GSVIVG01003479001 Vitis vinifera HOM05D002647 ORTHO05D002935 1.4e-09 65.9 130 39.2
Dinv21285 Davidia involucrata HOM05D002647 ORTHO05D002935 1.9e-09 65.5 136 36.8
Gohir.D09G067900 Gossypium hirsutum HOM05D002647 ORTHO05D002935 1.9e-09 65.5 135 37.0
EL10Ac8g20241 Beta vulgaris HOM05D002647 ORTHO05D002935 2.4e-09 65.1 136 38.2
DCAR_021095 Daucus carota HOM05D002647 ORTHO05D002935 2.4e-09 65.1 136 35.3
Duzib235G1030 Durio zibethinus HOM05D002647 ORTHO05D002935 2.4e-09 65.1 136 36.8
Phvul.006G140900 Phaseolus vulgaris HOM05D002647 ORTHO05D002935 2.4e-09 65.1 138 37.7
Lalb_Chr15g0088111 Lupinus albus HOM05D002647 ORTHO05D002935 3.2e-09 64.7 136 36.8
Potri.016G007600 Populus trichocarpa HOM05D002647 ORTHO05D002935 5.4e-09 63.9 136 35.3
Thecc.06G237600 Theobroma cacao HOM05D002647 ORTHO05D002935 5.4e-09 63.9 136 36.8
TPR.G10600 Trifolium pratense HOM05D002647 ORTHO05D002935 5.4e-09 63.9 136 35.3
Actinidia39258 Actinidia chinensis HOM05D002647 ORTHO05D002935 9.3e-09 63.2 136 36.8
CSS0012903 Camellia sinensis var. sinensis HOM05D002647 ORTHO05D002935 1.2e-08 62.8 136 36.0
Ciclev10014921m.g Citrus clementina HOM05D002647 ORTHO05D002935 1.2e-08 62.8 136 36.8
Duzib268G0509 Durio zibethinus HOM05D002647 ORTHO05D002935 1.2e-08 62.8 136 36.0
Glyma.15G117100 Glycine max HOM05D002647 ORTHO05D002935 1.2e-08 62.8 136 36.0
Ca_00747_v3 Cicer arietinum L. HOM05D002647 ORTHO05D002935 1.6e-08 62.4 136 36.0
Lj8A135T98 Lonicera japonica HOM05D002647 ORTHO05D002935 1.6e-08 62.4 136 35.3
ECA234G4506 Erigeron canadensis HOM05D002647 ORTHO05D002935 2.1e-08 62.0 136 35.3
Gohir.D05G307900 Gossypium hirsutum HOM05D002647 ORTHO05D002935 2.1e-08 62.0 136 35.3
Gorai.009G328200 Gossypium raimondii HOM05D002647 ORTHO05D002935 2.1e-08 62.0 136 35.3
VMungo0540G0643 Vigna mungo HOM05D002647 ORTHO05D002935 2.1e-08 62.0 138 36.2
Cpa.g.sc27.249 Carica papaya HOM05D002647 ORTHO05D002935 2.7e-08 61.6 134 35.1
COL.COLO4_06900 Corchorus olitorius HOM05D002647 ORTHO05D002935 2.7e-08 61.6 136 36.0
CANSAT56G2485 Cannabis sativa HOM05D002647 ORTHO05D002935 3.5e-08 61.2 136 36.0
Eucgr.E03886 Eucalyptus grandis HOM05D002647 ORTHO05D002935 3.5e-08 61.2 134 35.1
Rhsim02G0091100 Rhododendron simsii HOM05D002647 ORTHO05D002935 3.5e-08 61.2 136 36.0
arahy.Tifrunner.gnm1.ann1.51NNVX Arachis hypogaea HOM05D002647 ORTHO05D002935 4.6e-08 60.8 136 34.6
CSS0003110 Camellia sinensis var. sinensis HOM05D002647 ORTHO05D002935 4.6e-08 60.8 136 33.1
Ciclev10014755m.g Citrus clementina HOM05D002647 ORTHO05D002935 4.6e-08 60.8 65 53.8
Gohir.A05G307600 Gossypium hirsutum HOM05D002647 ORTHO05D002935 4.6e-08 60.8 136 34.6
Medtr2g026310 Medicago truncatula HOM05D002647 ORTHO05D002935 4.6e-08 60.8 136 36.0
GSVIVG01030076001 Vitis vinifera HOM05D002647 ORTHO05D002935 1.0e-07 59.7 136 34.6
arahy.Tifrunner.gnm1.ann1.DJIM9Q Arachis hypogaea HOM05D002647 ORTHO05D002935 1.3e-07 59.3 136 33.8
AUR62012830 Chenopodium quinoa HOM05D002647 ORTHO05D002935 1.3e-07 59.3 156 32.7
Lsat_1_v5_gn_5_121960 Lactuca sativa HOM05D002647 ORTHO05D002935 1.3e-07 59.3 126 37.3
Thecc.02G308600 Theobroma cacao HOM05D002647 ORTHO05D002935 1.3e-07 59.3 136 34.6
Migut.H01286 Erythranthe guttata HOM05D002647 ORTHO05D002935 1.8e-07 58.9 138 36.2
Nn1g03215 Nelumbo nucifera HOM05D002647 ORTHO05D002935 1.8e-07 58.9 136 36.0
CAN.G805.5 Capsicum annuum HOM05D002647 ORTHO05D002935 3.0e-07 58.2 136 33.8
Cc05_g01040 Coffea canephora HOM05D002647 ORTHO05D002935 3.0e-07 58.2 135 37.0
MSTRG.14096 Avicennia marina HOM05D002647 ORTHO05D002935 3.9e-07 57.8 136 33.8
CSS0031466 Camellia sinensis var. sinensis HOM05D002647 ORTHO05D002935 3.9e-07 57.8 136 32.4
Nitab4.5_0002478g0030 Nicotiana tabacum HOM05D002647 ORTHO05D002935 3.9e-07 57.8 122 36.1
PGR042G1747 Punica granatum HOM05D002647 ORTHO05D002935 3.9e-07 57.8 136 33.8
Cpa.g.sc27.246 Carica papaya HOM05D002647 ORTHO05D002935 5.1e-07 57.4 45 66.7
Nitab4.5_0001701g0100 Nicotiana tabacum HOM05D002647 ORTHO05D002935 6.7e-07 57.0 136 33.8
Nitab4.5_0005267g0010 Nicotiana tabacum HOM05D002647 ORTHO05D002935 6.7e-07 57.0 136 33.8
Atru.chr6.3378 Acer truncatum HOM05D002647 ORTHO05D002935 8.7e-07 56.6 51 58.8
Dinv32706 Davidia involucrata HOM05D002647 ORTHO05D013316 8.7e-07 56.6 41 68.3
Peaxi162Scf00802g00244 Petunia axillaris HOM05D002647 ORTHO05D002935 8.7e-07 56.6 136 33.8
Solyc07g047610.3 Solanum lycopersicum HOM05D002647 ORTHO05D002935 8.7e-07 56.6 136 33.8
Sopen07g024090 Solanum pennellii HOM05D002647 ORTHO05D002935 8.7e-07 56.6 136 33.8
TAR626G1638 Trochodendron aralioides HOM05D002647 ORTHO05D002935 8.7e-07 56.6 136 36.0
HanXRQChr12g0374021 Helianthus annuus HOM05D002647 ORTHO05D002935 1.1e-06 56.2 136 34.6
Ah.09g234030 Amaranthus hybridus HOM05D002647 ORTHO05D002935 1.5e-06 55.8 129 35.7
COL.COLO4_27626 Corchorus olitorius HOM05D002647 ORTHO05D002935 1.5e-06 55.8 136 32.4
Nitab4.5_0008857g0030 Nicotiana tabacum HOM05D002647 ORTHO05D002935 1.5e-06 55.8 122 35.2
MD17G1115800 Malus domestica HOM05D002647 ORTHO05D002935 1.9e-06 55.5 134 32.8
Ah.02g127560 Amaranthus hybridus HOM05D002647 ORTHO05D002935 2.5e-06 55.1 135 34.8
MSTRG.13110 Avicennia marina HOM05D002647 ORTHO05D002935 2.5e-06 55.1 136 36.8
Oeu057032.1 Olea europaea HOM05D002647 ORTHO05D002935 2.5e-06 55.1 136 33.8
Aqoxy4G02248 Aquilegia oxysepala HOM05D002647 ORTHO05D002935 3.3e-06 54.7 50 56.0
Migut.H01622 Erythranthe guttata HOM05D002647 ORTHO05D002935 3.3e-06 54.7 135 36.3
Thhalv10025039m.g Eutrema salsugineum HOM05D002647 ORTHO05D002935 3.3e-06 54.7 134 32.8
Actinidia07873 Actinidia chinensis HOM05D002647 ORTHO05D002935 4.3e-06 54.3 136 32.4
BcaC05g29567 Brassica carinata HOM05D002647 ORTHO05D002935 4.3e-06 54.3 98 39.8
EL10Ac6g14644 Beta vulgaris HOM05D002647 ORTHO05D002935 5.6e-06 53.9 134 34.3
Nn1g07479 Nelumbo nucifera HOM05D002647 ORTHO05D002935 5.6e-06 53.9 136 33.8
TWI53G1694 Tripterygium wilfordii HOM05D002647 ORTHO05D002935 5.6e-06 53.9 121 35.5
TAR627G0651 Trochodendron aralioides HOM05D002647 ORTHO05D002935 5.6e-06 53.9 136 36.8
AL7G38590 Arabidopsis lyrata HOM05D002647 ORTHO05D002935 7.4e-06 53.5 134 32.8
AT4G16420 Arabidopsis thaliana HOM05D002647 ORTHO05D002935 7.4e-06 53.5 134 32.8
PSO302G0263 Papaver somniferum HOM05D002647 ORTHO05D002935 7.4e-06 53.5 42 66.7
Peaxi162Scf00576g00122 Petunia axillaris HOM05D002647 ORTHO05D002935 9.6e-06 53.1 138 32.6
Potri.014G166300 Populus trichocarpa HOM05D002647 ORTHO05D002935 9.6e-06 53.1 136 31.6


User provided reference genes

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