Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p013194 Quercus lobata HOM05D003810 ORTHO05D004416 1.8e-93 345.9 171 100.0
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 1.0e-48 197.2 182 60.4
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 9.6e-39 164.1 206 50.5
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.6e-38 163.3 181 54.1
CiPaw.14G066900 Carya illinoinensis HOM05D003810 ORTHO05D004416 8.1e-38 161.0 183 52.5
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 5.3e-37 158.3 183 51.9
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 1.4e-34 150.2 187 47.6
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 3.5e-33 145.6 198 47.0
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 6.0e-33 144.8 187 50.8
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 5.1e-32 141.7 181 47.5
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 6.6e-32 141.4 187 47.6
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.1e-31 140.6 197 47.2
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 1.1e-31 140.6 197 47.2
Duzib168G0397 Durio zibethinus HOM05D003810 ORTHO05D004416 1.5e-31 140.2 197 45.2
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 5.6e-31 138.3 183 47.0
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 7.3e-31 137.9 183 44.8
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 1.6e-30 136.7 197 45.2
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.1e-30 136.3 183 44.8
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 3.6e-30 135.6 183 45.9
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 3.6e-30 135.6 183 44.8
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 3.6e-30 135.6 183 44.8
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 3.6e-30 135.6 181 45.3
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 4.8e-30 135.2 183 44.8
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.1e-29 134.0 183 44.8
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 2.4e-29 132.9 181 45.3
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 2.4e-29 132.9 183 44.8
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 4.0e-29 132.1 183 45.9
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 6.9e-29 131.3 187 46.0
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 1.2e-28 130.6 187 46.0
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 2.0e-28 129.8 210 41.4
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 2.0e-28 129.8 183 43.2
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 2.6e-28 129.4 183 43.7
Lalb_Chr06g0169751 Lupinus albus HOM05D003810 ORTHO05D004416 5.8e-28 128.3 184 40.8
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 7.6e-28 127.9 185 44.3
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 7.6e-28 127.9 184 43.5
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 1.7e-27 126.7 183 42.1
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 1.7e-27 126.7 184 42.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 2.2e-27 126.3 182 41.2
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 2.9e-27 125.9 187 42.8
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 6.4e-27 124.8 182 44.5
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.4e-27 124.8 168 45.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.4e-26 123.6 185 44.3
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 1.4e-26 123.6 200 41.5
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 7.1e-26 121.3 187 43.3
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 9.3e-26 120.9 101 62.4
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 9.3e-26 120.9 103 62.1
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.2e-25 120.6 189 38.6
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 1.2e-25 120.6 184 44.0
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 1.2e-25 120.6 211 38.4
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.2e-25 120.6 187 39.6
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.6e-25 120.2 183 42.1
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.1e-25 119.8 187 42.8
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 3.5e-25 119.0 187 42.2
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 3.5e-25 119.0 187 39.0
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 6.0e-25 118.2 187 42.2
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 6.0e-25 118.2 189 38.1
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 6.0e-25 118.2 187 42.2
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.8e-24 116.7 186 42.5
FAN09G2262 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.8e-24 116.7 182 41.2
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.9e-24 115.5 103 60.2
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.9e-24 115.5 103 60.2
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 5.1e-24 115.2 197 43.7
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 5.1e-24 115.2 187 42.2
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 5.1e-24 115.2 187 42.2
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 6.7e-24 114.8 192 40.1
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 1.1e-23 114.0 210 36.7
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.1e-23 114.0 187 42.8
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.9e-23 113.2 194 39.2
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 4.3e-23 112.1 187 40.1
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 4.3e-23 112.1 187 40.6
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 5.6e-23 111.7 189 39.2
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 5.6e-23 111.7 193 40.9
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 5.6e-23 111.7 191 40.3
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 9.6e-23 110.9 183 39.9
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 1.3e-22 110.5 202 37.1
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 1.6e-22 110.2 182 41.2
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 1.1e-21 107.5 181 38.1
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 4.0e-21 105.5 185 42.2
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 4.0e-21 105.5 183 38.8
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 5.3e-21 105.1 187 35.8
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 6.9e-21 104.8 185 42.2
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 6.9e-21 104.8 185 42.2
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 6.9e-21 104.8 185 42.2
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.5e-20 103.6 176 42.0
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 1.5e-20 103.6 185 41.6
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 1.5e-20 103.6 184 38.0
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 2.6e-20 102.8 187 40.6
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 4.5e-20 102.1 186 40.9
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 4.5e-20 102.1 102 52.0
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 5.8e-20 101.7 201 38.3
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 5.8e-20 101.7 187 39.0
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 5.8e-20 101.7 185 38.4
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 7.6e-20 101.3 189 37.0
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 7.6e-20 101.3 190 35.3
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 7.6e-20 101.3 177 37.3
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 7.6e-20 101.3 184 39.1
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 1.0e-19 100.9 186 40.9
Lj3g0026478 Lotus japonicus HOM05D003810 ORTHO05D004416 1.0e-19 100.9 169 41.4
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-19 100.5 189 36.0
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 2.2e-19 99.8 184 39.1
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 2.2e-19 99.8 186 40.3
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 4.9e-19 98.6 162 40.7
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 6.5e-19 98.2 186 35.5
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.5e-19 98.2 190 37.4
Gohir.A07G114432 Gossypium hirsutum HOM05D003810 ORTHO05D004416 6.5e-19 98.2 91 57.1
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 1.1e-18 97.4 103 53.4
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 1.1e-18 97.4 202 36.6
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 1.4e-18 97.1 204 37.3
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 2.5e-18 96.3 186 39.2
CARHR219980 Cardamine hirsuta HOM05D003810 ORTHO05D004416 3.2e-18 95.9 174 40.8
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 5.5e-18 95.1 186 38.7
MD08G1246400 Malus domestica HOM05D003810 ORTHO05D004416 1.6e-17 93.6 83 54.2
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 2.1e-17 93.2 184 39.7
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 2.7e-17 92.8 187 39.6
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 4.6e-17 92.0 191 34.6
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 6.0e-17 91.7 122 44.3
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 6.0e-17 91.7 188 38.3
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.0e-16 90.9 187 38.0
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.3e-16 90.5 113 47.8
Potri.005G061366 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.3e-16 89.7 83 59.0
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 3.3e-15 85.9 187 35.3
BolC6t35297H Brassica oleracea HOM05D003810 ORTHO05D004416 4.8e-14 82.0 178 36.5
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 8.2e-14 81.3 174 36.8
RcHm_v2.0_Chr2g0090241 Rosa chinensis HOM05D003810 ORTHO05D004416 1.8e-13 80.1 178 35.4
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 1.5e-12 77.0 125 43.2
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 1.5e-12 77.0 109 46.8
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 5.8e-12 75.1 175 33.1
Lj1A897G42 Lonicera japonica HOM05D003810 ORTHO05D004416 7.6e-12 74.7 63 60.3
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 1.1e-10 70.9 125 38.4
ECA233G1945 Erigeron canadensis HOM05D000449 ORTHO05D003939 1.6e-09 67.0 125 40.0
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 3.5e-09 65.9 163 34.4
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 1.3e-08 63.9 144 34.7
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 2.3e-08 63.2 185 30.8
TAR627G1127 Trochodendron aralioides HOM05D003810 ORTHO05D004416 2.5e-07 59.7 49 57.1
TPR.G30194 Trifolium pratense HOM05D003810 ORTHO05D004416 4.8e-06 55.5 49 59.2


User provided reference genes

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