Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p041511 Quercus lobata HOM05D004755 ORTHO05D006137 6.7e-39 163.7 92 100.0
QL07p047567 Quercus lobata HOM05D004755 ORTHO05D006137 4.1e-36 154.5 90 96.7
QL11p042321 Quercus lobata HOM05D004755 ORTHO05D006137 1.2e-35 152.9 90 95.6
QL11p041742 Quercus lobata HOM05D004755 ORTHO05D006137 2.6e-35 151.8 92 94.6
QL11p041806 Quercus lobata HOM05D004755 ORTHO05D006137 7.7e-35 150.2 91 93.4
Cfa004975 Carpinus fangiana HOM05D004755 ORTHO05D006137 6.1e-32 140.6 90 87.8
Haze_02419 Corylus avellana HOM05D004755 ORTHO05D006137 6.1e-32 140.6 90 87.8
Potri.004G150700 Populus trichocarpa HOM05D004755 ORTHO05D006137 2.3e-31 138.7 89 85.4
Prupe.8G104600 Prunus persica HOM05D004755 ORTHO05D006137 4.0e-31 137.9 90 84.4
Lj5A201G28 Lonicera japonica HOM05D004755 ORTHO05D006137 5.7e-30 134.0 90 82.2
Phvul.011G047700 Phaseolus vulgaris HOM05D004755 ORTHO05D006137 9.7e-30 133.3 90 82.2
Sabra04G0100200 Salix brachista HOM05D004755 ORTHO05D006137 9.7e-30 133.3 88 83.0
Actinidia00497 Actinidia chinensis HOM05D004755 ORTHO05D006137 1.7e-29 132.5 90 81.1
CSS0003833 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 2.2e-29 132.1 90 82.2
CSS0019785 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D006137 2.2e-29 132.1 90 82.2
DCAR_022097 Daucus carota HOM05D004755 ORTHO05D006137 3.7e-29 131.3 90 78.9
Potri.009G112184 Populus trichocarpa HOM05D004755 ORTHO05D006137 3.7e-29 131.3 89 79.8
Thecc.02G121800 Theobroma cacao HOM05D004755 ORTHO05D006137 3.7e-29 131.3 89 79.8
Potri.T125104 Populus trichocarpa HOM05D004755 ORTHO05D006137 6.3e-29 130.6 89 78.7
CiPaw.05G060900 Carya illinoinensis HOM05D004755 ORTHO05D006137 1.1e-28 129.8 90 76.7
TWI75G0180 Tripterygium wilfordii HOM05D004755 ORTHO05D006137 1.1e-28 129.8 90 78.9
Gohir.D04G159300 Gossypium hirsutum HOM05D004755 ORTHO05D006137 1.4e-28 129.4 90 76.7
Rhsim11G0173300 Rhododendron simsii HOM05D004755 ORTHO05D006137 1.8e-28 129.0 89 79.8
VMungo1127G1904 Vigna mungo HOM05D004755 ORTHO05D006137 1.8e-28 129.0 90 80.0
Glyma.12G045800 Glycine max HOM05D004755 ORTHO05D006137 2.4e-28 128.6 90 80.0
Gohir.A04G117600 Gossypium hirsutum HOM05D004755 ORTHO05D006137 2.4e-28 128.6 90 76.7
Lj3g0013592 Lotus japonicus HOM05D004755 ORTHO05D006137 2.4e-28 128.6 88 80.7
Nitab4.5_0004287g0030 Nicotiana tabacum HOM05D004755 ORTHO05D006137 2.4e-28 128.6 90 76.7
RcHm_v2.0_Chr6g0262551 Rosa chinensis HOM05D004755 ORTHO05D006137 2.4e-28 128.6 90 77.8
Sabra09G0085600 Salix brachista HOM05D004755 ORTHO05D006137 2.4e-28 128.6 89 77.5
vmacro02143 Vaccinium macrocarpon HOM05D004755 ORTHO05D006137 2.4e-28 128.6 90 77.8
CAN.G322.107 Capsicum annuum HOM05D004755 ORTHO05D006137 3.1e-28 128.3 90 77.8
FAN15G3513 Fragaria x ananassa HOM05D004755 ORTHO05D006137 3.1e-28 128.3 90 76.7
Glyma.01G127800 Glycine max HOM05D004755 ORTHO05D006137 3.1e-28 128.3 89 80.9
Manes.17G099000 Manihot esculenta HOM05D004755 ORTHO05D006137 3.1e-28 128.3 89 80.9
Atru.chr5.2935 Acer truncatum HOM05D004755 ORTHO05D006137 5.3e-28 127.5 90 77.8
Oeu010560.1 Olea europaea HOM05D004755 ORTHO05D006137 5.3e-28 127.5 90 76.7
Peaxi162Scf00016g01034 Petunia axillaris HOM05D004755 ORTHO05D006137 5.3e-28 127.5 90 75.6
Gorai.012G146700 Gossypium raimondii HOM05D004755 ORTHO05D006137 7.0e-28 127.1 90 75.6
Eucgr.I01243 Eucalyptus grandis HOM05D004755 ORTHO05D006137 9.1e-28 126.7 90 76.7
Cpa.g.sc62.108 Carica papaya HOM05D004755 ORTHO05D006137 1.2e-27 126.3 90 76.7
MD10G1082200 Malus domestica HOM05D004755 ORTHO05D006137 1.2e-27 126.3 88 78.4
CARHR094310 Cardamine hirsuta HOM05D004755 ORTHO05D006137 1.6e-27 125.9 89 77.5
Duzib132G0528 Durio zibethinus HOM05D004755 ORTHO05D006137 1.6e-27 125.9 90 75.6
FAN20G2502 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.6e-27 125.9 90 75.6
FAN24G1877 Fragaria x ananassa HOM05D004755 ORTHO05D006137 1.6e-27 125.9 90 76.7
Hund06220 Selenicereus undatus HOM05D004755 ORTHO05D006137 1.6e-27 125.9 89 78.7
Ciclev10027868m.g Citrus clementina HOM05D004755 ORTHO05D006137 2.0e-27 125.6 90 76.7
arahy.Tifrunner.gnm1.ann1.CRQ4KQ Arachis hypogaea HOM05D004755 ORTHO05D006137 2.7e-27 125.2 90 76.7
AT3G18860 Arabidopsis thaliana HOM05D004755 ORTHO05D006137 3.5e-27 124.8 89 76.4
COL.COLO4_32463 Corchorus olitorius HOM05D004755 ORTHO05D006137 3.5e-27 124.8 90 74.4
Thhalv10020129m.g Eutrema salsugineum HOM05D004755 ORTHO05D006137 3.5e-27 124.8 89 77.5
Hma1.2p1_0066F.1_g036770 Hydrangea macrophylla HOM05D004755 ORTHO05D006137 3.5e-27 124.8 89 76.4
FvH4_2g08030 Fragaria vesca HOM05D004755 ORTHO05D006137 4.5e-27 124.4 90 75.6
Thecc.09G060700 Theobroma cacao HOM05D004755 ORTHO05D006137 4.5e-27 124.4 89 75.3
Lalb_Chr01g0002741 Lupinus albus HOM05D004755 ORTHO05D006137 5.9e-27 124.0 90 78.9
EL10Ac9g21762 Beta vulgaris HOM05D004755 ORTHO05D006137 7.7e-27 123.6 90 75.6
AUR62011360 Chenopodium quinoa HOM05D004755 ORTHO05D006137 7.7e-27 123.6 90 74.4
Medtr4g069090 Medicago truncatula HOM05D004755 ORTHO05D006137 7.7e-27 123.6 90 76.7
TPR.G18928 Trifolium pratense HOM05D004755 ORTHO05D006137 7.7e-27 123.6 89 77.5
Psat7g185120 Pisum sativum HOM05D004755 ORTHO05D006137 1.0e-26 123.2 90 76.7
Ca_20846_v3 Cicer arietinum L. HOM05D004755 ORTHO05D006137 1.3e-26 122.9 90 75.6
Lalb_Chr03g0025821 Lupinus albus HOM05D004755 ORTHO05D006137 1.3e-26 122.9 90 76.7
arahy.Tifrunner.gnm1.ann1.A0G0F1 Arachis hypogaea HOM05D004755 ORTHO05D006137 1.7e-26 122.5 90 75.6
Glyma.11G120700 Glycine max HOM05D004755 ORTHO05D006137 1.7e-26 122.5 89 76.4
Solyc01g109350.3 Solanum lycopersicum HOM05D004755 ORTHO05D006137 1.7e-26 122.5 90 73.3
Aqoxy5G01708 Aquilegia oxysepala HOM05D004755 ORTHO05D006137 2.2e-26 122.1 88 73.9
Nn5g29490 Nelumbo nucifera HOM05D004755 ORTHO05D006137 2.2e-26 122.1 90 73.3
PGR142G0564 Punica granatum HOM05D004755 ORTHO05D006137 2.2e-26 122.1 89 77.5
Aa31LG8G5700 Aethionema arabicum HOM05D004755 ORTHO05D006137 2.9e-26 121.7 89 75.3
GSVIVG01031913001 Vitis vinifera HOM05D004755 ORTHO05D006137 2.9e-26 121.7 90 74.4
AL3G32250 Arabidopsis lyrata HOM05D004755 ORTHO05D006137 3.8e-26 121.3 89 74.2
BcaC01g03670 Brassica carinata HOM05D004755 ORTHO05D006137 3.8e-26 121.3 89 74.2
C03p49850 Brassica napus HOM05D004755 ORTHO05D006137 3.8e-26 121.3 89 74.2
BolC3t17278H Brassica oleracea HOM05D004755 ORTHO05D006137 3.8e-26 121.3 89 74.2
C05p46570 Brassica napus HOM05D004755 ORTHO05D006137 5.0e-26 120.9 89 74.2
BraA05t21911Z Brassica rapa HOM05D004755 ORTHO05D006137 5.0e-26 120.9 89 74.2
AUR62016701 Chenopodium quinoa HOM05D004755 ORTHO05D006137 5.0e-26 120.9 90 72.2
Sopen01g051540 Solanum pennellii HOM05D004755 ORTHO05D006137 5.0e-26 120.9 90 72.2
A03p40880 Brassica napus HOM05D004755 ORTHO05D006137 6.5e-26 120.6 89 73.0
BraA03t13246Z Brassica rapa HOM05D004755 ORTHO05D006137 6.5e-26 120.6 89 73.0
Sp3g16960 Schrenkiella parvula HOM05D004755 ORTHO05D006137 6.5e-26 120.6 89 74.2
Cc02_g17900 Coffea canephora HOM05D004755 ORTHO05D006137 8.5e-26 120.2 92 71.7
BcaNung06950 Brassica carinata HOM05D004755 ORTHO05D006137 1.5e-25 119.4 89 73.0
A05p30690 Brassica napus HOM05D004755 ORTHO05D006137 1.5e-25 119.4 89 73.0
BolC5t33386H Brassica oleracea HOM05D004755 ORTHO05D006137 1.5e-25 119.4 89 73.0
Migut.B00268 Erythranthe guttata HOM05D004755 ORTHO05D006137 1.5e-25 119.4 90 71.1
Carub.0003s1870 Capsella rubella HOM05D004755 ORTHO05D006137 2.5e-25 118.6 89 73.0
THA.LOC104798811 Tarenaya hassleriana HOM05D004755 ORTHO05D006137 2.5e-25 118.6 89 74.2
BcaB06g25940 Brassica carinata HOM05D004755 ORTHO05D006137 4.2e-25 117.9 89 71.9
MBI16_g13149_MAGBIO Magnolia biondii HOM05D004755 ORTHO05D006137 5.5e-25 117.5 88 75.0
ECA240G4701 Erigeron canadensis HOM05D004755 ORTHO05D006137 7.2e-25 117.1 89 71.9
ClCG02G005310 Citrullus lanatus HOM05D004755 ORTHO05D006137 4.7e-24 114.4 91 70.3
Sed0014712 Sechium edule HOM05D004755 ORTHO05D006137 4.7e-24 114.4 91 71.4
Sc18g0004710 Simmondsia chinensis HOM05D004755 ORTHO05D006137 4.7e-24 114.4 88 71.6
Lsat_1_v5_gn_9_109321 Lactuca sativa HOM05D004755 ORTHO05D006137 8.0e-24 113.6 88 69.3
SalBow6G2421 Salvia bowleyana HOM05D004755 ORTHO05D006137 8.0e-24 113.6 90 73.3
CsaV3_7G010210 Cucumis sativus L. HOM05D004755 ORTHO05D006137 2.3e-23 112.1 91 69.2
PSO170G5490 Papaver somniferum HOM05D004755 ORTHO05D006137 6.8e-23 110.5 87 73.6
PSO700G0113 Papaver somniferum HOM05D004755 ORTHO05D006137 6.8e-23 110.5 87 73.6
MELO3C018404.2 Cucumis melo HOM05D004755 ORTHO05D006137 8.8e-23 110.2 91 68.1
Ah.01g006160 Amaranthus hybridus HOM05D004755 ORTHO05D006137 2.6e-22 108.6 88 69.3
Os07g0123700 Oryza sativa ssp. japonica HOM05D004755 ORTHO05D006137 3.4e-22 108.2 88 65.9
Nitab4.5_0004280g0140 Nicotiana tabacum HOM05D004755 ORTHO05D006137 5.7e-22 107.5 78 74.4
unitig_746.g26712 Utricularia gibba HOM05D004755 ORTHO05D006137 9.8e-22 106.7 86 66.3
HPP92_001848 Vanilla planifolia HOM05D004755 ORTHO05D006137 2.2e-21 105.5 86 69.8
SGA_v2.0_scaffold58G20570 Striga asiatica HOM05D004755 ORTHO05D006137 2.2e-18 95.5 114 54.4
ATR0733G059 Amborella trichopoda HOM05D004755 ORTHO05D006137 4.2e-17 91.3 87 58.6
SEGI_11122 Sequoiadendron giganteum HOM05D004755 ORTHO05D006137 4.2e-17 91.3 87 58.6
PGSC0003DMG400025184 Solanum tuberosum HOM05D004755 ORTHO05D006137 9.5e-17 90.1 68 70.6
Mapoly0131s0025 Marchantia polymorpha HOM05D004755 ORTHO05D006137 1.8e-12 75.9 89 46.1
TAR628G0908 Trochodendron aralioides HOM05D004755 ORTHO05D006137 2.0e-11 72.4 51 76.5
Pp3c13_21390 Physcomitrium patens HOM05D004755 ORTHO05D006137 5.9e-11 70.9 88 45.5
Lsat_1_v5_gn_3_56800 Lactuca sativa HOM05D004755 ORTHO05D006137 2.3e-10 68.9 46 80.4
HanXRQChr08g0216571 Helianthus annuus HOM05D004755 ORTHO05D006137 8.6e-10 67.0 54 70.4
Haze_01851 Corylus avellana HOM05D004755 ORTHO05D006137 3.3e-09 65.1 44 79.5
SMO146G0209 Selaginella moellendorffii HOM05D004755 ORTHO05D006137 4.3e-09 64.7 88 43.2
Lsat_1_v5_gn_3_67820 Lactuca sativa HOM05D001195 ORTHO05D001138 7.3e-09 63.9 46 76.1


User provided reference genes

Program Settings