Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p025856 Quercus lobata HOM05D002718 ORTHO05D003269 8.1e-73 276.9 136 100.0
QL12p025880 Quercus lobata HOM05D002718 ORTHO05D003269 7.3e-66 253.8 131 95.4
PGR084G0004 Punica granatum HOM05D002718 ORTHO05D003269 1.2e-55 219.9 125 81.6
PGR142G1783 Punica granatum HOM05D002718 ORTHO05D003269 1.2e-55 219.9 125 81.6
CiPaw.08G021400 Carya illinoinensis HOM05D002718 ORTHO05D003269 1.5e-55 219.5 129 81.4
CANSAT35G0611 Cannabis sativa HOM05D002718 ORTHO05D003269 2.6e-55 218.8 125 81.6
Dinv37495 Davidia involucrata HOM05D002718 ORTHO05D003269 3.4e-55 218.4 125 80.8
Haze_21795 Corylus avellana HOM05D002718 ORTHO05D003269 4.4e-55 218.0 126 81.0
CAN.G480.17 Capsicum annuum HOM05D002718 ORTHO05D003269 5.8e-55 217.6 132 81.1
Solyc08g069231.1 Solanum lycopersicum HOM05D002718 ORTHO05D003269 5.8e-55 217.6 132 80.3
Gohir.A06G107500 Gossypium hirsutum HOM05D002718 ORTHO05D003269 7.6e-55 217.2 125 83.2
Gohir.D06G109800 Gossypium hirsutum HOM05D002718 ORTHO05D003269 7.6e-55 217.2 125 83.2
Gorai.010G124600 Gossypium raimondii HOM05D002718 ORTHO05D003269 7.6e-55 217.2 125 83.2
Peaxi162Scf00213g00943 Petunia axillaris HOM05D002718 ORTHO05D003269 9.9e-55 216.9 132 81.1
TAR383G0086 Trochodendron aralioides HOM05D002718 ORTHO05D003269 1.3e-54 216.5 125 81.6
CANSAT25G2302 Cannabis sativa HOM05D002718 ORTHO05D003269 1.7e-54 216.1 125 80.8
Potri.018G003100 Populus trichocarpa HOM05D002718 ORTHO05D003269 1.7e-54 216.1 125 81.6
COL.COLO4_18626 Corchorus olitorius HOM05D002718 ORTHO05D003269 2.2e-54 215.7 126 83.3
Hma1.2p1_0284F.1_g113850 Hydrangea macrophylla HOM05D002718 ORTHO05D003269 2.2e-54 215.7 128 78.9
Nitab4.5_0000970g0160 Nicotiana tabacum HOM05D002718 ORTHO05D003269 2.9e-54 215.3 132 80.3
Sopen08g022860 Solanum pennellii HOM05D002718 ORTHO05D003269 2.9e-54 215.3 132 79.5
Nn8g41097 Nelumbo nucifera HOM05D002718 ORTHO05D003269 3.8e-54 214.9 130 79.2
Prupe.1G456000 Prunus persica HOM05D002718 ORTHO05D003269 3.8e-54 214.9 127 79.5
TWI32G0829 Tripterygium wilfordii HOM05D002718 ORTHO05D003269 4.9e-54 214.5 128 80.5
Ciclev10007339m.g Citrus clementina HOM05D002718 ORTHO05D003269 6.4e-54 214.2 125 79.2
Duzib168G0110 Durio zibethinus HOM05D002718 ORTHO05D003269 8.4e-54 213.8 125 79.2
Nitab4.5_0001942g0140 Nicotiana tabacum HOM05D002718 ORTHO05D003269 8.4e-54 213.8 132 79.5
Oeu059291.2 Olea europaea HOM05D002718 ORTHO05D003269 8.4e-54 213.8 125 80.0
Rhsim04G0184400 Rhododendron simsii HOM05D002718 ORTHO05D003269 8.4e-54 213.8 125 80.8
Sed0009215 Sechium edule HOM05D002718 ORTHO05D003269 1.1e-53 213.4 125 80.0
Cpa.g.sc148.1 Carica papaya HOM05D002718 ORTHO05D003269 1.4e-53 213.0 125 79.2
SGA_v2.0_scaffold27G11655 Striga asiatica HOM05D002718 ORTHO05D003269 1.4e-53 213.0 125 80.0
MSTRG.11818 Avicennia marina HOM05D002718 ORTHO05D003269 1.9e-53 212.6 125 79.2
Sabra18G0002900 Salix brachista HOM05D002718 ORTHO05D003269 1.9e-53 212.6 125 80.0
Sabra18G0006300 Salix brachista HOM05D002718 ORTHO05D003269 1.9e-53 212.6 125 80.0
Cc11_g03230 Coffea canephora HOM05D002718 ORTHO05D003269 2.4e-53 212.2 125 80.0
Manes.16G137600 Manihot esculenta HOM05D002718 ORTHO05D003269 2.4e-53 212.2 125 80.8
ClCG10G008570 Citrullus lanatus HOM05D002718 ORTHO05D003269 3.2e-53 211.8 123 79.7
CsaV3_4G009070 Cucumis sativus L. HOM05D002718 ORTHO05D003269 3.2e-53 211.8 130 76.9
Lj3C988G10 Lonicera japonica HOM05D002718 ORTHO05D003269 3.2e-53 211.8 129 76.0
EL10Ac2g03697 Beta vulgaris HOM05D002718 ORTHO05D003269 4.2e-53 211.5 128 75.0
Thecc.09G002800 Theobroma cacao HOM05D002718 ORTHO05D003269 4.2e-53 211.5 125 79.2
Nn5g27632 Nelumbo nucifera HOM05D002718 ORTHO05D003269 5.4e-53 211.1 125 79.2
Cfa013311 Carpinus fangiana HOM05D002718 ORTHO05D003269 7.1e-53 210.7 125 80.0
Dinv38809 Davidia involucrata HOM05D002718 ORTHO05D003269 7.1e-53 210.7 125 79.2
ECA246G1707 Erigeron canadensis HOM05D002718 ORTHO05D003269 7.1e-53 210.7 125 78.4
Migut.A00453 Erythranthe guttata HOM05D002718 ORTHO05D003269 7.1e-53 210.7 125 80.0
GSVIVG01035565001 Vitis vinifera HOM05D002718 ORTHO05D003269 7.1e-53 210.7 125 80.0
Actinidia25741 Actinidia chinensis HOM05D002718 ORTHO05D003269 1.2e-52 209.9 131 77.1
MELO3C018969.2 Cucumis melo HOM05D002718 ORTHO05D003269 1.2e-52 209.9 130 75.4
FAN20G1933 Fragaria x ananassa HOM05D002718 ORTHO05D003269 1.2e-52 209.9 134 75.4
MD15G1103100 Malus domestica HOM05D002718 ORTHO05D003269 1.6e-52 209.5 124 79.8
Eucgr.C02132 Eucalyptus grandis HOM05D002718 ORTHO05D003269 2.1e-52 209.1 126 80.2
Psat0s2005g0040 Pisum sativum HOM05D002718 ORTHO05D003269 2.1e-52 209.1 124 79.0
Psat6g034400 Pisum sativum HOM05D002718 ORTHO05D003269 2.1e-52 209.1 124 79.0
PGR142G2777 Punica granatum HOM05D002718 ORTHO05D003269 3.5e-52 208.4 124 75.8
CARHR222420 Cardamine hirsuta HOM05D002718 ORTHO05D003269 4.6e-52 208.0 124 81.5
Cpa.g.sc115.31 Carica papaya HOM05D002718 ORTHO05D003269 4.6e-52 208.0 126 75.4
CSS0012006 Camellia sinensis var. sinensis HOM05D002718 ORTHO05D003269 6.0e-52 207.6 131 75.6
RcHm_v2.0_Chr6g0305421 Rosa chinensis HOM05D002718 ORTHO05D003269 7.8e-52 207.2 131 75.6
TPR.G12004 Trifolium pratense HOM05D002718 ORTHO05D003269 7.8e-52 207.2 124 77.4
vmacro08496 Vaccinium macrocarpon HOM05D002718 ORTHO05D003269 7.8e-52 207.2 125 78.4
AT4G16130 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 1.0e-51 206.8 124 81.5
FvH4_2g36460 Fragaria vesca HOM05D002718 ORTHO05D003269 1.0e-51 206.8 134 74.6
Lj5g0024079 Lotus japonicus HOM05D002718 ORTHO05D003269 1.0e-51 206.8 124 78.2
AL7G39040 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 1.3e-51 206.5 124 80.6
BcaNung00226 Brassica carinata HOM05D002718 ORTHO05D003269 1.3e-51 206.5 124 80.6
Thhalv10024313m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 1.3e-51 206.5 124 80.6
Lj7C754T6 Lonicera japonica HOM05D002718 ORTHO05D003269 1.3e-51 206.5 125 77.6
MD08G1124400 Malus domestica HOM05D002718 ORTHO05D003269 1.3e-51 206.5 124 79.0
Carub.0007s2548 Capsella rubella HOM05D002718 ORTHO05D003269 1.7e-51 206.1 124 80.6
CiPaw.07G209700 Carya illinoinensis HOM05D002718 ORTHO05D003269 2.3e-51 205.7 125 79.2
AUR62020642 Chenopodium quinoa HOM05D002718 ORTHO05D003269 2.3e-51 205.7 128 72.7
HanXRQChr17g0539291 Helianthus annuus HOM05D002718 ORTHO05D003269 2.3e-51 205.7 125 77.6
SalBow4G0158 Salvia bowleyana HOM05D002718 ORTHO05D003269 2.3e-51 205.7 125 76.0
Glyma.17G194400 Glycine max HOM05D002718 ORTHO05D003269 3.0e-51 205.3 136 73.5
Sp7g14590 Schrenkiella parvula HOM05D002718 ORTHO05D003269 3.0e-51 205.3 124 80.6
AUR62038736 Chenopodium quinoa HOM05D002718 ORTHO05D003269 3.9e-51 204.9 126 74.6
A01p21500 Brassica napus HOM05D002718 ORTHO05D003269 5.1e-51 204.5 124 80.6
BraA01t02056Z Brassica rapa HOM05D002718 ORTHO05D003269 5.1e-51 204.5 124 80.6
Lsat_1_v5_gn_3_26460 Lactuca sativa HOM05D002718 ORTHO05D003269 5.1e-51 204.5 127 76.4
Atru.chr7.2686 Acer truncatum HOM05D002718 ORTHO05D003269 6.6e-51 204.1 123 76.4
BcaC09g50300 Brassica carinata HOM05D002718 ORTHO05D003269 6.6e-51 204.1 124 79.8
C01p26840 Brassica napus HOM05D002718 ORTHO05D003269 6.6e-51 204.1 124 79.8
BolC1t02628H Brassica oleracea HOM05D002718 ORTHO05D003269 6.6e-51 204.1 124 79.8
Ca_12844_v3 Cicer arietinum L. HOM05D002718 ORTHO05D003269 1.1e-50 203.4 124 77.4
Glyma.14G138300 Glycine max HOM05D002718 ORTHO05D003269 1.5e-50 203.0 136 72.8
Aa31LG10G6050 Aethionema arabicum HOM05D002718 ORTHO05D003269 1.9e-50 202.6 125 77.6
DCAR_000671 Daucus carota HOM05D002718 ORTHO05D003269 3.3e-50 201.8 129 73.6
VMungo0647G1266 Vigna mungo HOM05D002718 ORTHO05D003269 3.3e-50 201.8 132 73.5
Hund03264 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.3e-50 201.4 123 74.8
THA.LOC104820278 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 4.3e-50 201.4 124 78.2
Phvul.001G077700 Phaseolus vulgaris HOM05D002718 ORTHO05D003269 5.6e-50 201.1 124 75.8
Aqoxy4G00376 Aquilegia oxysepala HOM05D002718 ORTHO05D003269 7.3e-50 200.7 125 74.4
PSO675G7617 Papaver somniferum HOM05D002718 ORTHO05D003269 7.3e-50 200.7 125 72.8
Manes.03G001300 Manihot esculenta HOM05D002718 ORTHO05D003269 9.6e-50 200.3 125 76.0
Medtr1g009190 Medicago truncatula HOM05D002718 ORTHO05D003269 9.6e-50 200.3 132 71.2
MELO3C003601.2 Cucumis melo HOM05D002718 ORTHO05D003269 1.3e-49 199.9 125 75.2
Sc06g0001240 Simmondsia chinensis HOM05D002718 ORTHO05D003269 1.3e-49 199.9 125 77.6
Cc00_g00350 Coffea canephora HOM05D002718 ORTHO05D003269 1.6e-49 199.5 123 74.0
THA.LOC104802597 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 2.1e-49 199.1 125 77.6
FAN27G0986 Fragaria x ananassa HOM05D002718 ORTHO05D003269 2.8e-49 198.7 138 71.7
Lalb_Chr22g0361171 Lupinus albus HOM05D002718 ORTHO05D003269 2.8e-49 198.7 124 75.0
Oeu028830.2 Olea europaea HOM05D002718 ORTHO05D003269 4.8e-49 198.0 136 69.9
THA.LOC104810997 Tarenaya hassleriana HOM05D002718 ORTHO05D003269 4.8e-49 198.0 123 70.7
CsaV3_3G047280 Cucumis sativus L. HOM05D002718 ORTHO05D003269 6.2e-49 197.6 132 72.0
MBI16_g37213_MAGBIO Magnolia biondii HOM05D002718 ORTHO05D003269 6.2e-49 197.6 125 72.8
Nitab4.5_0001535g0040 Nicotiana tabacum HOM05D002718 ORTHO05D003269 6.2e-49 197.6 123 74.0
GSVIVG01032250001 Vitis vinifera HOM05D002718 ORTHO05D003269 6.2e-49 197.6 125 73.6
Potri.018G145700 Populus trichocarpa HOM05D002718 ORTHO05D003269 1.1e-48 196.8 125 72.8
Lalb_Chr08g0243461 Lupinus albus HOM05D002718 ORTHO05D003269 1.4e-48 196.4 128 72.7
Sabra18G0006600 Salix brachista HOM05D002718 ORTHO05D003269 1.4e-48 196.4 157 63.7
MSTRG.25768 Avicennia marina HOM05D002718 ORTHO05D003269 1.8e-48 196.1 124 76.6
SHI02366 Sapria himalayana HOM05D002718 ORTHO05D003269 3.1e-48 195.3 123 75.6
HPP92_017382 Vanilla planifolia HOM05D002718 ORTHO05D003269 4.0e-48 194.9 125 70.4
PSO170G4524 Papaver somniferum HOM05D002718 ORTHO05D003269 9.0e-48 193.7 125 71.2
Sabra18G0127600 Salix brachista HOM05D002718 ORTHO05D003269 1.2e-47 193.4 125 71.2
ATR0626G149 Amborella trichopoda HOM05D002718 ORTHO05D003269 2.0e-47 192.6 125 72.0
CAN.G600.5 Capsicum annuum HOM05D002718 ORTHO05D003269 3.4e-47 191.8 128 68.0
SEGI_21242 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 3.4e-47 191.8 127 72.4
BcaC04g20159 Brassica carinata HOM05D002718 ORTHO05D003269 5.8e-47 191.0 123 71.5
DCAR_004565 Daucus carota HOM05D002718 ORTHO05D003269 5.8e-47 191.0 141 67.4
Os06g0702500 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 5.8e-47 191.0 127 68.5
Sabra18G0120000 Salix brachista HOM05D002718 ORTHO05D003269 5.8e-47 191.0 125 70.4
BcaB08g35974 Brassica carinata HOM05D002718 ORTHO05D003269 1.7e-46 189.5 123 70.7
Sabra18G0009800 Salix brachista HOM05D002718 ORTHO05D003269 1.7e-46 189.5 173 57.2
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 2.9e-46 188.7 125 72.0
Os02g0141300 Oryza sativa ssp. japonica HOM05D002718 ORTHO05D003269 2.9e-46 188.7 125 69.6
unitig_748.g8176 Utricularia gibba HOM05D002718 ORTHO05D003269 2.9e-46 188.7 122 74.6
Thhalv10012582m.g Eutrema salsugineum HOM05D002718 ORTHO05D003269 4.9e-46 188.0 123 69.9
PGSC0003DMG400009774 Solanum tuberosum HOM05D002718 ORTHO05D003269 4.9e-46 188.0 123 69.9
MSTRG.10465 Avicennia marina HOM05D002718 ORTHO05D003269 6.4e-46 187.6 123 69.1
Carub.0005s0889 Capsella rubella HOM05D002718 ORTHO05D003269 6.4e-46 187.6 123 69.1
BraA10t43426Z Brassica rapa HOM05D002718 ORTHO05D003269 1.1e-45 186.8 124 71.0
SEGI_37495 Sequoiadendron giganteum HOM05D002718 ORTHO05D003269 1.1e-45 186.8 126 70.6
BolC9t57573H Brassica oleracea HOM05D002718 ORTHO05D003269 1.4e-45 186.4 124 71.0
Peaxi162Scf00320g00216 Petunia axillaris HOM05D002718 ORTHO05D003269 1.4e-45 186.4 123 68.3
PSO675G1851 Papaver somniferum HOM05D002718 ORTHO05D003269 1.9e-45 186.0 125 69.6
Sp6g17930 Schrenkiella parvula HOM05D002718 ORTHO05D003269 1.9e-45 186.0 123 69.1
Sopen00g003670 Solanum pennellii HOM05D002718 ORTHO05D003269 5.4e-45 184.5 123 68.3
Sopen07g005900 Solanum pennellii HOM05D002718 ORTHO05D003269 5.4e-45 184.5 123 68.3
Nitab4.5_0000899g0120 Nicotiana tabacum HOM05D002718 ORTHO05D003269 1.2e-44 183.3 123 69.1
SalBow5G2825 Salvia bowleyana HOM05D002718 ORTHO05D003269 1.6e-44 183.0 123 69.9
SalBow5G3535 Salvia bowleyana HOM05D002718 ORTHO05D003269 1.6e-44 183.0 123 69.9
Zm00001eb227090 Zea mays HOM05D002718 ORTHO05D003269 3.5e-44 181.8 125 68.0
Solyc07g016170.4 Solanum lycopersicum HOM05D002718 ORTHO05D003269 7.9e-44 180.6 123 66.7
AT3G42850 Arabidopsis thaliana HOM05D002718 ORTHO05D003269 1.0e-43 180.3 123 67.5
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 1.3e-43 179.9 127 65.4
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 3.9e-43 178.3 117 70.1
Lsat_1_v5_gn_5_56521 Lactuca sativa HOM05D002718 ORTHO05D003269 3.9e-43 178.3 133 65.4
C08p28790 Brassica napus HOM05D002718 ORTHO05D003269 5.1e-43 177.9 123 68.3
AL5G21150 Arabidopsis lyrata HOM05D002718 ORTHO05D003269 6.7e-43 177.6 123 66.7
arahy.Tifrunner.gnm1.ann1.NA6C8E Arachis hypogaea HOM05D002718 ORTHO05D003269 1.2e-39 166.8 100 75.0
arahy.Tifrunner.gnm1.ann1.YWBJ1A Arachis hypogaea HOM05D002718 ORTHO05D003269 1.2e-39 166.8 100 75.0
C01p28220 Brassica napus HOM05D002718 ORTHO05D003269 1.5e-39 166.4 123 65.9
CARHR153810 Cardamine hirsuta HOM05D002718 ORTHO05D003269 1.1e-37 160.2 115 65.2
AagrBONN_evm.TU.Sc2ySwM_117.407 Anthoceros agrestis HOM05D002718 ORTHO05D003269 9.3e-37 157.1 123 60.2
Mapoly0043s0024 Marchantia polymorpha HOM05D002718 ORTHO05D003269 1.3e-33 146.7 126 56.3
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 1.1e-32 143.7 92 71.7
SMO146G0086 Selaginella moellendorffii HOM05D002718 ORTHO05D003269 2.4e-32 142.5 124 57.3
CBR_g29486 Chara braunii HOM05D002718 ORTHO05D003269 3.1e-32 142.1 126 51.6
Pp3c6_8620 Physcomitrium patens HOM05D002718 ORTHO05D003269 9.0e-32 140.6 126 54.8
Pp3c16_4920 Physcomitrium patens HOM05D002718 ORTHO05D003269 4.9e-30 134.8 125 52.0
PGSC0003DMG401029558 Solanum tuberosum HOM05D002718 ORTHO05D003269 7.1e-29 131.0 84 76.2
PRCOL_00002758 Prasinoderma coloniale HOM05D002718 ORTHO05D003269 1.1e-26 123.6 125 49.6
unitig_32.g11648 Utricularia gibba HOM05D002718 ORTHO05D003269 2.8e-25 119.0 108 58.3
ClCG05G026320 Citrullus lanatus HOM05D002718 ORTHO05D003269 1.1e-24 117.1 76 67.1
BcaB04g18359 Brassica carinata HOM05D002718 ORTHO05D003269 2.6e-23 112.5 77 71.4
Potri.018G138202 Populus trichocarpa HOM05D002718 ORTHO05D003269 1.3e-22 110.2 107 55.1
A08p12450 Brassica napus HOM05D002718 ORTHO05D021965 5.0e-22 108.2 72 76.4
BraA08t33211Z Brassica rapa HOM05D002718 ORTHO05D021965 5.0e-22 108.2 72 76.4
Cre03.g185300 Chlamydomonas reinhardtii HOM05D002718 ORTHO05D003269 5.1e-19 98.2 130 41.5
MCO10G390 Micromonas commoda HOM05D002718 ORTHO05D003269 3.1e-16 89.0 120 38.3
PSO675G2070 Papaver somniferum HOM05D002718 ORTHO05D021965 1.2e-15 87.0 65 63.1
arahy.Tifrunner.gnm1.ann1.JKU0Z0 Arachis hypogaea HOM05D000572 ORTHO05D083655 1.8e-11 73.2 54 64.8
BolC8t48332H Brassica oleracea HOM05D002718 ORTHO05D021965 5.1e-11 71.6 50 72.0
BcaC07g37950 Brassica carinata HOM05D049696 ORTHO05D021965 8.8e-11 70.9 44 72.7
arahy.Tifrunner.gnm1.ann1.W8I5D1 Arachis hypogaea HOM05D003313 ORTHO05D004217 3.3e-10 68.9 46 65.2
Psat0s4805g0160 Pisum sativum HOM05D002718 ORTHO05D003269 9.1e-08 60.8 45 64.4
arahy.Tifrunner.gnm1.ann1.UGM12E Arachis hypogaea HOM05D003313 ORTHO05D004217 1.0e-06 57.4 45 55.6


User provided reference genes

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