Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.3e-193 679.5 335 100.0
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 7.3e-184 647.1 335 95.5
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 8.1e-159 563.9 335 83.0
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 3.8e-156 555.1 335 81.5
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 4.2e-155 551.6 332 81.9
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 2.5e-152 542.3 334 80.8
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 2.1e-151 539.3 331 81.0
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 8.1e-151 537.3 313 82.4
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 6.9e-150 534.3 334 79.6
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 9.0e-150 533.9 331 79.8
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 2.0e-149 532.7 331 79.8
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 2.6e-149 532.3 343 77.6
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 5.8e-149 531.2 332 80.1
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 2.9e-148 528.9 329 78.7
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 3.8e-148 528.5 331 79.2
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 5.1e-145 518.1 315 80.6
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 1.5e-144 516.5 332 77.7
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 1.3e-143 513.5 336 75.6
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 3.7e-143 511.9 333 76.9
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 6.3e-143 511.1 336 76.8
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 6.3e-143 511.1 334 76.0
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.1e-142 510.4 335 75.8
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 4.1e-142 508.4 339 75.2
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 4.1e-142 508.4 336 76.5
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 5.3e-142 508.1 331 76.1
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 6.9e-142 507.7 330 73.3
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 9.0e-142 507.3 336 76.2
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.5e-141 506.5 335 76.1
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 5.0e-140 501.5 336 75.3
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 5.0e-140 501.5 342 74.6
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 5.0e-140 501.5 337 73.3
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 6.5e-140 501.1 332 74.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 8.5e-140 500.7 329 74.8
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 8.5e-140 500.7 311 77.5
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.4e-139 500.0 336 74.7
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 4.2e-139 498.4 329 75.1
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.2e-138 496.9 336 73.8
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 1.8e-137 493.0 306 78.8
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 2.3e-137 492.7 340 73.8
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 3.9e-137 491.9 311 76.5
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 4.3e-136 488.4 340 72.6
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 5.7e-136 488.0 337 71.2
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 7.4e-136 487.6 330 73.3
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.3e-135 486.9 331 71.9
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 4.8e-135 485.0 329 74.2
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 1.1e-134 483.8 349 70.5
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 1.4e-134 483.4 334 72.2
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.8e-134 483.0 341 72.4
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 1.8e-134 483.0 329 71.1
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 4.1e-134 481.9 329 73.3
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 4.1e-134 481.9 329 71.1
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 1.2e-133 480.3 337 71.8
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 1.5e-133 479.9 333 74.2
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.0e-133 479.6 247 93.5
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 5.9e-133 478.0 339 69.9
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 7.7e-133 477.6 329 71.7
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 1.7e-132 476.5 329 70.2
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 3.8e-132 475.3 332 70.5
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 4.8e-127 458.4 332 68.4
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 1.8e-126 456.4 326 71.2
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.4e-126 456.1 328 69.2
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 3.1e-126 455.7 339 70.5
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 5.3e-126 454.9 330 70.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.5e-125 453.4 295 73.2
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 2.0e-125 453.0 341 70.1
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 5.9e-125 451.4 341 70.1
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 5.9e-125 451.4 347 65.4
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 7.7e-125 451.1 338 69.8
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 1.0e-124 450.7 315 69.5
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 5.0e-124 448.4 305 71.8
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 6.5e-124 448.0 332 68.4
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 1.9e-123 446.4 271 79.0
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.2e-123 445.7 283 74.6
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 4.2e-123 445.3 267 79.0
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 5.5e-123 444.9 300 73.7
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 5.5e-123 444.9 300 73.7
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 5.5e-123 444.9 329 67.2
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.4e-121 440.3 321 69.8
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 2.3e-121 439.5 300 72.7
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 2.3e-121 439.5 300 72.7
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 2.3e-121 439.5 335 67.2
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 2.3e-121 439.5 340 67.9
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 3.0e-121 439.1 300 72.7
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.5e-120 436.8 329 67.5
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 2.0e-120 436.4 303 70.3
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 3.3e-120 435.6 328 67.7
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 7.4e-120 434.5 337 68.8
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 7.4e-120 434.5 340 65.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 1.1e-118 430.6 232 89.2
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 9.1e-118 427.6 293 71.0
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 3.5e-117 425.6 307 68.4
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 3.5e-117 425.6 306 69.6
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.2e-116 422.9 270 73.7
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.9e-115 419.9 329 65.0
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 9.1e-110 401.0 233 80.3
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.5e-109 399.1 216 85.6
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 5.9e-109 398.3 294 68.0
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 2.3e-105 386.3 307 62.9
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 6.1e-98 361.7 322 59.6
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 5.6e-91 338.6 243 64.2
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.6e-90 337.0 300 57.0
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.0e-89 334.3 183 86.9
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.0e-89 334.3 183 86.9
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 3.7e-87 325.9 245 68.2
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 9.5e-83 311.2 297 53.2
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 5.2e-81 305.4 196 76.0
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 8.9e-73 278.1 201 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 1.3e-68 264.2 189 65.6
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 5.6e-67 258.8 149 83.2
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 1.9e-62 243.8 201 60.7
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 5.3e-41 172.6 148 59.5
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 1.5e-40 171.0 167 49.7
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 2.4e-33 147.1 78 85.9
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 1.1e-25 121.7 145 47.6
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 6.1e-21 105.9 59 83.1
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 7.0e-09 65.9 52 63.5
C02p13650 Brassica napus HOM05D003204 ORTHO05D003566 1.7e-07 61.2 181 33.1
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 2.9e-07 60.5 161 30.4
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 5.0e-07 59.7 164 29.9
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 1.1e-06 58.5 161 29.2
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 2.5e-06 57.4 167 30.5
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 2.5e-06 57.4 167 30.5


User provided reference genes

Program Settings