Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 2613.2 1314 100.0
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 2191.0 1319 83.1
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 2164.4 1319 82.5
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1988.8 1325 74.3
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1954.5 1323 73.3
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1946.4 1326 73.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1944.5 1326 74.3
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1941.4 1322 72.8
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1936.8 1327 73.6
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1931.4 1324 73.8
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1926.8 1327 73.2
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1912.1 1325 73.1
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1912.1 1325 73.1
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1909.8 1325 73.0
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1908.3 1325 72.9
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1903.6 1319 72.4
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1902.5 1324 72.3
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1897.9 1322 72.5
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1894.4 1325 72.5
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1887.8 1328 71.2
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1884.4 1323 72.1
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1880.1 1325 72.2
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1875.5 1246 76.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1873.2 1330 71.0
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1849.7 1330 70.9
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1835.8 1322 70.7
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1835.1 1328 69.6
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1833.2 1243 74.1
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1824.3 1322 68.8
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1822.8 1324 68.5
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1821.6 1323 68.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1817.7 1243 73.6
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1805.0 1326 69.1
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1795.0 1321 68.7
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1795.0 1323 68.0
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1786.5 1324 68.1
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1783.1 1320 68.0
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1781.9 1324 67.3
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1780.4 1322 67.7
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1776.5 1320 67.8
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1772.3 1320 67.6
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1771.5 1323 67.6
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1760.0 1326 66.9
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1758.8 1276 68.9
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1757.7 1323 66.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1756.1 1321 66.9
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1752.3 1335 66.6
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1751.5 1320 66.6
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1751.1 1345 66.2
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1746.5 1316 68.2
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1744.2 1333 66.0
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1737.2 1326 66.7
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1736.5 1270 68.7
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1733.8 1318 67.1
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1733.0 1327 65.7
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1723.4 1328 64.8
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1718.7 1339 65.7
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1715.3 1324 65.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1709.1 1327 65.3
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1706.8 1239 68.8
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1704.9 1258 68.1
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1703.7 1320 64.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1700.6 1342 65.9
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1694.9 1095 78.0
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1668.7 1329 63.2
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1657.9 1338 62.4
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1650.2 1326 63.6
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1648.3 1100 74.3
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1644.4 1320 63.0
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1636.3 1325 62.8
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1627.5 1325 63.2
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1623.6 1325 62.6
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1621.3 1326 62.7
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1619.8 1322 61.7
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1617.1 1325 62.7
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1615.1 1326 63.0
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1612.0 1329 62.8
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1610.9 1329 62.8
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1605.1 1330 62.5
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1600.9 1353 60.9
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1597.4 1191 67.2
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1591.6 1318 62.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1580.8 1315 62.3
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1571.2 1282 65.1
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1540.0 1131 68.1
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1531.9 1109 68.5
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1526.5 937 81.3
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1520.8 1323 59.8
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1509.2 1092 69.4
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1488.8 1336 56.2
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1468.0 1319 60.2
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1451.4 1554 51.7
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1447.6 1320 55.7
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1439.9 1147 63.6
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1396.7 1315 55.5
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1379.8 1347 54.9
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1286.2 901 71.1
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1223.4 863 71.7
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1218.4 1343 51.7
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1139.8 1254 49.2
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1110.9 756 74.5
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 3.3e-248 862.8 1363 38.4
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.8e-233 813.9 851 49.4
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 6.7e-233 812.0 1205 39.9
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 2.6e-229 800.0 1316 37.9
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.1e-226 788.9 1195 39.8
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 2.4e-214 750.4 807 51.7
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 3.1e-161 573.9 1501 30.1
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 5.3e-153 546.6 358 77.9
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 5.5e-142 510.0 376 64.6
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 9.3e-142 509.2 460 59.1
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 9.8e-91 339.7 313 59.7
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 8.6e-87 326.6 1367 26.8
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 5.6e-86 323.9 255 62.0
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 2.0e-80 305.4 302 53.3
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.0e-79 303.1 1633 25.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.4e-65 255.4 196 70.9
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.2e-61 243.0 1288 24.9
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 2.7e-56 225.3 201 58.7
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 2.5e-54 218.8 224 52.7
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.2e-51 209.9 167 68.9
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 1.1e-49 203.4 1352 25.1
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 3.8e-42 178.3 130 70.8
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.0e-39 168.7 126 69.0
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 5.6e-38 164.5 288 42.7
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.8e-31 142.9 138 55.8


User provided reference genes

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