Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 4.1e-181 637.9 308 100.0
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 4.1e-181 637.9 308 100.0
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 4.1e-181 637.9 308 100.0
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.1e-145 519.2 308 79.5
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 1.5e-135 486.5 316 75.0
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 7.5e-135 484.2 308 76.0
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 4.1e-133 478.4 311 75.2
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 2.7e-132 475.7 311 74.6
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 3.5e-132 475.3 311 74.6
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 7.8e-132 474.2 308 75.6
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 7.8e-132 474.2 308 75.6
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.1e-130 470.3 307 75.6
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 7.3e-130 467.6 304 74.0
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 2.1e-129 466.1 310 73.9
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 2.8e-129 465.7 313 71.9
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 3.6e-129 465.3 304 73.0
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 5.8e-127 458.0 318 70.8
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 3.7e-126 455.3 305 72.8
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 4.9e-126 454.9 307 71.3
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 7.1e-125 451.1 323 69.0
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 9.2e-125 450.7 313 69.6
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 7.8e-124 447.6 305 71.5
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 1.0e-123 447.2 300 71.3
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 1.0e-123 447.2 313 69.6
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 3.0e-123 445.7 313 70.0
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 2.5e-122 442.6 309 68.9
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 9.5e-122 440.7 308 68.5
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 2.1e-121 439.5 275 73.5
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 8.9e-120 434.1 309 67.6
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 2.6e-119 432.6 312 67.0
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.4e-119 432.2 280 71.1
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 4.4e-119 431.8 310 69.0
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 5.8e-119 431.4 312 67.0
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 5.8e-119 431.4 312 66.7
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 9.9e-119 430.6 306 69.6
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 6.4e-118 427.9 307 67.1
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 2.4e-117 426.0 317 65.3
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 3.2e-117 425.6 307 65.8
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 4.1e-117 425.2 306 69.0
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 5.4e-117 424.9 307 66.4
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 2.7e-116 422.5 298 70.8
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 2.7e-116 422.5 305 67.9
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 3.5e-116 422.2 309 66.0
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 6.0e-116 421.4 305 64.3
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 6.0e-116 421.4 304 66.8
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 7.8e-116 421.0 308 66.9
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 2.3e-115 419.5 292 66.1
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 3.0e-115 419.1 310 67.1
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 8.7e-115 417.5 303 66.0
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 1.5e-114 416.8 300 63.3
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 1.9e-114 416.4 295 66.4
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 1.9e-114 416.4 300 65.0
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 3.3e-114 415.6 292 66.4
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 3.3e-114 415.6 279 70.6
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 5.6e-114 414.8 284 66.9
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 5.6e-114 414.8 316 64.9
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 2.1e-113 412.9 310 62.6
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 2.1e-113 412.9 293 65.2
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 6.2e-113 411.4 240 81.2
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 1.4e-112 410.2 308 64.6
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 1.4e-112 410.2 314 63.4
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 2.4e-112 409.5 304 66.4
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 3.1e-112 409.1 303 63.4
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 3.1e-112 409.1 293 63.8
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 5.2e-112 408.3 301 66.8
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 6.9e-112 407.9 312 61.9
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 1.2e-111 407.1 320 62.8
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.5e-111 406.8 308 64.0
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.6e-111 406.0 322 62.1
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 3.4e-111 405.6 308 63.3
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 4.4e-111 405.2 323 64.1
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 5.8e-111 404.8 263 71.5
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 9.9e-111 404.1 300 64.3
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 1.3e-110 403.7 308 64.0
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 1.3e-110 403.7 308 64.0
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-110 403.7 308 64.0
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.7e-110 403.3 308 63.0
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 6.4e-110 401.4 305 64.9
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 6.4e-110 401.4 305 64.6
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.4e-109 400.2 308 61.7
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.9e-109 399.8 326 60.7
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.9e-109 399.8 314 62.1
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 3.2e-109 399.1 326 62.9
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 3.2e-109 399.1 309 62.1
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 5.4e-109 398.3 305 63.9
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 9.3e-109 397.5 288 64.2
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 9.3e-109 397.5 309 63.1
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 2.3e-107 392.9 287 66.6
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.1e-105 386.3 323 59.1
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 2.8e-105 386.0 246 71.5
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 8.1e-105 384.4 261 67.0
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 1.8e-104 383.3 336 57.1
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 6.9e-104 381.3 304 61.2
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 5.8e-103 378.3 305 60.7
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.1e-101 374.0 219 76.3
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.4e-101 373.6 280 63.6
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 2.4e-101 372.9 295 60.3
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 5.4e-101 371.7 231 75.8
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 9.3e-101 370.9 309 59.2
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 2.7e-100 369.4 252 68.3
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 1.3e-99 367.1 235 73.6
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 3.9e-99 365.5 305 60.0
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 1.5e-98 363.6 276 60.5
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 3.3e-98 362.5 302 58.3
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 5.6e-98 361.7 258 65.9
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 9.6e-98 360.9 299 56.9
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 2.4e-96 356.3 305 56.7
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 3.1e-96 355.9 306 56.5
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 3.4e-95 352.4 232 66.8
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 8.4e-94 347.8 246 64.6
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 2.4e-93 346.3 278 59.0
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 3.5e-92 342.4 302 55.3
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 6.0e-92 341.7 310 53.9
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 1.0e-91 340.9 198 78.3
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.0e-91 340.9 314 54.5
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 1.3e-91 340.5 211 74.4
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 1.8e-91 340.1 285 56.1
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 4.3e-90 335.5 302 54.0
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 4.3e-90 335.5 303 55.1
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 4.3e-90 335.5 230 64.8
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 5.6e-90 335.1 301 54.2
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 7.4e-90 334.7 301 54.2
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 1.6e-89 333.6 313 53.0
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 2.1e-89 333.2 297 56.9
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 4.8e-89 332.0 229 65.9
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 6.2e-89 331.6 259 58.3
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 1.1e-88 330.9 233 66.1
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 6.9e-88 328.2 244 62.3
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 1.2e-87 327.4 263 56.3
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 1.3e-86 323.9 297 56.2
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 1.3e-86 323.9 297 56.2
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 1.3e-86 323.9 297 56.2
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 3.8e-86 322.4 297 56.2
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.1e-85 320.9 196 75.5
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 1.2e-84 317.4 298 55.0
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 6.0e-84 315.1 297 54.5
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 6.0e-84 315.1 158 93.0
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 5.1e-83 312.0 237 65.4
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.3e-82 308.9 305 54.1
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 1.6e-81 307.0 228 61.0
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 1.5e-79 300.4 231 60.2
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 6.7e-75 285.0 230 54.8
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.3e-73 280.8 268 56.0
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 6.9e-72 275.0 300 51.0
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 1.2e-71 274.2 301 47.8
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 5.9e-71 271.9 199 63.3
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 5.9e-71 271.9 229 54.1
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.0e-70 271.2 217 58.5
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.9e-70 269.6 219 56.6
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 1.2e-68 264.2 261 51.3
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 3.0e-67 259.6 238 51.7
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.9e-67 259.2 231 51.9
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 8.8e-67 258.1 230 52.6
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 9.7e-66 254.6 177 71.8
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 2.2e-65 253.4 229 51.1
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 2.8e-65 253.1 228 50.0
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 4.5e-63 245.7 227 49.8
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 2.9e-62 243.0 240 47.9
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 1.8e-59 233.8 246 46.7
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 2.3e-59 233.4 154 64.9
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 2.0e-58 230.3 173 68.2
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 1.1e-56 224.6 222 48.2
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 2.4e-56 223.4 197 55.8
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 1.9e-53 213.8 191 50.8
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 8.8e-51 204.9 244 42.2
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.2e-50 204.5 130 70.0
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 5.7e-50 202.2 239 45.2
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 2.7e-47 193.4 317 35.3
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 2.7e-47 193.4 153 58.2
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 2.5e-45 186.8 220 41.4
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 7.0e-40 168.7 109 68.8
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 8.0e-36 155.2 96 65.6
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 3.4e-34 149.8 87 75.9
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 5.2e-27 125.9 92 60.9
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 1.2e-15 88.2 49 77.6
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 4.6e-15 86.3 74 51.4
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 5.2e-11 72.8 95 41.1
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 1.6e-07 61.2 43 62.8


User provided reference genes

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