Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p020848 Quercus lobata HOM05D000728 ORTHO05D001586 4.4e-36 154.1 76 100.0
QL06p020826 Quercus lobata HOM05D000728 ORTHO05D001586 3.4e-28 127.9 68 92.6
Cfa014776 Carpinus fangiana HOM05D000728 ORTHO05D001586 1.2e-12 76.3 64 57.8
Haze_11451 Corylus avellana HOM05D000728 ORTHO05D001586 2.6e-12 75.1 64 56.2
Thhalv10007184m.g Eutrema salsugineum HOM05D000728 ORTHO05D001586 1.3e-08 62.8 75 41.3
Dinv27107 Davidia involucrata HOM05D000728 ORTHO05D001586 1.7e-08 62.4 75 44.0
CAN.G1487.2 Capsicum annuum HOM05D000728 ORTHO05D001586 3.9e-08 61.2 61 47.5
Oeu052077.3 Olea europaea HOM05D000728 ORTHO05D001586 6.6e-08 60.5 72 44.4
SGA_v2.0_scaffold67G22698 Striga asiatica HOM05D000728 ORTHO05D001586 6.6e-08 60.5 61 45.9
Solyc06g083760.3 Solanum lycopersicum HOM05D000728 ORTHO05D001586 8.7e-08 60.1 69 43.5
EL10Ac7g17673 Beta vulgaris HOM05D000728 ORTHO05D001586 1.1e-07 59.7 80 41.2
CSS0037082 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.1e-07 59.7 67 49.3
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 1.1e-07 59.7 61 45.9
Migut.O00088 Erythranthe guttata HOM05D000728 ORTHO05D001586 1.5e-07 59.3 67 40.3
Nitab4.5_0000845g0130 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.5e-07 59.3 61 47.5
Nitab4.5_0003342g0010 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.5e-07 59.3 61 47.5
Psat6g062880 Pisum sativum HOM05D000728 ORTHO05D001586 1.5e-07 59.3 68 45.6
arahy.Tifrunner.gnm1.ann1.68RZIY Arachis hypogaea HOM05D000728 ORTHO05D001586 1.9e-07 58.9 69 46.4
arahy.Tifrunner.gnm1.ann1.W86IKX Arachis hypogaea HOM05D000728 ORTHO05D001586 1.9e-07 58.9 69 46.4
Ciclev10018896m.g Citrus clementina HOM05D000728 ORTHO05D001586 1.9e-07 58.9 68 47.1
Nitab4.5_0003167g0090 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.9e-07 58.9 61 45.9
Sopen06g035170 Solanum pennellii HOM05D000728 ORTHO05D001586 1.9e-07 58.9 69 43.5
Ca_10022_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 2.5e-07 58.5 63 44.4
Ca_29586_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 2.5e-07 58.5 63 44.4
ECA247G3020 Erigeron canadensis HOM05D000728 ORTHO05D001586 2.5e-07 58.5 74 43.2
Peaxi162Scf00517g00031 Petunia axillaris HOM05D000728 ORTHO05D001586 2.5e-07 58.5 65 47.7
Rhsim01G0261000 Rhododendron simsii HOM05D000728 ORTHO05D001586 2.5e-07 58.5 59 45.8
Ah.02g118320 Amaranthus hybridus HOM05D000728 ORTHO05D001586 3.3e-07 58.2 57 47.4
arahy.Tifrunner.gnm1.ann1.ZB9HG3 Arachis hypogaea HOM05D000728 ORTHO05D001586 3.3e-07 58.2 68 39.7
CSS0025855 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 3.3e-07 58.2 67 46.3
Ca_08736_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 3.3e-07 58.2 62 46.8
DCAR_004684 Daucus carota HOM05D000728 ORTHO05D001586 3.3e-07 58.2 59 47.5
Glyma.10G165500 Glycine max HOM05D000728 ORTHO05D001586 3.3e-07 58.2 62 45.2
Oeu028901.1 Olea europaea HOM05D000728 ORTHO05D001586 3.3e-07 58.2 61 44.3
Phvul.001G164300 Phaseolus vulgaris HOM05D000728 ORTHO05D001586 3.3e-07 58.2 61 45.9
arahy.Tifrunner.gnm1.ann1.6R0DDZ Arachis hypogaea HOM05D000728 ORTHO05D001586 4.3e-07 57.8 61 44.3
DCAR_024288 Daucus carota HOM05D000728 ORTHO05D001586 4.3e-07 57.8 75 44.0
Migut.D00470 Erythranthe guttata HOM05D000728 ORTHO05D001586 4.3e-07 57.8 69 39.1
Hma1.2p1_3058F.1_g332170 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 4.3e-07 57.8 63 44.4
Lalb_Chr06g0170701 Lupinus albus HOM05D000728 ORTHO05D001586 4.3e-07 57.8 69 44.9
Peaxi162Scf00033g03023 Petunia axillaris HOM05D000728 ORTHO05D001586 4.3e-07 57.8 60 43.3
EL10Ac4g09749 Beta vulgaris HOM05D000728 ORTHO05D001586 5.6e-07 57.4 57 47.4
CSS0035527 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 5.6e-07 57.4 54 50.0
ClCG11G010430 Citrullus lanatus HOM05D000728 ORTHO05D001586 5.6e-07 57.4 61 42.6
Cc01_g17860 Coffea canephora HOM05D000728 ORTHO05D001586 5.6e-07 57.4 61 44.3
MELO3C008647.2 Cucumis melo HOM05D000728 ORTHO05D001586 5.6e-07 57.4 61 39.3
Nitab4.5_0002538g0040 Nicotiana tabacum HOM05D000728 ORTHO05D001586 5.6e-07 57.4 61 44.3
MSTRG.9864 Avicennia marina HOM05D000728 ORTHO05D001586 7.3e-07 57.0 63 39.7
Ca_09651_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 7.3e-07 57.0 62 43.5
DCAR_012580 Daucus carota HOM05D000728 ORTHO05D001586 7.3e-07 57.0 61 42.6
Migut.N02227 Erythranthe guttata HOM05D000728 ORTHO05D001586 7.3e-07 57.0 69 40.6
FvH4_5g31170 Fragaria vesca HOM05D000728 ORTHO05D001586 7.3e-07 57.0 68 41.2
Medtr1g069570 Medicago truncatula HOM05D000728 ORTHO05D001586 7.3e-07 57.0 66 40.9
Potri.002G257400 Populus trichocarpa HOM05D000728 ORTHO05D001586 7.3e-07 57.0 76 40.8
SGA_v2.0_scaffold1G00645 Striga asiatica HOM05D000728 ORTHO05D001586 7.3e-07 57.0 69 42.0
arahy.Tifrunner.gnm1.ann1.K3KASK Arachis hypogaea HOM05D000728 ORTHO05D001586 9.6e-07 56.6 73 39.7
arahy.Tifrunner.gnm1.ann1.YP76SE Arachis hypogaea HOM05D000728 ORTHO05D001586 9.6e-07 56.6 73 39.7
Glyma.19G167900 Glycine max HOM05D000728 ORTHO05D001586 9.6e-07 56.6 65 44.6
Lj3A649G56 Lonicera japonica HOM05D000728 ORTHO05D001586 9.6e-07 56.6 54 50.0
PGR004G1360 Punica granatum HOM05D000728 ORTHO05D001586 9.6e-07 56.6 67 43.3
PGR004G2531 Punica granatum HOM05D000728 ORTHO05D001586 9.6e-07 56.6 62 41.9
THA.LOC104801129 Tarenaya hassleriana HOM05D000728 ORTHO05D001586 9.6e-07 56.6 73 43.8
MSTRG.12519 Avicennia marina HOM05D000728 ORTHO05D001586 1.2e-06 56.2 66 42.4
CSS0045777 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.2e-06 56.2 61 45.9
CAN.G941.29 Capsicum annuum HOM05D000728 ORTHO05D001586 1.2e-06 56.2 65 41.5
Cc03_g06230 Coffea canephora HOM05D000728 ORTHO05D001586 1.2e-06 56.2 63 41.3
Glyma.03G166800 Glycine max HOM05D000728 ORTHO05D001586 1.2e-06 56.2 65 44.6
Hma1.2p1_1336F.1_g276470 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 1.2e-06 56.2 63 42.9
Oeu039654.1 Olea europaea HOM05D000728 ORTHO05D001586 1.2e-06 56.2 61 42.6
Peaxi162Scf00043g02925 Petunia axillaris HOM05D000728 ORTHO05D001586 1.2e-06 56.2 64 45.3
PGR044G1458 Punica granatum HOM05D000728 ORTHO05D001586 1.2e-06 56.2 68 45.6
Sc17g0002720 Simmondsia chinensis HOM05D000728 ORTHO05D001586 1.2e-06 56.2 59 44.1
CSS0013114 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.6e-06 55.8 72 43.1
CSS0020820 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.6e-06 55.8 72 43.1
AUR62000625 Chenopodium quinoa HOM05D000728 ORTHO05D001586 1.6e-06 55.8 58 44.8
Manes.08G140400 Manihot esculenta HOM05D000728 ORTHO05D001586 1.6e-06 55.8 67 43.3
Potri.013G048100 Populus trichocarpa HOM05D000728 ORTHO05D001586 1.6e-06 55.8 68 44.1
Solyc09g072890.2 Solanum lycopersicum HOM05D000728 ORTHO05D001586 1.6e-06 55.8 61 44.3
Sopen09g028690 Solanum pennellii HOM05D000728 ORTHO05D001586 1.6e-06 55.8 61 44.3
Sopen09g028710 Solanum pennellii HOM05D000728 ORTHO05D001586 1.6e-06 55.8 61 44.3
Eucgr.K01433 Eucalyptus grandis HOM05D000728 ORTHO05D001586 2.1e-06 55.5 68 41.2
Lj1g0018773 Lotus japonicus HOM05D000728 ORTHO05D001586 2.1e-06 55.5 61 44.3
Nitab4.5_0009671g0030 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.1e-06 55.5 63 39.7
PSO017G3969 Papaver somniferum HOM05D000728 ORTHO05D001586 2.1e-06 55.5 62 40.3
Rhsim13G0039700 Rhododendron simsii HOM05D000728 ORTHO05D001586 2.1e-06 55.5 61 44.3
TWI18G0707 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 2.1e-06 55.5 62 43.5
CSS0031500 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 2.8e-06 55.1 61 42.6
Lj5g0023081 Lotus japonicus HOM05D000728 ORTHO05D001586 2.8e-06 55.1 61 44.3
Psat3g055160 Pisum sativum HOM05D000728 ORTHO05D001586 2.8e-06 55.1 62 41.9
Thecc.05G268100 Theobroma cacao HOM05D000728 ORTHO05D001586 2.8e-06 55.1 61 44.3
TAR633G1057 Trochodendron aralioides HOM05D000728 ORTHO05D001586 2.8e-06 55.1 59 44.1
VMungo1383G1125 Vigna mungo HOM05D000728 ORTHO05D001586 2.8e-06 55.1 61 42.6
HanXRQChr10g0280661 Helianthus annuus HOM05D000728 ORTHO05D001586 3.6e-06 54.7 61 42.6
HanXRQChr15g0468241 Helianthus annuus HOM05D000728 ORTHO05D001586 3.6e-06 54.7 68 42.6
Hma1.2p1_0112F.1_g054660 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 3.6e-06 54.7 54 50.0
Medtr7g098390 Medicago truncatula HOM05D000728 ORTHO05D001586 3.6e-06 54.7 61 44.3
Nitab4.5_0002751g0030 Nicotiana tabacum HOM05D000728 ORTHO05D001586 3.6e-06 54.7 63 42.9
PGSC0003DMG400017150 Solanum tuberosum HOM05D000728 ORTHO05D001586 3.6e-06 54.7 61 42.6
Lsat_1_v5_gn_9_11421 Lactuca sativa HOM05D000728 ORTHO05D001586 4.7e-06 54.3 61 41.0
MBI10_g30715_MAGBIO Magnolia biondii HOM05D000728 ORTHO05D001586 4.7e-06 54.3 61 41.0
Manes.13G040300 Manihot esculenta HOM05D000728 ORTHO05D001586 4.7e-06 54.3 68 44.1
PSO675G3487 Papaver somniferum HOM05D000728 ORTHO05D001586 4.7e-06 54.3 58 44.8
TAR365G0137 Trochodendron aralioides HOM05D000728 ORTHO05D001586 4.7e-06 54.3 72 40.3
vmacro02707 Vaccinium macrocarpon HOM05D000728 ORTHO05D001586 4.7e-06 54.3 58 44.8
MSTRG.18349 Avicennia marina HOM05D000728 ORTHO05D001586 6.2e-06 53.9 56 44.6
Haze_24694 Corylus avellana HOM05D000728 ORTHO05D001586 6.2e-06 53.9 67 41.8
Lj1C73G4 Lonicera japonica HOM05D000728 ORTHO05D001586 6.2e-06 53.9 78 37.2
Lj2A44T78 Lonicera japonica HOM05D000728 ORTHO05D001586 6.2e-06 53.9 56 46.4
MD00G1060700 Malus domestica HOM05D000728 ORTHO05D001586 6.2e-06 53.9 61 42.6
PSO339G3977 Papaver somniferum HOM05D000728 ORTHO05D001586 6.2e-06 53.9 59 40.7
Potri.014G192500 Populus trichocarpa HOM05D000728 ORTHO05D001586 6.2e-06 53.9 61 39.3
Hund18282 Selenicereus undatus HOM05D000728 ORTHO05D001586 6.2e-06 53.9 70 38.6
TWI12G1257 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 6.2e-06 53.9 57 45.6
ECA238G1878 Erigeron canadensis HOM05D000728 ORTHO05D001586 8.1e-06 53.5 58 44.8
Manes.12G036100 Manihot esculenta HOM05D000728 ORTHO05D001586 8.1e-06 53.5 68 44.1
Psat6g143800 Pisum sativum HOM05D000728 ORTHO05D001586 8.1e-06 53.5 52 48.1
Prupe.8G216300 Prunus persica HOM05D000728 ORTHO05D001586 8.1e-06 53.5 61 42.6
unitig_60.g25730 Utricularia gibba HOM05D000728 ORTHO05D001586 8.1e-06 53.5 62 38.7


User provided reference genes

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