Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 2.1e-263 911.8 451 100.0
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.9e-252 874.8 454 96.5
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.3e-199 699.9 454 77.5
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 1.9e-195 686.0 465 75.7
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 8.3e-183 644.0 456 70.4
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 9.2e-182 640.6 456 70.4
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.7e-181 639.0 469 67.8
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.0e-180 637.1 459 69.5
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.9e-180 635.2 459 69.3
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 1.5e-179 633.3 467 67.5
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 9.5e-179 630.6 466 68.7
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 2.4e-174 615.9 461 67.9
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 2.4e-174 615.9 455 69.2
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.7e-173 612.5 436 70.0
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 6.0e-173 611.3 471 65.6
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.0e-172 610.5 461 67.9
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 2.3e-172 609.4 451 68.5
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 5.1e-172 608.2 474 65.8
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 6.6e-172 607.8 456 67.5
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 8.6e-172 607.4 474 65.0
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.1e-171 607.1 464 67.2
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.6e-170 603.2 460 67.0
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 5.8e-168 594.7 460 66.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 4.9e-167 591.7 460 65.0
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 4.9e-167 591.7 461 65.5
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 6.4e-167 591.3 471 64.8
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 8.4e-167 590.9 462 66.9
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 1.1e-166 590.5 462 66.7
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 2.4e-166 589.3 456 67.1
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 5.4e-166 588.2 475 63.6
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 9.2e-166 587.4 460 64.1
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 1.2e-165 587.0 460 64.3
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 1.2e-165 587.0 462 65.2
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.1e-165 586.3 457 67.0
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 7.8e-165 584.3 460 64.8
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 2.3e-164 582.8 465 63.7
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.9e-164 582.0 462 66.0
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 3.1e-161 572.4 473 63.8
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.2e-161 571.6 337 83.4
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 9.0e-161 570.9 457 62.6
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.0e-160 569.7 458 63.1
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 4.9e-159 565.1 459 62.7
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 6.4e-159 564.7 501 58.9
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 7.1e-158 561.2 469 61.8
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 7.1e-158 561.2 446 64.1
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.2e-157 560.5 561 54.5
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 2.1e-157 559.7 459 62.3
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 6.0e-157 558.1 398 69.8
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 2.3e-156 556.2 459 62.3
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.9e-156 555.4 459 61.7
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 8.7e-156 554.3 430 64.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 1.9e-155 553.1 477 59.5
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.3e-155 552.4 467 61.5
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 3.3e-155 552.4 477 59.5
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 5.6e-155 551.6 461 62.0
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.6e-155 551.6 466 61.6
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.3e-155 551.2 464 61.4
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 1.6e-154 550.1 489 58.7
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 2.1e-154 549.7 459 62.1
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 2.1e-154 549.7 479 58.5
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 4.8e-154 548.5 459 60.8
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 6.2e-154 548.1 464 59.7
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 2.4e-153 546.2 460 60.0
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 2.4e-153 546.2 458 61.1
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 4.5e-152 542.0 478 60.0
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 5.8e-152 541.6 456 60.7
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 1.3e-151 540.4 468 58.5
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.9e-151 539.3 457 61.1
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 2.9e-151 539.3 477 59.1
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 3.8e-151 538.9 477 58.7
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 4.2e-150 535.4 466 59.9
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.2e-149 533.9 426 63.1
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 2.7e-149 532.7 461 60.5
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.3e-148 530.4 502 56.2
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.8e-148 530.0 479 59.5
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 1.9e-147 526.6 477 59.7
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 1.9e-147 526.6 519 55.9
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.8e-145 520.0 471 57.5
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 3.1e-145 519.2 368 70.7
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 5.3e-145 518.5 470 58.1
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 2.0e-144 516.5 388 67.3
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 5.8e-144 515.0 461 57.0
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.7e-143 513.5 460 56.3
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 3.8e-143 512.3 466 58.4
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.3e-139 499.2 362 68.5
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 4.3e-139 498.8 449 58.1
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 2.4e-137 493.0 468 54.5
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 9.0e-137 491.1 376 64.6
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 7.1e-134 481.5 432 56.5
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 2.2e-130 469.9 444 54.7
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.1e-129 467.6 495 51.3
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 4.5e-128 462.2 475 54.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 2.1e-125 453.4 424 54.5
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.2e-117 427.6 321 65.4
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 2.6e-115 419.9 403 54.1
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 2.2e-114 416.8 350 61.4
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 2.2e-114 416.8 350 61.4
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.6e-109 400.6 468 51.5
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 2.8e-106 389.8 455 47.5
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.0e-103 381.3 454 44.7
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 4.8e-98 362.5 285 62.8
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 6.3e-98 362.1 350 54.3
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.9e-95 353.2 230 74.3
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.3e-90 337.8 235 71.5
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.2e-90 337.0 258 64.0
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 9.1e-89 331.6 349 49.0
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 1.3e-87 327.8 441 46.7
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.7e-82 310.8 461 38.8
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 8.0e-77 292.0 374 47.1
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 8.9e-76 288.5 448 40.0
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 3.3e-70 270.0 350 43.1
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.1e-68 263.5 235 59.1
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 2.6e-59 233.8 179 68.2
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 2.1e-56 224.2 293 42.7
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.7e-56 223.8 225 56.0
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 4.0e-52 209.9 180 59.4
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 8.4e-50 202.2 193 56.0
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 6.6e-47 192.6 160 63.1
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 6.6e-47 192.6 160 63.1
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.0e-44 182.2 137 62.8
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 3.2e-41 173.7 445 29.4
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.6e-40 171.4 147 57.8
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.3e-38 162.5 106 71.7
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 3.8e-34 150.2 173 46.8
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.1e-33 148.7 115 64.3
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 8.7e-23 112.5 230 33.0
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 6.2e-21 106.3 67 74.6
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-18 98.6 105 49.5
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.5e-14 85.1 55 72.7
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.5e-14 84.3 55 72.7
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 2.8e-13 80.9 106 44.3
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 4.8e-13 80.1 83 54.2


User provided reference genes

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