Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL10p043044 Quercus lobata HOM05D001473 ORTHO05D003934 5.2e-201 704.1 348 100.0
Manes.08G139000 Manihot esculenta HOM05D001473 ORTHO05D003934 5.2e-132 474.9 456 60.1
Eucgr.B01570 Eucalyptus grandis HOM05D001473 ORTHO05D003934 1.7e-130 469.9 471 57.7
Manes.09G148400 Manihot esculenta HOM05D001473 ORTHO05D003934 3.7e-130 468.8 456 59.9
Potri.013G046300 Populus trichocarpa HOM05D001473 ORTHO05D003934 4.8e-130 468.4 459 58.6
MELO3C017522.2 Cucumis melo HOM05D001473 ORTHO05D003934 8.2e-130 467.6 461 58.6
Cfa002922 Carpinus fangiana HOM05D001473 ORTHO05D003934 1.1e-129 467.2 454 60.4
ClCG06G009620 Citrullus lanatus HOM05D001473 ORTHO05D003934 1.8e-129 466.5 461 58.4
Sabra19G0028000 Salix brachista HOM05D001473 ORTHO05D003934 1.8e-129 466.5 458 58.3
Potri.019G018400 Populus trichocarpa HOM05D001473 ORTHO05D003934 5.3e-129 464.9 458 58.3
CsaV3_7G031760 Cucumis sativus L. HOM05D004228 ORTHO05D003934 7.0e-129 464.5 461 58.4
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 1.2e-128 463.8 458 57.9
Thecc.05G271600 Theobroma cacao HOM05D001473 ORTHO05D003934 1.2e-128 463.8 461 58.1
Sed0003092 Sechium edule HOM05D001473 ORTHO05D003934 2.7e-128 462.6 461 57.9
Gohir.A13G167900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 3.5e-128 462.2 461 58.6
CiPaw.04G081100 Carya illinoinensis HOM05D001473 ORTHO05D003934 4.5e-128 461.8 460 58.5
Gorai.013G187200 Gossypium raimondii HOM05D001473 ORTHO05D003934 4.5e-128 461.8 461 58.4
CANSAT54G0715 Cannabis sativa HOM05D001473 ORTHO05D003934 5.9e-128 461.5 461 57.9
Dinv05754 Davidia involucrata HOM05D001473 ORTHO05D003934 7.7e-128 461.1 457 58.6
PGR031G3359 Punica granatum HOM05D001473 ORTHO05D003934 7.7e-128 461.1 460 57.8
Gohir.D13G173300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.0e-127 460.7 461 58.4
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.3e-127 460.3 456 59.0
Glyma.10G165900 Glycine max HOM05D001473 ORTHO05D003934 2.2e-127 459.5 457 58.2
TWI79G0745 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 2.2e-127 459.5 466 57.9
CSS0041231 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 3.8e-127 458.8 463 58.3
Duzib106G1036 Durio zibethinus HOM05D001473 ORTHO05D003934 8.5e-127 457.6 460 58.0
Duzib128G0032 Durio zibethinus HOM05D001473 ORTHO05D003934 8.5e-127 457.6 461 58.1
Cpa.g.sc306.1 Carica papaya HOM05D001473 ORTHO05D003934 1.1e-126 457.2 461 58.4
Prupe.6G349400 Prunus persica HOM05D001473 ORTHO05D003934 1.1e-126 457.2 442 59.3
Rhsim05G0175000 Rhododendron simsii HOM05D001473 ORTHO05D003934 3.2e-126 455.7 461 57.9
Phvul.L001860 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 5.5e-126 454.9 459 57.5
Glyma.20G223300 Glycine max HOM05D001473 ORTHO05D003934 9.4e-126 454.1 450 58.2
QL03p030821 Quercus lobata HOM05D001473 ORTHO05D003934 9.4e-126 454.1 451 59.4
RcHm_v2.0_Chr3g0449801 Rosa chinensis HOM05D001473 ORTHO05D003934 1.2e-125 453.8 449 59.0
Hund07267 Selenicereus undatus HOM05D001473 ORTHO05D003934 6.1e-125 451.4 461 56.6
Dinv18449 Davidia involucrata HOM05D001473 ORTHO05D003934 1.0e-124 450.7 452 58.0
ATR0736G172 Amborella trichopoda HOM05D001473 ORTHO05D003934 1.8e-124 449.9 461 56.6
MD04G1229500 Malus domestica HOM05D001473 ORTHO05D003934 1.8e-124 449.9 448 58.5
Duzib177G0283 Durio zibethinus HOM05D001473 ORTHO05D003934 2.3e-124 449.5 461 57.3
MD12G1246400 Malus domestica HOM05D001473 ORTHO05D003934 4.0e-124 448.7 446 58.5
TWI31G0266 Tripterygium wilfordii HOM05D001473 ORTHO05D003934 4.0e-124 448.7 450 58.4
CSS0044349 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 6.8e-124 448.0 457 57.1
FAN14G3813 Fragaria x ananassa HOM05D001473 ORTHO05D003934 6.8e-124 448.0 454 58.4
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 8.8e-124 447.6 446 58.7
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 8.8e-124 447.6 446 58.7
Ciclev10018691m.g Citrus clementina HOM05D001473 ORTHO05D003934 1.2e-123 447.2 367 66.8
Gohir.D11G258300 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.2e-123 447.2 461 56.8
Gorai.007G276500 Gossypium raimondii HOM05D001473 ORTHO05D003934 1.2e-123 447.2 461 56.8
arahy.Tifrunner.gnm1.ann1.33TMW6 Arachis hypogaea HOM05D001473 ORTHO05D003934 2.0e-123 446.4 451 56.5
arahy.Tifrunner.gnm1.ann1.HJHY8E Arachis hypogaea HOM05D001473 ORTHO05D003934 2.0e-123 446.4 450 56.9
arahy.Tifrunner.gnm1.ann1.R6YD0H Arachis hypogaea HOM05D001473 ORTHO05D003934 2.0e-123 446.4 450 56.9
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 2.6e-123 446.0 452 58.4
arahy.Tifrunner.gnm1.ann1.8L6PVU Arachis hypogaea HOM05D001473 ORTHO05D003934 4.4e-123 445.3 451 56.5
FvH4_6g01950 Fragaria vesca HOM05D001473 ORTHO05D003934 7.5e-123 444.5 451 58.3
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 7.5e-123 444.5 451 58.3
Lj1g0012496 Lotus japonicus HOM05D001473 ORTHO05D003934 7.5e-123 444.5 443 57.3
Phvul.004G090900 Phaseolus vulgaris HOM05D001473 ORTHO05D003934 9.8e-123 444.1 445 57.8
Oeu012234.1 Olea europaea HOM05D001473 ORTHO05D003934 1.3e-122 443.7 462 56.1
Actinidia40002 Actinidia chinensis HOM05D001473 ORTHO05D003934 1.7e-122 443.4 463 57.2
Atru.chr2.968 Acer truncatum HOM05D001473 ORTHO05D003934 2.2e-122 443.0 451 57.0
THA.LOC104805779 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 4.8e-122 441.8 461 56.4
VMungo0464G0145 Vigna mungo HOM05D001473 ORTHO05D003934 8.3e-122 441.0 409 61.4
AUR62023607 Chenopodium quinoa HOM05D001473 ORTHO05D003934 5.4e-121 438.3 461 54.9
Sc08g0009190 Simmondsia chinensis HOM05D001473 ORTHO05D003934 5.4e-121 438.3 451 56.8
Lalb_Chr15g0076051 Lupinus albus HOM05D001473 ORTHO05D003934 1.6e-120 436.8 444 56.1
Ca_09455_v3 Cicer arietinum L. HOM05D001473 ORTHO05D003934 4.5e-120 435.3 451 55.9
Lalb_Chr18g0044021 Lupinus albus HOM05D001473 ORTHO05D003934 4.5e-120 435.3 444 56.1
TPR.G6939 Trifolium pratense HOM05D001473 ORTHO05D003934 5.9e-120 434.9 441 56.5
vmacro19999 Vaccinium macrocarpon HOM05D001473 ORTHO05D003934 7.7e-120 434.5 371 65.5
Haze_25281 Corylus avellana HOM05D001473 ORTHO05D003934 1.0e-119 434.1 438 58.9
Carub.0001s0911 Capsella rubella HOM05D001473 ORTHO05D003934 1.1e-118 430.6 460 54.6
Medtr7g115550 Medicago truncatula HOM05D001473 ORTHO05D003934 1.5e-118 430.3 366 63.7
Aa31LG1G5220 Aethionema arabicum HOM05D001473 ORTHO05D003934 1.9e-118 429.9 461 54.7
AL1G20320 Arabidopsis lyrata HOM05D001473 ORTHO05D003934 2.5e-118 429.5 460 54.6
AUR62006826 Chenopodium quinoa HOM05D001473 ORTHO05D003934 2.5e-118 429.5 452 55.1
SEGI_38835 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 3.2e-118 429.1 467 53.3
Thhalv10006800m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 4.2e-118 428.7 461 54.7
C05p07840 Brassica napus HOM05D001473 ORTHO05D003934 7.2e-118 427.9 461 54.0
BolC5t29535H Brassica oleracea HOM05D001473 ORTHO05D003934 7.2e-118 427.9 461 54.0
Lsat_1_v5_gn_8_2880 Lactuca sativa HOM05D001473 ORTHO05D003934 7.2e-118 427.9 446 56.7
Psat3g006920 Pisum sativum HOM05D001473 ORTHO05D003934 7.2e-118 427.9 441 55.8
AT1G09770 Arabidopsis thaliana HOM05D001473 ORTHO05D003934 9.4e-118 427.6 461 54.2
EL10Ac4g09571 Beta vulgaris HOM05D001473 ORTHO05D003934 9.4e-118 427.6 450 55.3
COL.COLO4_15470 Corchorus olitorius HOM05D001473 ORTHO05D003934 9.4e-118 427.6 352 66.5
A06p06440 Brassica napus HOM05D001473 ORTHO05D003934 1.6e-117 426.8 461 54.0
BraA06t23855Z Brassica rapa HOM05D001473 ORTHO05D003934 1.6e-117 426.8 461 54.0
SalBow1G0011 Salvia bowleyana HOM05D001473 ORTHO05D003934 1.6e-117 426.8 457 54.5
AUR62000484 Chenopodium quinoa HOM05D001473 ORTHO05D003934 2.1e-117 426.4 367 63.5
Cc02_g08900 Coffea canephora HOM05D001473 ORTHO05D003934 4.7e-117 425.2 446 54.9
SEGI_20641 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 8.0e-117 424.5 461 53.8
THA.LOC104823763 Tarenaya hassleriana HOM05D001473 ORTHO05D003934 3.0e-116 422.5 461 54.4
AagrBONN_evm.TU.Sc2ySwM_368.3249 Anthoceros agrestis HOM05D001473 ORTHO05D003934 1.5e-115 420.2 462 52.6
HanXRQChr08g0225461 Helianthus annuus HOM05D001473 ORTHO05D003934 1.5e-115 420.2 457 54.7
SHI00615 Sapria himalayana HOM05D001473 ORTHO05D003934 2.6e-115 419.5 453 54.1
Sp1g08360 Schrenkiella parvula HOM05D001473 ORTHO05D003934 9.8e-115 417.5 461 53.4
Mapoly0014s0195 Marchantia polymorpha HOM05D001473 ORTHO05D003934 4.9e-114 415.2 462 52.4
CARHR009740 Cardamine hirsuta HOM05D001473 ORTHO05D003934 1.4e-113 413.7 449 53.9
C08p13180 Brassica napus HOM05D001473 ORTHO05D003934 1.8e-113 413.3 460 52.8
BolC8t48947H Brassica oleracea HOM05D001473 ORTHO05D003934 1.8e-113 413.3 460 52.8
Lj5g0018401 Lotus japonicus HOM05D001473 ORTHO05D003934 4.1e-113 412.1 414 58.5
A08p34350 Brassica napus HOM05D001473 ORTHO05D003934 5.4e-113 411.8 459 52.7
Migut.F01544 Erythranthe guttata HOM05D001473 ORTHO05D003934 9.2e-113 411.0 441 54.4
SGA_v2.0_scaffold1G00525 Striga asiatica HOM05D001473 ORTHO05D003934 1.2e-112 410.6 442 53.6
BraA08t35347Z Brassica rapa HOM05D001473 ORTHO05D003934 2.7e-112 409.5 458 52.6
PSO017G2945 Papaver somniferum HOM05D001473 ORTHO05D003934 5.9e-112 408.3 461 52.5
DCAR_023095 Daucus carota HOM05D001473 ORTHO05D003934 1.3e-111 407.1 447 53.9
TAR362G0879 Trochodendron aralioides HOM05D001473 ORTHO05D003934 6.6e-111 404.8 464 52.6
PSO063G2917 Papaver somniferum HOM05D001473 ORTHO05D003934 1.1e-110 404.1 459 52.3
unitig_747.g21794 Utricularia gibba HOM05D001473 ORTHO05D003934 1.1e-110 404.1 365 60.8
unitig_0.g2788 Utricularia gibba HOM05D001473 ORTHO05D003934 1.9e-110 403.3 365 61.1
ECA233G2045 Erigeron canadensis HOM05D001473 ORTHO05D003934 4.3e-110 402.1 439 54.9
CDE07G0773 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 9.5e-110 401.0 445 53.7
Aqoxy2G03659 Aquilegia oxysepala HOM05D001473 ORTHO05D003934 2.8e-109 399.4 473 51.0
CDE04G2649 Ceratophyllum demersum HOM05D001473 ORTHO05D003934 3.6e-109 399.1 449 52.3
SMO234G0053 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 3.6e-109 399.1 364 59.9
Solyc04g009950.3 Solanum lycopersicum HOM05D001473 ORTHO05D003934 4.7e-109 398.7 455 52.1
Sopen04g005080 Solanum pennellii HOM05D001473 ORTHO05D003934 4.7e-109 398.7 455 52.1
SMO196G0272 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 1.0e-108 397.5 360 59.7
PGSC0003DMG400011500 Solanum tuberosum HOM05D001473 ORTHO05D003934 1.8e-108 396.7 455 51.4
CAN.G1609.5 Capsicum annuum HOM05D001473 ORTHO05D003934 3.0e-108 396.0 452 52.0
SMO196G0202 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 5.2e-108 395.2 364 59.6
CSS0020922 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 8.9e-108 394.4 444 54.3
Pp3c3_17580 Physcomitrium patens HOM05D001473 ORTHO05D003934 1.5e-107 393.7 351 61.5
Peaxi162Scf00135g00313 Petunia axillaris HOM05D001473 ORTHO05D003934 3.2e-105 386.0 451 51.4
Os04g0348300 Oryza sativa ssp. japonica HOM05D001473 ORTHO05D003934 5.4e-105 385.2 460 51.5
CSS0046947 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 3.5e-104 382.5 461 52.5
Medtr5g010470 Medicago truncatula HOM05D001473 ORTHO05D003934 4.3e-102 375.6 441 52.2
CBR_g39826 Chara braunii HOM05D001473 ORTHO05D003934 1.4e-100 370.5 458 49.6
CSS0002418 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 9.8e-99 364.4 409 55.5
GSVIVG01023527001 Vitis vinifera HOM05D001473 ORTHO05D003934 4.9e-98 362.1 234 79.5
CsaV3_1G045350 Cucumis sativus L. HOM05D001473 ORTHO05D003934 6.4e-98 361.7 272 70.6
Thhalv10001097m.g Eutrema salsugineum HOM05D001473 ORTHO05D003934 1.9e-94 350.1 397 54.2
Lj5A229T67 Lonicera japonica HOM05D001473 ORTHO05D003934 2.5e-94 349.7 398 52.8
DCAR_029377 Daucus carota HOM05D001473 ORTHO05D003934 5.1e-87 325.5 397 50.9
CsaV3_UNG002030 Cucumis sativus L. HOM05D001473 ORTHO05D003934 4.9e-82 308.9 374 51.6
HPP92_023254 Vanilla planifolia HOM05D001473 ORTHO05D003934 4.0e-76 289.3 384 48.7
Migut.B01119 Erythranthe guttata HOM05D001473 ORTHO05D003934 8.9e-76 288.1 373 48.3
Sc03g0006090 Simmondsia chinensis HOM05D001473 ORTHO05D003934 6.4e-74 282.0 248 61.3
RcHm_v2.0_Chr5g0032281 Rosa chinensis HOM05D001473 ORTHO05D003934 2.1e-72 276.9 367 50.4
SMO196G0113 Selaginella moellendorffii HOM05D001473 ORTHO05D003934 1.3e-71 274.2 346 51.4
Lsat_1_v5_gn_8_72320 Lactuca sativa HOM05D001473 ORTHO05D003934 6.4e-66 255.4 256 56.6
Cre03.g197350 Chlamydomonas reinhardtii HOM05D001473 ORTHO05D003934 5.4e-65 252.3 369 43.6
Zm00001eb142770 Zea mays HOM05D001473 ORTHO05D003934 1.6e-64 250.8 364 45.9
PRCOL_00004307 Prasinoderma coloniale HOM05D001473 ORTHO05D003934 6.6e-63 245.4 355 43.1
MCO01G097 Micromonas commoda HOM05D001473 ORTHO05D003934 3.9e-55 219.5 253 50.2
Sc03g0006690 Simmondsia chinensis HOM05D001473 ORTHO05D003934 9.6e-54 214.9 288 48.3
HPP92_023313 Vanilla planifolia HOM05D001473 ORTHO05D003934 1.4e-52 211.1 240 52.5
FvH4_3g19210 Fragaria vesca HOM05D001473 ORTHO05D003934 4.0e-52 209.5 313 46.3
Gohir.A11G247950 Gossypium hirsutum HOM05D001473 ORTHO05D003934 1.7e-50 204.1 218 55.5
Cfa025479 Carpinus fangiana HOM05D001473 ORTHO05D003934 7.9e-48 195.3 398 36.9
Peaxi162Scf00304g00074 Petunia axillaris HOM05D001473 ORTHO05D003934 3.9e-47 193.0 202 55.9
Lsat_1_v5_gn_5_135881 Lactuca sativa HOM05D001473 ORTHO05D003934 5.0e-42 176.0 192 52.6
BcaC04g22223 Brassica carinata HOM05D001473 ORTHO05D003934 4.6e-40 169.5 174 55.2
C09p21880 Brassica napus HOM05D001473 ORTHO05D003934 4.6e-40 169.5 174 55.2
BolC9t55093H Brassica oleracea HOM05D001473 ORTHO05D003934 4.6e-40 169.5 174 55.2
Sc03g0006700 Simmondsia chinensis HOM05D001473 ORTHO05D003934 1.3e-39 167.9 107 78.5
A09p17580 Brassica napus HOM05D001473 ORTHO05D003934 3.0e-39 166.8 174 54.0
BraA09t37388Z Brassica rapa HOM05D001473 ORTHO05D003934 3.0e-39 166.8 174 54.0
MCO01G096 Micromonas commoda HOM05D001473 ORTHO05D003934 3.0e-39 166.8 102 79.4
BolC1t01331H Brassica oleracea HOM05D001473 ORTHO05D003934 6.7e-39 165.6 174 54.6
BcaB07g31211 Brassica carinata HOM05D001473 ORTHO05D003934 1.8e-36 157.5 174 51.7
Lsat_1_v5_gn_5_132420 Lactuca sativa HOM05D001473 ORTHO05D003934 4.5e-35 152.9 109 67.0
Haze_26225 Corylus avellana HOM05D001473 ORTHO05D003934 1.0e-34 151.8 254 40.2
ATR0739G164 Amborella trichopoda HOM05D001473 ORTHO05D003934 3.8e-34 149.8 130 63.1
PSO210G0556 Papaver somniferum HOM05D001473 ORTHO05D003934 1.4e-33 147.9 174 47.7
Rhsim05G0215100 Rhododendron simsii HOM05D001473 ORTHO05D003934 2.0e-30 137.5 189 47.6
PSO832G3554 Papaver somniferum HOM05D001473 ORTHO05D003934 2.2e-29 134.0 106 64.2
Peaxi162Scf00304g00075 Petunia axillaris HOM05D001473 ORTHO05D003934 1.4e-28 131.3 249 38.6
Gohir.A11G247900 Gossypium hirsutum HOM05D001473 ORTHO05D003934 3.4e-27 126.7 225 40.9
Sc03g0006100 Simmondsia chinensis HOM05D001473 ORTHO05D003934 5.0e-26 122.9 160 48.8
CSS0012083 Camellia sinensis var. sinensis HOM05D001473 ORTHO05D003934 3.0e-23 113.6 157 45.9
BcaB08g37389 Brassica carinata HOM05D001473 ORTHO05D003934 1.2e-16 91.7 100 55.0
Psat5g036600 Pisum sativum HOM05D000945 ORTHO05D000919 1.0e-15 88.6 138 41.3
BcaB08g37390 Brassica carinata HOM05D001473 ORTHO05D003934 7.5e-14 82.4 130 44.6
Migut.F01545 Erythranthe guttata HOM05D001473 ORTHO05D003934 7.5e-14 82.4 53 75.5
arahy.Tifrunner.gnm1.ann1.E23V63 Arachis hypogaea HOM05D001473 ORTHO05D003934 9.7e-14 82.0 67 67.2
SEGI_17278 Sequoiadendron giganteum HOM05D001473 ORTHO05D003934 2.0e-11 74.3 56 66.1
CAN.G1363.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-06 58.5 119 36.1
CsaV3_1G045340 Cucumis sativus L. HOM05D001473 ORTHO05D003934 7.5e-06 55.8 37 70.3


User provided reference genes

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