Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p009358 Quercus lobata HOM05D001406 ORTHO05D006300 9.3e-129 463.8 272 100.0
QL06p009360 Quercus lobata HOM05D001406 ORTHO05D006300 9.3e-129 463.8 272 100.0
QL06p009115 Quercus lobata HOM05D001406 ORTHO05D006300 2.0e-123 446.0 274 93.1
CiPaw.01G147700 Carya illinoinensis HOM05D001406 ORTHO05D006300 1.6e-104 383.3 273 78.8
Cfa015397 Carpinus fangiana HOM05D001406 ORTHO05D006300 1.4e-100 370.2 274 77.7
Haze_01188 Corylus avellana HOM05D001406 ORTHO05D006300 1.7e-98 363.2 275 77.1
MD16G1167900 Malus domestica HOM05D001406 ORTHO05D006300 6.3e-93 344.7 274 68.6
Dinv44369 Davidia involucrata HOM05D001406 ORTHO05D006300 4.5e-91 338.6 274 70.4
FvH4_4g18310 Fragaria vesca HOM05D001406 ORTHO05D006300 7.7e-91 337.8 274 67.9
FAN12G4194 Fragaria x ananassa HOM05D001406 ORTHO05D006300 2.2e-90 336.3 274 67.9
FAN12G0087 Fragaria x ananassa HOM05D001406 ORTHO05D006300 6.5e-90 334.7 274 67.5
Lalb_Chr18g0051631 Lupinus albus HOM05D001406 ORTHO05D006300 7.2e-89 331.3 274 67.2
RcHm_v2.0_Chr4g0422791 Rosa chinensis HOM05D001406 ORTHO05D006300 9.4e-89 330.9 274 66.1
Hma1.2p1_1185F.1_g265020 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 1.2e-88 330.5 274 70.8
Ca_01929_v3 Cicer arietinum L. HOM05D001406 ORTHO05D006300 1.0e-87 327.4 278 68.7
CANSAT78G1952 Cannabis sativa HOM05D001406 ORTHO05D006300 1.5e-86 323.6 273 70.3
Duzib212G0336 Durio zibethinus HOM05D001406 ORTHO05D006300 2.0e-86 323.2 274 67.5
Thecc.04G286100 Theobroma cacao HOM05D001406 ORTHO05D006300 3.3e-86 322.4 275 66.9
Medtr2g436590 Medicago truncatula HOM05D001406 ORTHO05D006300 1.7e-85 320.1 278 67.3
Hund20543 Selenicereus undatus HOM05D001406 ORTHO05D006300 2.8e-85 319.3 272 65.8
arahy.Tifrunner.gnm1.ann1.4JB89L Arachis hypogaea HOM05D001406 ORTHO05D006300 3.7e-85 318.9 280 65.7
Actinidia00013 Actinidia chinensis HOM05D001406 ORTHO05D006300 4.8e-85 318.5 276 70.7
Phvul.009G248800 Phaseolus vulgaris HOM05D001406 ORTHO05D006300 4.8e-85 318.5 279 66.3
Glyma.15G149000 Glycine max HOM05D001406 ORTHO05D006300 6.3e-85 318.2 276 67.0
CSS0049595 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D006300 8.2e-85 317.8 276 70.3
TAR370G0006 Trochodendron aralioides HOM05D001406 ORTHO05D006300 8.2e-85 317.8 279 67.7
Lj6g0027272 Lotus japonicus HOM05D001406 ORTHO05D006300 1.4e-84 317.0 278 65.8
Sopen12g034190 Solanum pennellii HOM05D001406 ORTHO05D006300 2.4e-84 316.2 275 65.1
Lj6C678T4 Lonicera japonica HOM05D001406 ORTHO05D006300 3.1e-84 315.8 273 67.0
GSVIVG01017722001 Vitis vinifera HOM05D001406 ORTHO05D006300 5.3e-84 315.1 275 67.3
Nn4g25794 Nelumbo nucifera HOM05D001406 ORTHO05D006300 9.1e-84 314.3 279 62.0
Psat1g154920 Pisum sativum HOM05D001406 ORTHO05D006300 9.1e-84 314.3 278 64.4
CAN.G484.37 Capsicum annuum HOM05D001406 ORTHO05D006300 1.2e-83 313.9 275 64.7
Potri.010G013300 Populus trichocarpa HOM05D001406 ORTHO05D006300 1.6e-83 313.5 274 65.0
Ah.04g153610 Amaranthus hybridus HOM05D001406 ORTHO05D006300 2.0e-83 313.2 273 62.6
PGSC0003DMG401004707 Solanum tuberosum HOM05D001406 ORTHO05D006300 2.0e-83 313.2 275 64.4
Cpa.g.sc16.181 Carica papaya HOM05D001406 ORTHO05D006300 1.0e-82 310.8 274 68.2
Eucgr.C00460 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.7e-82 310.1 276 63.8
TWI53G1101 Tripterygium wilfordii HOM05D001406 ORTHO05D006300 1.7e-82 310.1 281 66.2
MSTRG.3907 Avicennia marina HOM05D001406 ORTHO05D006300 5.0e-82 308.5 275 62.5
Sabra10G0008500 Salix brachista HOM05D001406 ORTHO05D006300 6.5e-82 308.1 274 64.2
COL.COLO4_13851 Corchorus olitorius HOM05D001406 ORTHO05D006300 8.5e-82 307.8 274 65.3
arahy.Tifrunner.gnm1.ann1.Q4RDUH Arachis hypogaea HOM05D001406 ORTHO05D006300 1.1e-81 307.4 304 60.9
Nitab4.5_0000570g0200 Nicotiana tabacum HOM05D001406 ORTHO05D006300 1.1e-81 307.4 273 63.4
TPR.G26890 Trifolium pratense HOM05D001406 ORTHO05D006300 1.1e-81 307.4 278 64.0
Sed0021428 Sechium edule HOM05D001406 ORTHO05D006300 7.2e-81 304.7 273 63.0
Rhsim02G0008400 Rhododendron simsii HOM05D001406 ORTHO05D006300 9.4e-81 304.3 293 64.8
Cc03_g01780 Coffea canephora HOM05D001406 ORTHO05D006300 2.1e-80 303.1 274 64.2
CsaV3_UNG067570 Cucumis sativus L. HOM05D001406 ORTHO05D006300 2.1e-80 303.1 273 63.0
CsaV3_UNG088690 Cucumis sativus L. HOM05D001406 ORTHO05D006300 2.1e-80 303.1 273 63.0
vmacro15227 Vaccinium macrocarpon HOM05D001406 ORTHO05D006300 2.7e-80 302.8 300 64.7
AUR62034308 Chenopodium quinoa HOM05D001406 ORTHO05D006300 4.7e-80 302.0 273 62.6
AUR62025017 Chenopodium quinoa HOM05D001406 ORTHO05D006300 8.0e-80 301.2 273 62.6
Lj6g0019990 Lotus japonicus HOM05D001406 ORTHO05D006300 1.8e-79 300.1 281 62.6
VMungo1309G1537 Vigna mungo HOM05D001406 ORTHO05D006300 1.8e-79 300.1 279 64.2
Thhalv10024228m.g Eutrema salsugineum HOM05D001406 ORTHO05D006300 5.2e-79 298.5 274 63.9
Solyc12g099510.3 Solanum lycopersicum HOM05D001406 ORTHO05D006300 8.8e-79 297.7 266 65.0
CARHR290420 Cardamine hirsuta HOM05D001406 ORTHO05D006300 2.0e-78 296.6 274 63.9
Gohir.A10G164700 Gossypium hirsutum HOM05D001406 ORTHO05D006300 5.7e-78 295.0 275 62.9
Gohir.D10G170900 Gossypium hirsutum HOM05D001406 ORTHO05D006300 5.7e-78 295.0 275 62.5
Gorai.011G191000 Gossypium raimondii HOM05D001406 ORTHO05D006300 5.7e-78 295.0 275 62.5
Sp7g14340 Schrenkiella parvula HOM05D001406 ORTHO05D006300 1.7e-77 293.5 274 62.4
AT4G15890 Arabidopsis thaliana HOM05D001406 ORTHO05D006300 4.8e-77 292.0 274 63.5
BcaC06g33438 Brassica carinata HOM05D001406 ORTHO05D006300 8.3e-77 291.2 275 61.5
BolC7t45276H Brassica oleracea HOM05D001406 ORTHO05D006300 8.3e-77 291.2 275 61.5
Eucgr.C00455 Eucalyptus grandis HOM05D001406 ORTHO05D006300 8.3e-77 291.2 276 61.2
EL10Ac3g06610 Beta vulgaris HOM05D001406 ORTHO05D006300 1.8e-76 290.0 273 61.2
Migut.G00150 Erythranthe guttata HOM05D001406 ORTHO05D006300 4.1e-76 288.9 276 61.2
MBI19_g25352_MAGBIO Magnolia biondii HOM05D001406 ORTHO05D006300 4.1e-76 288.9 283 60.1
A03p49440 Brassica napus HOM05D001406 ORTHO05D006300 7.0e-76 288.1 273 61.2
BraA03t14045Z Brassica rapa HOM05D001406 ORTHO05D006300 7.0e-76 288.1 273 61.2
Eucgr.C00332 Eucalyptus grandis HOM05D001406 ORTHO05D006300 7.0e-76 288.1 276 60.5
Glyma.09G044100 Glycine max HOM05D001406 ORTHO05D006300 9.1e-76 287.7 276 62.3
AL7G39380 Arabidopsis lyrata HOM05D001406 ORTHO05D006300 1.2e-75 287.3 274 62.8
Aa31LG10G6250 Aethionema arabicum HOM05D001406 ORTHO05D006300 2.0e-75 286.6 276 61.2
Carub.0007s2577 Capsella rubella HOM05D001406 ORTHO05D006300 2.0e-75 286.6 274 61.3
Aqoxy2G02952 Aquilegia oxysepala HOM05D001406 ORTHO05D006300 3.5e-75 285.8 280 60.7
BcaC06g32972 Brassica carinata HOM05D001406 ORTHO05D006300 7.7e-75 284.6 274 60.9
Nitab4.5_0003466g0080 Nicotiana tabacum HOM05D001406 ORTHO05D006300 1.9e-73 280.0 251 62.9
MELO3C035190.2 Cucumis melo HOM05D001406 ORTHO05D006300 2.5e-73 279.6 277 59.2
Peaxi162Scf00646g00226 Petunia axillaris HOM05D001406 ORTHO05D006300 5.5e-73 278.5 254 61.8
SalBow2G2741 Salvia bowleyana HOM05D001406 ORTHO05D006300 5.5e-73 278.5 280 58.2
PSO210G3685 Papaver somniferum HOM05D001406 ORTHO05D006300 7.2e-73 278.1 279 58.4
Atru.chr4.2868 Acer truncatum HOM05D001406 ORTHO05D006300 2.7e-72 276.2 274 61.3
PSO170G4998 Papaver somniferum HOM05D001406 ORTHO05D006300 2.7e-72 276.2 279 58.1
HanXRQChr16g0501031 Helianthus annuus HOM05D001406 ORTHO05D006300 3.6e-72 275.8 273 59.0
THA.LOC104821780 Tarenaya hassleriana HOM05D001406 ORTHO05D006300 3.6e-72 275.8 274 61.3
Oeu026316.2 Olea europaea HOM05D001406 ORTHO05D006300 1.5e-70 270.4 279 59.1
PGR031G1922 Punica granatum HOM05D001406 ORTHO05D006300 3.4e-70 269.2 278 57.2
Medtr7g110590 Medicago truncatula HOM05D001406 ORTHO05D006300 2.2e-69 266.5 262 61.1
SHI00255 Sapria himalayana HOM05D001406 ORTHO05D006300 2.2e-69 266.5 277 60.3
BcaC08g43650 Brassica carinata HOM05D001406 ORTHO05D006300 1.4e-68 263.8 273 58.2
Ciclev10004172m.g Citrus clementina HOM05D001406 ORTHO05D006300 1.8e-68 263.5 272 59.2
ECA232G4578 Erigeron canadensis HOM05D001406 ORTHO05D006300 2.5e-65 253.1 304 52.6
Eucgr.C00337 Eucalyptus grandis HOM05D001406 ORTHO05D006300 7.5e-62 241.5 277 53.8
Lsat_1_v5_gn_6_95741 Lactuca sativa HOM05D001406 ORTHO05D006300 5.0e-58 228.8 271 53.5
Os12g0548100 Oryza sativa ssp. japonica HOM05D001406 ORTHO05D006300 2.5e-57 226.5 276 54.0
C06p10680 Brassica napus HOM05D001406 ORTHO05D006300 3.6e-56 222.6 146 79.5
BolC6t36150H Brassica oleracea HOM05D001406 ORTHO05D006300 3.6e-56 222.6 146 79.5
Eucgr.C00458 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.8e-55 218.4 187 65.2
CDE02G0109 Ceratophyllum demersum HOM05D001406 ORTHO05D006300 1.2e-54 217.6 265 50.6
ClCG06G005070 Citrullus lanatus HOM05D001406 ORTHO05D006300 6.4e-53 211.8 264 51.1
SEGI_21479 Sequoiadendron giganteum HOM05D001406 ORTHO05D006300 2.4e-52 209.9 168 65.5
Zm00001eb410230 Zea mays HOM05D001406 ORTHO05D006300 2.4e-52 209.9 276 48.6
unitig_37.g12400 Utricularia gibba HOM05D001406 ORTHO05D004254 5.4e-52 208.8 243 50.6
DCAR_002468 Daucus carota HOM05D001406 ORTHO05D006300 1.2e-51 207.6 235 49.8
SGA_v2.0_scaffold67G22623 Striga asiatica HOM05D001406 ORTHO05D006300 1.2e-51 207.6 248 51.6
Sc13g0003410 Simmondsia chinensis HOM05D001406 ORTHO05D006300 4.6e-51 205.7 153 77.8
SMO144G0076 Selaginella moellendorffii HOM05D001406 ORTHO05D006300 3.1e-47 193.0 248 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1301 Anthoceros agrestis HOM05D001406 ORTHO05D006300 1.5e-46 190.7 169 58.0
Actinidia14294 Actinidia chinensis HOM05D001406 ORTHO05D006300 3.0e-42 176.4 295 45.1
Mapoly0098s0043 Marchantia polymorpha HOM05D001406 ORTHO05D006300 3.3e-41 172.9 199 50.8
QL06p009415 Quercus lobata HOM05D001406 ORTHO05D000006 8.6e-34 148.3 228 48.7
HPP92_015972 Vanilla planifolia HOM05D001406 ORTHO05D006300 8.1e-32 141.7 120 62.5
Eucgr.C00258 Eucalyptus grandis HOM05D001406 ORTHO05D006300 4.0e-31 139.4 113 65.5
CBR_g31398 Chara braunii HOM05D001406 ORTHO05D006300 1.3e-29 134.4 171 46.8
HPP92_015965 Vanilla planifolia HOM05D001406 ORTHO05D006300 2.7e-27 126.7 113 59.3
Eucgr.D00108 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.0e-26 124.8 188 46.3
Cre05.g241150 Chlamydomonas reinhardtii HOM05D001406 ORTHO05D006300 5.8e-22 109.0 188 35.1
CsaV3_UNG044290 Cucumis sativus L. HOM05D001406 ORTHO05D034998 3.4e-14 83.2 83 59.0
CsaV3_UNG075590 Cucumis sativus L. HOM05D001406 ORTHO05D034998 3.4e-14 83.2 83 59.0
PRCOL_00006258 Prasinoderma coloniale HOM05D001406 ORTHO05D006300 1.9e-12 77.4 257 29.2
Lsat_1_v5_gn_9_42060 Lactuca sativa HOM05D001406 ORTHO05D006300 1.2e-11 74.7 52 73.1
Sc13g0003400 Simmondsia chinensis HOM05D001406 ORTHO05D034998 6.2e-08 62.4 58 67.2
CsaV3_UNG225770 Cucumis sativus L. HOM05D001406 ORTHO05D006300 2.4e-07 60.5 37 78.4
QL06p009199 Quercus lobata HOM05D001406 ORTHO05D337037 5.8e-06 55.8 36 77.8


User provided reference genes

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