Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p025876 Quercus lobata HOM05D003536 ORTHO05D004233 1.1e-33 146.4 90 100.0
FvH4_3g22850 Fragaria vesca HOM05D003536 ORTHO05D004233 3.0e-31 138.3 90 92.2
FAN16G1068 Fragaria x ananassa HOM05D003536 ORTHO05D004233 3.0e-31 138.3 90 92.2
FAN21G1823 Fragaria x ananassa HOM05D003536 ORTHO05D004233 3.0e-31 138.3 90 92.2
RcHm_v2.0_Chr5g0040091 Rosa chinensis HOM05D003536 ORTHO05D004233 3.0e-31 138.3 90 92.2
FAN25G2670 Fragaria x ananassa HOM05D003536 ORTHO05D004233 3.9e-31 137.9 89 93.3
CANSAT11G2387 Cannabis sativa HOM05D003536 ORTHO05D004233 5.1e-31 137.5 90 88.9
Rhsim02G0085700 Rhododendron simsii HOM05D003536 ORTHO05D004233 6.6e-31 137.1 90 90.0
Dinv33222 Davidia involucrata HOM05D003536 ORTHO05D004233 8.6e-31 136.7 90 88.9
Prupe.4G214600 Prunus persica HOM05D003536 ORTHO05D004233 8.6e-31 136.7 90 88.9
SGA_v2.0_scaffold189G40381 Striga asiatica HOM05D003536 ORTHO05D004233 1.1e-30 136.3 90 87.8
CSS0046625 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 1.5e-30 136.0 90 90.0
Cpa.g.sc7.5 Carica papaya HOM05D003536 ORTHO05D004233 1.5e-30 136.0 90 90.0
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 1.5e-30 136.0 77 92.2
Sabra11G0041300 Salix brachista HOM05D003536 ORTHO05D004233 1.5e-30 136.0 90 91.1
SGA_v2.0_scaffold20G08963 Striga asiatica HOM05D003536 ORTHO05D004233 1.5e-30 136.0 90 83.3
Atru.chr11.1823 Acer truncatum HOM05D003536 ORTHO05D004233 3.3e-30 134.8 90 88.9
TWI63G0523 Tripterygium wilfordii HOM05D003536 ORTHO05D004233 3.3e-30 134.8 90 87.8
MSTRG.15254 Avicennia marina HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 82.2
CiPaw.11G159200 Carya illinoinensis HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 88.9
MELO3C022490.2 Cucumis melo HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 81.1
CsaV3_6G006300 Cucumis sativus L. HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 81.1
MD11G1217000 Malus domestica HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 87.8
TWI38G2316 Tripterygium wilfordii HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 87.8
GSVIVG01038187001 Vitis vinifera HOM05D003536 ORTHO05D004233 4.3e-30 134.4 90 91.1
Manes.09G040400 Manihot esculenta HOM05D003536 ORTHO05D004233 7.3e-30 133.7 90 90.0
MD03G1200000 Malus domestica HOM05D003536 ORTHO05D004233 9.5e-30 133.3 90 82.2
Thecc.06G179100 Theobroma cacao HOM05D003536 ORTHO05D004233 9.5e-30 133.3 90 85.6
Gorai.009G166000 Gossypium raimondii HOM05D003536 ORTHO05D004233 1.2e-29 132.9 90 87.8
Oeu018052.1 Olea europaea HOM05D003536 ORTHO05D004233 1.2e-29 132.9 90 81.1
CiPaw.12G113000 Carya illinoinensis HOM05D003536 ORTHO05D004233 1.6e-29 132.5 90 87.8
DCAR_012946 Daucus carota HOM05D003536 ORTHO05D004233 1.6e-29 132.5 90 84.4
Gohir.D05G160800 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.6e-29 132.5 90 87.8
Ciclev10009295m.g Citrus clementina HOM05D003536 ORTHO05D004233 2.1e-29 132.1 90 78.9
Duzib160G0652 Durio zibethinus HOM05D003536 ORTHO05D004233 2.1e-29 132.1 90 85.6
Duzib235G0074 Durio zibethinus HOM05D003536 ORTHO05D004233 6.2e-29 130.6 90 84.4
Sed0014057 Sechium edule HOM05D003536 ORTHO05D004233 6.2e-29 130.6 90 77.8
Migut.H00835 Erythranthe guttata HOM05D003536 ORTHO05D004233 8.1e-29 130.2 90 85.6
Migut.L00733 Erythranthe guttata HOM05D003536 ORTHO05D004233 8.1e-29 130.2 90 78.9
Migut.L00928 Erythranthe guttata HOM05D003536 ORTHO05D004233 8.1e-29 130.2 90 78.9
TAR629G2543 Trochodendron aralioides HOM05D003536 ORTHO05D004233 8.1e-29 130.2 90 86.7
Cc03_g14490 Coffea canephora HOM05D003536 ORTHO05D004233 1.4e-28 129.4 90 77.8
Duzib192G0083 Durio zibethinus HOM05D003536 ORTHO05D004233 1.4e-28 129.4 76 89.5
QL01p015305 Quercus lobata HOM05D003536 ORTHO05D004233 1.4e-28 129.4 90 85.6
Sed0001901 Sechium edule HOM05D003536 ORTHO05D004233 1.4e-28 129.4 90 76.7
CSS0012110 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 1.8e-28 129.0 90 85.6
Potri.011G059700 Populus trichocarpa HOM05D003536 ORTHO05D004233 1.8e-28 129.0 90 85.6
Gohir.D09G073600 Gossypium hirsutum HOM05D003536 ORTHO05D004233 2.3e-28 128.6 90 84.4
Gorai.006G088600 Gossypium raimondii HOM05D003536 ORTHO05D004233 2.3e-28 128.6 90 84.4
Aa31LG6G11010 Aethionema arabicum HOM05D003536 ORTHO05D004233 5.2e-28 127.5 90 76.7
EL10Ac2g03342 Beta vulgaris HOM05D003536 ORTHO05D004233 5.2e-28 127.5 78 84.6
CSS0007932 Camellia sinensis var. sinensis HOM05D003536 ORTHO05D004233 5.2e-28 127.5 90 84.4
unitig_46.g18655 Utricularia gibba HOM05D003536 ORTHO05D004233 5.2e-28 127.5 90 77.8
BcaB03g12101 Brassica carinata HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BcaB03g13924 Brassica carinata HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BcaB07g32470 Brassica carinata HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BcaC01g00063 Brassica carinata HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BcaC05g26899 Brassica carinata HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
A09p37550 Brassica napus HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
C05p27490 Brassica napus HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BolC5t31469H Brassica oleracea HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BolC7t42188H Brassica oleracea HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
BraA09t39265Z Brassica rapa HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 75.6
PGR119G0635 Punica granatum HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 81.1
TPR.G33765 Trifolium pratense HOM05D003536 ORTHO05D004233 6.8e-28 127.1 90 86.7
unitig_37.g12355 Utricularia gibba HOM05D003536 ORTHO05D004233 8.9e-28 126.7 90 77.8
arahy.Tifrunner.gnm1.ann1.3L4J3R Arachis hypogaea HOM05D003536 ORTHO05D004233 1.2e-27 126.3 90 77.8
arahy.Tifrunner.gnm1.ann1.NDA9EK Arachis hypogaea HOM05D003536 ORTHO05D004233 1.2e-27 126.3 90 77.8
Gohir.A09G074000 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.2e-27 126.3 90 82.2
Gohir.A11G169750 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.2e-27 126.3 92 84.8
Nn6g33747 Nelumbo nucifera HOM05D003536 ORTHO05D004233 1.2e-27 126.3 90 83.3
THA.LOC104812620 Tarenaya hassleriana HOM05D003536 ORTHO05D004233 1.2e-27 126.3 89 76.4
Aqoxy6G01555 Aquilegia oxysepala HOM05D003536 ORTHO05D004233 1.5e-27 125.9 90 81.1
BraA07t28906Z Brassica rapa HOM05D003536 ORTHO05D004233 1.5e-27 125.9 90 74.4
Thhalv10008609m.g Eutrema salsugineum HOM05D003536 ORTHO05D004233 1.5e-27 125.9 90 74.4
Medtr3g052210 Medicago truncatula HOM05D003536 ORTHO05D004233 1.5e-27 125.9 90 85.6
Peaxi162Scf00341g00410 Petunia axillaris HOM05D003536 ORTHO05D004233 1.5e-27 125.9 90 82.2
BolC3t19791H Brassica oleracea HOM05D003536 ORTHO05D004233 2.0e-27 125.6 78 83.3
Eucgr.J00643 Eucalyptus grandis HOM05D003536 ORTHO05D004233 2.0e-27 125.6 90 78.9
Atru.chr2.3484 Acer truncatum HOM05D003536 ORTHO05D004233 2.6e-27 125.2 90 83.3
Psat5g178600 Pisum sativum HOM05D003536 ORTHO05D004233 2.6e-27 125.2 90 84.4
Glyma.14G023200 Glycine max HOM05D003536 ORTHO05D004233 3.4e-27 124.8 90 76.7
A07p11150 Brassica napus HOM05D003536 ORTHO05D004233 4.4e-27 124.4 78 82.1
Aqoxy1G04249 Aquilegia oxysepala HOM05D003536 ORTHO05D004233 5.8e-27 124.0 90 72.2
BraA08t34499Z Brassica rapa HOM05D003536 ORTHO05D004233 5.8e-27 124.0 78 82.1
Gohir.D10G029100 Gossypium hirsutum HOM05D003536 ORTHO05D004233 7.5e-27 123.6 77 85.7
Gorai.011G031000 Gossypium raimondii HOM05D003536 ORTHO05D004233 7.5e-27 123.6 77 85.7
Manes.08G040100 Manihot esculenta HOM05D003536 ORTHO05D004233 7.5e-27 123.6 90 85.6
Nitab4.5_0006944g0020 Nicotiana tabacum HOM05D003536 ORTHO05D004233 7.5e-27 123.6 90 81.1
ECA238G2064 Erigeron canadensis HOM05D003536 ORTHO05D004233 9.9e-27 123.2 90 80.0
Glyma.02G291600 Glycine max HOM05D003536 ORTHO05D004233 9.9e-27 123.2 90 75.6
Gohir.A10G028700 Gossypium hirsutum HOM05D003536 ORTHO05D004233 9.9e-27 123.2 77 85.7
Phvul.008G267900 Phaseolus vulgaris HOM05D003536 ORTHO05D004233 9.9e-27 123.2 90 73.3
THA.LOC104820574 Tarenaya hassleriana HOM05D003536 ORTHO05D004233 9.9e-27 123.2 77 81.8
C07p16800 Brassica napus HOM05D003536 ORTHO05D004233 1.3e-26 122.9 78 82.1
HanXRQChr15g0493141 Helianthus annuus HOM05D003536 ORTHO05D004233 1.3e-26 122.9 90 81.1
Carub.0001s2696 Capsella rubella HOM05D003536 ORTHO05D004233 2.2e-26 122.1 90 72.2
HanXRQChr14g0462891 Helianthus annuus HOM05D003536 ORTHO05D004233 2.2e-26 122.1 90 72.2
Sopen12g031020 Solanum pennellii HOM05D003536 ORTHO05D004233 2.2e-26 122.1 90 80.0
PGSC0003DMG400015457 Solanum tuberosum HOM05D003536 ORTHO05D004233 2.2e-26 122.1 90 80.0
AL1G42100 Arabidopsis lyrata HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 72.2
AT1G28490 Arabidopsis thaliana HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 72.2
CARHR027980 Cardamine hirsuta HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 72.2
Lalb_Chr04g0248391 Lupinus albus HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 72.2
Os01g0963300 Oryza sativa ssp. japonica HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 81.1
Potri.004G050800 Populus trichocarpa HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 83.3
Solyc12g089150.2 Solanum lycopersicum HOM05D003536 ORTHO05D004233 2.9e-26 121.7 90 78.9
ATR0681G197 Amborella trichopoda HOM05D003536 ORTHO05D004233 3.7e-26 121.3 90 68.9
PSO339G1992 Papaver somniferum HOM05D003536 ORTHO05D004233 4.9e-26 120.9 76 80.3
PSO648G0105 Papaver somniferum HOM05D003536 ORTHO05D004233 4.9e-26 120.9 76 80.3
HPP92_012149 Vanilla planifolia HOM05D003536 ORTHO05D004233 6.4e-26 120.6 90 74.4
Lj6g0024406 Lotus japonicus HOM05D003536 ORTHO05D004233 8.3e-26 120.2 90 70.0
Medtr5g092870 Medicago truncatula HOM05D003536 ORTHO05D004233 8.3e-26 120.2 77 81.8
Lsat_1_v5_gn_9_58001 Lactuca sativa HOM05D003536 ORTHO05D004233 1.1e-25 119.8 76 81.6
SEGI_08171 Sequoiadendron giganteum HOM05D003536 ORTHO05D004233 1.1e-25 119.8 78 75.6
Sc12g0007550 Simmondsia chinensis HOM05D003536 ORTHO05D004233 1.1e-25 119.8 90 73.3
VMungo0647G0941 Vigna mungo HOM05D003536 ORTHO05D004233 1.1e-25 119.8 77 81.8
Glyma.08G316900 Glycine max HOM05D003536 ORTHO05D004233 1.4e-25 119.4 90 72.2
Glyma.18G096200 Glycine max HOM05D003536 ORTHO05D004233 1.4e-25 119.4 90 72.2
CAN.G1139.15 Capsicum annuum HOM05D003536 ORTHO05D004233 2.4e-25 118.6 90 76.7
Zm00001eb140280 Zea mays HOM05D003536 ORTHO05D004233 2.4e-25 118.6 90 78.9
Lalb_Chr15g0081231 Lupinus albus HOM05D003536 ORTHO05D004233 3.2e-25 118.2 90 71.1
Lalb_Chr15g0081241 Lupinus albus HOM05D003536 ORTHO05D004233 3.2e-25 118.2 90 71.1
Lalb_Chr15g0081251 Lupinus albus HOM05D003536 ORTHO05D004233 3.2e-25 118.2 90 71.1
TPR.G1154 Trifolium pratense HOM05D003536 ORTHO05D004233 4.1e-25 117.9 90 71.1
A08p25480 Brassica napus HOM05D003536 ORTHO05D004233 5.4e-25 117.5 71 83.1
MBI05_g13422_MAGBIO Magnolia biondii HOM05D003536 ORTHO05D004233 7.1e-25 117.1 90 75.6
Zm00001eb400730 Zea mays HOM05D003536 ORTHO05D004233 7.1e-25 117.1 90 77.8
Gohir.A07G160875 Gossypium hirsutum HOM05D003536 ORTHO05D004233 9.2e-25 116.7 87 83.9
Psat2g011920 Pisum sativum HOM05D003536 ORTHO05D004233 9.2e-25 116.7 90 68.9
LjContig00272g0022132 Lotus japonicus HOM05D003536 ORTHO05D004233 1.2e-24 116.3 90 68.9
Os11g0168100 Oryza sativa ssp. japonica HOM05D003536 ORTHO05D004233 2.1e-24 115.5 90 70.0
CDE04G1024 Ceratophyllum demersum HOM05D003536 ORTHO05D004233 7.8e-24 113.6 67 83.6
CDE07G1169 Ceratophyllum demersum HOM05D004887 ORTHO05D006168 1.0e-23 113.2 67 83.6
Gohir.A05G158100 Gossypium hirsutum HOM05D003536 ORTHO05D004233 1.0e-23 113.2 66 86.4
VMungo0540G1494 Vigna mungo HOM05D003536 ORTHO05D004233 1.7e-23 112.5 90 66.7
Phvul.006G044400 Phaseolus vulgaris HOM05D003536 ORTHO05D004233 2.3e-23 112.1 90 66.7
Gohir.A12G052800 Gossypium hirsutum HOM05D003536 ORTHO05D004233 6.6e-23 110.5 65 86.2
AagrBONN_evm.TU.Sc2ySwM_344.813 Anthoceros agrestis HOM05D003536 ORTHO05D004233 5.6e-22 107.5 77 68.8
Pp3c17_23220 Physcomitrium patens HOM05D003536 ORTHO05D004233 3.1e-20 101.7 78 65.4
Cfa019551 Carpinus fangiana HOM05D003536 ORTHO05D004233 5.2e-20 100.9 54 94.4
Haze_23535 Corylus avellana HOM05D003536 ORTHO05D004233 5.2e-20 100.9 54 94.4
COL.COLO4_31399 Corchorus olitorius HOM05D003536 ORTHO05D004233 6.8e-20 100.5 54 94.4
RhsimUnG0015200 Rhododendron simsii HOM05D003536 ORTHO05D004233 2.0e-19 99.0 54 92.6
DCAR_019273 Daucus carota HOM05D003536 ORTHO05D004233 3.4e-19 98.2 54 90.7
Oeu039254.1 Olea europaea HOM05D003536 ORTHO05D004233 7.6e-19 97.1 54 88.9
Gohir.A01G165866 Gossypium hirsutum HOM05D003536 ORTHO05D004233 2.9e-18 95.1 52 92.3
AUR62037629 Chenopodium quinoa HOM05D003536 ORTHO05D004233 4.9e-18 94.4 54 85.2
Lsat_1_v5_gn_2_134160 Lactuca sativa HOM05D003536 ORTHO05D004233 6.4e-18 94.0 56 82.1
Sp1g24750 Schrenkiella parvula HOM05D003536 ORTHO05D004233 6.4e-18 94.0 60 78.3
SMO337G0082 Selaginella moellendorffii HOM05D003536 ORTHO05D004233 6.4e-18 94.0 90 53.3
C03p75320 Brassica napus HOM05D003536 ORTHO05D004233 8.4e-18 93.6 78 70.5
Nn1g00740 Nelumbo nucifera HOM05D003536 ORTHO05D004233 1.1e-17 93.2 54 83.3
AUR62039177 Chenopodium quinoa HOM05D003536 ORTHO05D004233 1.4e-17 92.8 54 83.3
TAR375G0806 Trochodendron aralioides HOM05D003536 ORTHO05D004233 3.2e-17 91.7 76 65.8
vmacro02467 Vaccinium macrocarpon HOM05D003536 ORTHO05D004233 3.2e-17 91.7 54 83.3
Actinidia28974 Actinidia chinensis HOM05D003536 ORTHO05D004233 5.4e-17 90.9 68 85.3
Hund02378 Selenicereus undatus HOM05D003536 ORTHO05D004233 5.4e-17 90.9 56 80.4
SMO144G0089 Selaginella moellendorffii HOM05D003536 ORTHO05D004233 2.7e-16 88.6 73 58.9
Ca_06324_v3 Cicer arietinum L. HOM05D003536 ORTHO05D004233 1.7e-15 85.9 90 56.7
Mapoly0079s0013 Marchantia polymorpha HOM05D003536 ORTHO05D004233 3.9e-15 84.7 90 45.6
Nitab4.5_0015265g0010 Nicotiana tabacum HOM05D003536 ORTHO05D004233 3.9e-15 84.7 52 82.7
Mapoly0140s0004 Marchantia polymorpha HOM05D003536 ORTHO05D004233 8.7e-15 83.6 77 51.9
ClCG06G000520 Citrullus lanatus HOM05D003536 ORTHO05D004233 1.1e-14 83.2 48 85.4
CBR_g4120 Chara braunii HOM05D003536 ORTHO05D004233 1.5e-14 82.8 90 51.1
MCO15G081 Micromonas commoda HOM05D003536 ORTHO05D004233 2.5e-14 82.0 76 55.3
Pp3c3_31110 Physcomitrium patens HOM05D003536 ORTHO05D004233 5.6e-14 80.9 75 53.3
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 9.6e-14 80.1 57 61.4
PRCOL_00003132 Prasinoderma coloniale HOM05D003536 ORTHO05D004233 1.8e-12 75.9 78 48.7
vmacro15697 Vaccinium macrocarpon HOM05D003536 ORTHO05D004233 9.0e-12 73.6 39 94.9
Lj2A346T41 Lonicera japonica HOM05D003536 ORTHO05D004233 2.1e-08 62.4 32 96.9
Haze_09311 Corylus avellana HOM05D003536 ORTHO05D004233 1.0e-07 60.1 35 82.9
QL01p015314 Quercus lobata HOM05D003536 ORTHO05D004233 3.0e-07 58.5 49 55.1
Cre06.g290100 Chlamydomonas reinhardtii HOM05D003536 ORTHO05D004233 5.1e-07 57.8 74 37.8


User provided reference genes

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