Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.0e-146 522.3 250 100.0
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 4.2e-136 488.0 247 94.7
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.2e-133 479.9 247 93.5
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 6.1e-127 457.6 247 87.9
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 7.5e-125 450.7 246 86.2
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 1.3e-124 449.9 247 86.2
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 1.4e-123 446.4 246 85.8
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 2.4e-123 445.7 247 85.4
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 3.1e-123 445.3 247 85.0
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 9.2e-123 443.7 246 85.8
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 3.5e-122 441.8 246 85.4
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 6.6e-121 437.6 247 83.8
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 6.6e-121 437.6 247 83.8
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 6.6e-121 437.6 245 83.7
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 8.6e-121 437.2 247 83.0
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.1e-120 436.8 247 83.0
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.5e-120 435.6 247 83.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 4.3e-120 434.9 246 82.5
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 9.5e-120 433.7 246 82.9
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.2e-119 433.3 246 83.7
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 2.1e-119 432.6 248 83.9
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 2.8e-119 432.2 245 82.9
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 3.6e-119 431.8 247 80.2
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 3.6e-119 431.8 247 80.6
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 4.7e-119 431.4 238 84.5
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.0e-118 430.3 245 82.4
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 1.4e-118 429.9 238 84.5
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 2.3e-118 429.1 246 82.9
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 4.0e-118 428.3 246 82.9
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 8.9e-118 427.2 246 81.7
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 2.0e-117 426.0 245 82.9
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.6e-117 425.6 250 80.0
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 3.4e-117 425.2 246 82.1
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 5.7e-117 424.5 247 81.0
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 5.7e-117 424.5 247 81.4
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 9.8e-117 423.7 238 82.4
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 2.2e-116 422.5 248 79.8
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.9e-116 422.2 247 80.2
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 3.7e-116 421.8 247 81.0
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 3.7e-116 421.8 246 80.5
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 4.9e-116 421.4 246 80.9
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 6.4e-116 421.0 247 80.2
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 8.3e-116 420.6 247 79.8
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 1.1e-115 420.2 249 78.3
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.1e-115 420.2 239 82.4
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 1.1e-115 420.2 244 81.1
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.1e-115 420.2 239 82.0
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.4e-115 419.9 245 81.2
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.8e-115 419.5 247 79.4
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 5.4e-115 417.9 232 86.2
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 5.4e-115 417.9 248 80.2
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 7.0e-115 417.5 246 79.3
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 9.2e-115 417.2 246 79.3
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.2e-114 416.8 246 79.7
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 2.0e-114 416.0 246 80.1
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 4.6e-114 414.8 239 81.6
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 4.6e-114 414.8 246 80.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 1.3e-113 413.3 231 82.3
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.7e-113 412.9 245 80.0
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 3.0e-113 412.1 245 78.4
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 5.0e-113 411.4 245 80.0
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 3.3e-112 408.7 248 77.0
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 3.3e-112 408.7 248 76.2
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 4.3e-112 408.3 249 77.1
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 5.6e-112 407.9 247 76.1
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 4.7e-111 404.8 237 79.3
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 4.7e-111 404.8 249 76.7
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 6.2e-111 404.4 247 78.9
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 6.2e-111 404.4 247 78.9
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 8.0e-111 404.1 246 76.8
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 8.0e-111 404.1 246 76.8
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 4.0e-110 401.7 245 77.1
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 8.9e-110 400.6 245 76.3
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 8.9e-110 400.6 245 76.3
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.2e-109 400.2 246 76.4
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.5e-109 399.8 264 72.3
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 2.6e-109 399.1 249 74.7
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.4e-109 398.7 234 79.5
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 3.4e-109 398.7 245 76.3
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 4.4e-109 398.3 249 74.7
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 4.4e-109 398.3 245 75.9
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 5.8e-109 397.9 247 76.1
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 1.3e-108 396.7 243 78.2
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.9e-108 394.8 246 75.6
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 8.3e-108 394.0 247 74.9
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 8.3e-108 394.0 245 76.7
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.9e-107 392.9 246 75.6
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 5.4e-107 391.3 239 77.4
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 7.0e-107 391.0 246 77.2
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 9.2e-107 390.6 231 77.1
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 4.6e-106 388.3 216 83.3
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 1.7e-105 386.3 245 76.3
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 6.6e-105 384.4 232 77.2
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 8.6e-105 384.0 241 75.5
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 4.7e-103 378.3 298 63.1
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.5e-96 356.7 247 72.9
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 2.1e-95 352.8 252 71.8
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.4e-94 350.1 208 78.4
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 5.1e-89 331.6 249 61.8
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 7.3e-88 327.8 189 81.0
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.8e-87 325.9 228 64.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.1e-86 322.4 183 83.6
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.1e-86 322.4 183 83.6
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.4e-78 297.0 196 74.5
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 2.9e-76 289.3 237 56.5
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 4.5e-69 265.4 149 81.2
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 6.0e-66 255.0 189 63.5
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.1e-64 250.8 151 72.2
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 2.5e-64 249.6 149 80.5
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 1.6e-58 230.3 201 57.7
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 3.7e-39 166.0 167 47.9
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 2.4e-30 136.7 78 79.5
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.7e-20 104.0 59 79.7
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 2.9e-20 103.2 58 79.3
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 3.8e-12 76.3 55 61.8
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 6.1e-10 68.9 52 67.3
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 9.8e-08 61.6 174 29.3
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 9.8e-08 61.6 223 28.3
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 9.2e-06 55.1 170 28.8


User provided reference genes

Program Settings