Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p056460 Quercus lobata HOM05D000274 ORTHO05D016422 6.7e-34 146.7 72 100.0
QL05p056079 Quercus lobata HOM05D000274 ORTHO05D016422 5.3e-31 137.1 72 94.4
QL12p019541 Quercus lobata HOM05D000274 ORTHO05D005226 9.0e-31 136.3 72 93.1
Haze_05056 Corylus avellana HOM05D000274 ORTHO05D005226 1.1e-25 119.4 72 81.9
Sed0014611 Sechium edule HOM05D000274 ORTHO05D005226 1.1e-25 119.4 71 80.3
CiPaw.07G118400 Carya illinoinensis HOM05D000274 ORTHO05D005226 1.9e-25 118.6 72 81.9
Cfa005784 Carpinus fangiana HOM05D000274 ORTHO05D005226 2.5e-25 118.2 72 80.6
Glyma.02G011800 Glycine max HOM05D000274 ORTHO05D005226 5.7e-25 117.1 67 82.1
Glyma.10G012300 Glycine max HOM05D000274 ORTHO05D005226 5.7e-25 117.1 67 82.1
Migut.D00077 Erythranthe guttata HOM05D000274 ORTHO05D005226 7.4e-25 116.7 63 87.3
Gohir.A07G128800 Gossypium hirsutum HOM05D000274 ORTHO05D005226 7.4e-25 116.7 65 83.1
Gohir.D07G133200 Gossypium hirsutum HOM05D000274 ORTHO05D005226 7.4e-25 116.7 65 83.1
Gorai.001G144500 Gossypium raimondii HOM05D000274 ORTHO05D005226 7.4e-25 116.7 65 83.1
SalBow2G0148 Salvia bowleyana HOM05D000274 ORTHO05D005226 9.6e-25 116.3 63 85.7
Cc01_g21500 Coffea canephora HOM05D000274 ORTHO05D005226 1.3e-24 115.9 65 83.1
MELO3C017911.2 Cucumis melo HOM05D000274 ORTHO05D005226 1.3e-24 115.9 70 77.1
Solyc01g100520.3 Solanum lycopersicum HOM05D000274 ORTHO05D005226 1.6e-24 115.5 63 87.3
Sopen01g044030 Solanum pennellii HOM05D000274 ORTHO05D005226 1.6e-24 115.5 63 87.3
PGSC0003DMG400002768 Solanum tuberosum HOM05D000274 ORTHO05D005226 1.6e-24 115.5 63 87.3
Thecc.01G314600 Theobroma cacao HOM05D000274 ORTHO05D005226 1.6e-24 115.5 63 85.7
HanXRQChr10g0285091 Helianthus annuus HOM05D000274 ORTHO05D005226 2.1e-24 115.2 60 90.0
HanXRQChr15g0465051 Helianthus annuus HOM05D000274 ORTHO05D005226 2.1e-24 115.2 60 90.0
Nitab4.5_0000155g0110 Nicotiana tabacum HOM05D000274 ORTHO05D005226 2.8e-24 114.8 63 84.1
Nitab4.5_0000368g0020 Nicotiana tabacum HOM05D000274 ORTHO05D005226 2.8e-24 114.8 63 84.1
Hund07315 Selenicereus undatus HOM05D000274 ORTHO05D005226 2.8e-24 114.8 65 81.5
arahy.Tifrunner.gnm1.ann1.4C5FXK Arachis hypogaea HOM05D000274 ORTHO05D005226 3.7e-24 114.4 67 79.1
arahy.Tifrunner.gnm1.ann1.QD4DE7 Arachis hypogaea HOM05D000274 ORTHO05D005226 3.7e-24 114.4 67 79.1
Gorai.007G122200 Gossypium raimondii HOM05D000274 ORTHO05D005226 3.7e-24 114.4 64 82.8
Lsat_1_v5_gn_9_4800 Lactuca sativa HOM05D000274 ORTHO05D005226 3.7e-24 114.4 62 87.1
Lalb_Chr02g0146871 Lupinus albus HOM05D000274 ORTHO05D005226 3.7e-24 114.4 65 81.5
Lalb_Chr06g0166921 Lupinus albus HOM05D000274 ORTHO05D005226 3.7e-24 114.4 72 76.4
Phvul.007G213700 Phaseolus vulgaris HOM05D000274 ORTHO05D005226 3.7e-24 114.4 67 79.1
Gohir.D11G113600 Gossypium hirsutum HOM05D000274 ORTHO05D005226 4.8e-24 114.0 64 82.8
Aa31LG1G9970 Aethionema arabicum HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
Ah.02g129270 Amaranthus hybridus HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
AL1G11890 Arabidopsis lyrata HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
AT1G02560 Arabidopsis thaliana HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
arahy.Tifrunner.gnm1.ann1.M3MZZX Arachis hypogaea HOM05D000274 ORTHO05D005226 6.2e-24 113.6 67 77.6
EL10Ac4g09458 Beta vulgaris HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
Carub.0001s0162 Capsella rubella HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
CARHR001870 Cardamine hirsuta HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
DCAR_002891 Daucus carota HOM05D000274 ORTHO05D005226 6.2e-24 113.6 62 85.5
Lalb_Chr21g0309641 Lupinus albus HOM05D000274 ORTHO05D005226 6.2e-24 113.6 64 82.8
Peaxi162Scf00673g00434 Petunia axillaris HOM05D000274 ORTHO05D005226 6.2e-24 113.6 63 82.5
Sp1g01580 Schrenkiella parvula HOM05D000274 ORTHO05D005226 6.2e-24 113.6 60 88.3
unitig_0.g282 Utricularia gibba HOM05D000274 ORTHO05D005226 6.2e-24 113.6 65 83.1
COL.COLO4_23222 Corchorus olitorius HOM05D000274 ORTHO05D005226 8.2e-24 113.2 62 85.5
Eucgr.H01006 Eucalyptus grandis HOM05D000274 ORTHO05D005226 8.2e-24 113.2 64 81.2
Nitab4.5_0002033g0030 Nicotiana tabacum HOM05D000274 ORTHO05D005226 8.2e-24 113.2 63 82.5
Sed0020175 Sechium edule HOM05D000274 ORTHO05D005226 8.2e-24 113.2 67 77.6
VMungo0720G2174 Vigna mungo HOM05D000274 ORTHO05D005226 8.2e-24 113.2 67 77.6
ClCG10G011480 Citrullus lanatus HOM05D000274 ORTHO05D005226 1.1e-23 112.8 63 82.5
Gohir.A11G109100 Gossypium hirsutum HOM05D000274 ORTHO05D005226 1.1e-23 112.8 63 82.5
Nitab4.5_0007698g0010 Nicotiana tabacum HOM05D000274 ORTHO05D005226 1.1e-23 112.8 63 81.0
THA.LOC104825937 Tarenaya hassleriana HOM05D000274 ORTHO05D005226 1.1e-23 112.8 62 85.5
Aqoxy5G02550 Aquilegia oxysepala HOM05D000274 ORTHO05D005226 1.4e-23 112.5 63 82.5
arahy.Tifrunner.gnm1.ann1.3UX1AA Arachis hypogaea HOM05D000274 ORTHO05D016422 1.4e-23 112.5 67 77.6
Dinv24447 Davidia involucrata HOM05D000961 ORTHO05D000841 1.4e-23 112.5 62 85.5
Thhalv10008324m.g Eutrema salsugineum HOM05D000274 ORTHO05D005226 1.4e-23 112.5 60 86.7
Gohir.D12G127900 Gossypium hirsutum HOM05D000274 ORTHO05D005226 1.4e-23 112.5 64 82.8
Gorai.008G138800 Gossypium raimondii HOM05D000274 ORTHO05D005226 1.4e-23 112.5 64 82.8
Lj5g0016771 Lotus japonicus HOM05D000274 ORTHO05D005226 1.4e-23 112.5 67 77.6
Oeu038023.1 Olea europaea HOM05D000274 ORTHO05D005226 1.4e-23 112.5 60 86.7
TAR362G0368 Trochodendron aralioides HOM05D000274 ORTHO05D005226 1.4e-23 112.5 63 82.5
TAR362G0602 Trochodendron aralioides HOM05D000274 ORTHO05D005226 1.4e-23 112.5 63 82.5
TAR633G1319 Trochodendron aralioides HOM05D000274 ORTHO05D005226 1.4e-23 112.5 62 83.9
Cpa.g.c47637 Carica papaya HOM05D000274 ORTHO05D016422 1.8e-23 112.1 63 84.1
Cpa.g.sc18.57 Carica papaya HOM05D000274 ORTHO05D005226 1.8e-23 112.1 63 84.1
AUR62000392 Chenopodium quinoa HOM05D000274 ORTHO05D005226 1.8e-23 112.1 60 88.3
AUR62006748 Chenopodium quinoa HOM05D000274 ORTHO05D005226 1.8e-23 112.1 60 88.3
Nn4g25587 Nelumbo nucifera HOM05D000274 ORTHO05D005226 1.8e-23 112.1 63 82.5
Psat6g161200 Pisum sativum HOM05D000274 ORTHO05D005226 1.8e-23 112.1 63 84.1
Atru.chr5.982 Acer truncatum HOM05D000274 ORTHO05D005226 2.4e-23 111.7 66 77.3
MSTRG.21692 Avicennia marina HOM05D000274 ORTHO05D005226 2.4e-23 111.7 65 80.0
CANSAT25G0313 Cannabis sativa HOM05D000274 ORTHO05D005226 2.4e-23 111.7 62 83.9
PSO170G1244 Papaver somniferum HOM05D000274 ORTHO05D005226 2.4e-23 111.7 62 83.9
PSO357G0656 Papaver somniferum HOM05D000274 ORTHO05D005226 2.4e-23 111.7 62 83.9
PGR083G1125 Punica granatum HOM05D000274 ORTHO05D005226 2.4e-23 111.7 62 83.9
unitig_60.g25652 Utricularia gibba HOM05D000274 ORTHO05D005226 2.4e-23 111.7 65 80.0
Hma1.2p1_0408F.1_g146620 Hydrangea macrophylla HOM05D000274 ORTHO05D005226 3.1e-23 111.3 63 81.0
ATR0796G264 Amborella trichopoda HOM05D000274 ORTHO05D005226 4.0e-23 110.9 66 78.8
Ciclev10021318m.g Citrus clementina HOM05D000274 ORTHO05D005226 4.0e-23 110.9 67 76.1
Dinv10109 Davidia involucrata HOM05D000274 ORTHO05D005226 4.0e-23 110.9 60 85.0
ECA247G0940 Erigeron canadensis HOM05D000274 ORTHO05D005226 4.0e-23 110.9 60 86.7
Potri.002G195200 Populus trichocarpa HOM05D000274 ORTHO05D005226 4.0e-23 110.9 65 76.9
Potri.014G119700 Populus trichocarpa HOM05D000274 ORTHO05D005226 4.0e-23 110.9 65 76.9
Sabra14G0088700 Salix brachista HOM05D000274 ORTHO05D005226 4.0e-23 110.9 65 76.9
Sc16g0009050 Simmondsia chinensis HOM05D000274 ORTHO05D005226 4.0e-23 110.9 59 86.4
BcaB03g15771 Brassica carinata HOM05D000274 ORTHO05D005226 5.3e-23 110.5 60 86.7
Peaxi162Scf00595g00425 Petunia axillaris HOM05D000274 ORTHO05D016422 5.3e-23 110.5 63 79.4
Ca_10278_v3 Cicer arietinum L. HOM05D000274 ORTHO05D005226 6.9e-23 110.2 67 76.1
GSVIVG01028130001 Vitis vinifera HOM05D000274 ORTHO05D005226 6.9e-23 110.2 63 79.4
arahy.Tifrunner.gnm1.ann1.B484Q0 Arachis hypogaea HOM05D000274 ORTHO05D005226 9.0e-23 109.8 58 86.2
HanXRQChr04g0115441 Helianthus annuus HOM05D000274 ORTHO05D016422 9.0e-23 109.8 58 86.2
Lj5A332G22 Lonicera japonica HOM05D000274 ORTHO05D005226 9.0e-23 109.8 65 78.5
Medtr1g086940 Medicago truncatula HOM05D000274 ORTHO05D005226 9.0e-23 109.8 67 76.1
Nn3g21705 Nelumbo nucifera HOM05D000274 ORTHO05D005226 9.0e-23 109.8 58 86.2
BcaB03g13509 Brassica carinata HOM05D000274 ORTHO05D016422 1.2e-22 109.4 60 85.0
A10p01290 Brassica napus HOM05D000274 ORTHO05D005226 1.2e-22 109.4 60 85.0
C05p01290 Brassica napus HOM05D000274 ORTHO05D005226 1.2e-22 109.4 60 85.0
BraA10t42407Z Brassica rapa HOM05D000274 ORTHO05D005226 1.2e-22 109.4 60 85.0
Ca_09216_v3 Cicer arietinum L. HOM05D001340 ORTHO05D002318 1.2e-22 109.4 62 82.3
Medtr7g109610 Medicago truncatula HOM05D000274 ORTHO05D005226 1.2e-22 109.4 67 76.1
RcHm_v2.0_Chr7g0241011 Rosa chinensis HOM05D000274 ORTHO05D005226 1.2e-22 109.4 64 78.1
FvH4_5g39050 Fragaria vesca HOM05D000274 ORTHO05D005226 1.5e-22 109.0 64 79.7
FAN08G1938 Fragaria x ananassa HOM05D000274 ORTHO05D005226 1.5e-22 109.0 64 79.7
FAN18G1796 Fragaria x ananassa HOM05D000274 ORTHO05D005226 1.5e-22 109.0 64 79.7
Manes.01G228600 Manihot esculenta HOM05D000274 ORTHO05D005226 1.5e-22 109.0 65 76.9
Prupe.8G265800 Prunus persica HOM05D000274 ORTHO05D005226 1.5e-22 109.0 65 76.9
CSS0001410 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D005226 2.0e-22 108.6 63 79.4
CSS0022373 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D005226 2.0e-22 108.6 63 79.4
FAN04G2519 Fragaria x ananassa HOM05D000274 ORTHO05D005226 2.0e-22 108.6 64 78.1
FAN13G1061 Fragaria x ananassa HOM05D000274 ORTHO05D005226 2.0e-22 108.6 64 78.1
MD00G1140700 Malus domestica HOM05D000274 ORTHO05D005226 2.0e-22 108.6 65 78.5
CDE01G0373 Ceratophyllum demersum HOM05D000274 ORTHO05D005226 2.6e-22 108.2 58 84.5
CDE12G0128 Ceratophyllum demersum HOM05D000274 ORTHO05D005226 2.6e-22 108.2 65 76.9
Os03g0308100 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D005226 2.6e-22 108.2 60 85.0
Zm00001eb396050 Zea mays HOM05D000274 ORTHO05D005226 2.6e-22 108.2 60 85.0
CsaV3_4G001270 Cucumis sativus L. HOM05D000274 ORTHO05D005226 3.4e-22 107.8 67 74.6
TWI38G0988 Tripterygium wilfordii HOM05D000274 ORTHO05D005226 3.4e-22 107.8 67 73.1
TWI59G0892 Tripterygium wilfordii HOM05D000274 ORTHO05D005226 3.4e-22 107.8 64 76.6
Gorai.005G116900 Gossypium raimondii HOM05D000274 ORTHO05D005226 4.5e-22 107.5 64 78.1
MD03G1292800 Malus domestica HOM05D000274 ORTHO05D005226 5.8e-22 107.1 60 81.7
TPR.G38686 Trifolium pratense HOM05D000274 ORTHO05D005226 7.6e-22 106.7 67 73.1
A08p37650 Brassica napus HOM05D000274 ORTHO05D005226 1.7e-21 105.5 59 83.1
BraA08t35661Z Brassica rapa HOM05D000274 ORTHO05D005226 1.7e-21 105.5 59 83.1
Manes.05G004400 Manihot esculenta HOM05D000274 ORTHO05D005226 1.7e-21 105.5 60 80.0
Sabra02G0161600 Salix brachista HOM05D000274 ORTHO05D005226 1.7e-21 105.5 60 81.7
CDE02G3025 Ceratophyllum demersum HOM05D000274 ORTHO05D005226 2.9e-21 104.8 65 73.8
C08p00110 Brassica napus HOM05D000274 ORTHO05D005226 5.0e-21 104.0 59 83.1
BolC8t46813H Brassica oleracea HOM05D000274 ORTHO05D005226 5.0e-21 104.0 59 83.1
CDE08G0200 Ceratophyllum demersum HOM05D000274 ORTHO05D005226 6.5e-21 103.6 65 72.3
Ciclev10001988m.g Citrus clementina HOM05D000274 ORTHO05D005226 8.4e-21 103.2 62 74.2
HanXRQChr01g0004341 Helianthus annuus HOM05D000274 ORTHO05D005226 1.1e-20 102.8 58 81.0
HanXRQChr11g0351711 Helianthus annuus HOM05D000274 ORTHO05D005226 1.1e-20 102.8 58 81.0
HanXRQChr17g0569091 Helianthus annuus HOM05D000274 ORTHO05D016422 1.1e-20 102.8 58 81.0
Atru.chr2.199 Acer truncatum HOM05D000274 ORTHO05D005226 2.5e-20 101.7 63 73.0
AagrBONN_evm.TU.Sc2ySwM_117.1744 Anthoceros agrestis HOM05D000274 ORTHO05D005226 2.5e-20 101.7 58 82.8
Duzib138G0023 Durio zibethinus HOM05D000274 ORTHO05D005226 5.5e-20 100.5 64 70.3
Mapoly0055s0124 Marchantia polymorpha HOM05D000274 ORTHO05D005226 2.1e-19 98.6 64 75.0
Duzib133G0220 Durio zibethinus HOM05D000274 ORTHO05D005226 2.7e-19 98.2 63 74.6
CSS0009444 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D005226 4.6e-19 97.4 56 78.6
Pp3c24_11660 Physcomitrium patens HOM05D000274 ORTHO05D005226 1.3e-18 95.9 60 75.0
SMO358G0748 Selaginella moellendorffii HOM05D000274 ORTHO05D005226 1.8e-18 95.5 60 75.0
Pp3c23_19030 Physcomitrium patens HOM05D000274 ORTHO05D005226 2.3e-18 95.1 58 75.9
CBR_g45224 Chara braunii HOM05D000274 ORTHO05D005226 6.7e-18 93.6 70 68.6
Pp3c8_17570 Physcomitrium patens HOM05D000274 ORTHO05D005226 6.7e-18 93.6 66 71.2
SEGI_34453 Sequoiadendron giganteum HOM05D000274 ORTHO05D005226 1.6e-16 89.0 58 69.0
vmacro15108 Vaccinium macrocarpon HOM05D000274 ORTHO05D005226 1.6e-16 89.0 62 71.0
SGA_v2.0_scaffold334G49072 Striga asiatica HOM05D000274 ORTHO05D005226 3.7e-16 87.8 60 70.0
HPP92_000356 Vanilla planifolia HOM05D000274 ORTHO05D005226 6.3e-16 87.0 66 65.2
Duzib211G0667 Durio zibethinus HOM05D000274 ORTHO05D005226 8.2e-16 86.7 64 59.4
SGA_v2.0_scaffold376G50287 Striga asiatica HOM05D001902 ORTHO05D001973 1.1e-15 86.3 60 70.0
Actinidia20990 Actinidia chinensis HOM05D000274 ORTHO05D016422 2.4e-15 85.1 65 63.1
Actinidia25854 Actinidia chinensis HOM05D000274 ORTHO05D005226 3.1e-15 84.7 63 66.7
Rhsim01G0291400 Rhododendron simsii HOM05D000274 ORTHO05D005226 9.0e-15 83.2 59 71.2
vmacro02398 Vaccinium macrocarpon HOM05D000274 ORTHO05D005226 1.5e-14 82.4 60 66.7
Rhsim13G0004600 Rhododendron simsii HOM05D000274 ORTHO05D005226 2.6e-14 81.6 51 66.7
HPP92_003171 Vanilla planifolia HOM05D000274 ORTHO05D005226 3.4e-14 81.3 64 60.9
Actinidia17906 Actinidia chinensis HOM05D000274 ORTHO05D005226 1.4e-12 75.9 64 56.2
MCO01G339 Micromonas commoda HOM05D000274 ORTHO05D005226 6.1e-11 70.5 51 64.7
GSVIVG01025766001 Vitis vinifera HOM05D000274 ORTHO05D016422 1.4e-10 69.3 54 57.4
Cre12.g486100 Chlamydomonas reinhardtii HOM05D000274 ORTHO05D005226 8.8e-10 66.6 51 58.8
PRCOL_00004878 Prasinoderma coloniale HOM05D000274 ORTHO05D005226 7.4e-09 63.5 48 56.2
MCO01G374 Micromonas commoda HOM05D000274 ORTHO05D006929 4.1e-07 57.8 48 52.1
Cre12.g500950 Chlamydomonas reinhardtii HOM05D000274 ORTHO05D006929 2.0e-06 55.5 48 56.2
CBR_g45495 Chara braunii HOM05D000274 ORTHO05D007831 3.4e-06 54.7 48 47.9


User provided reference genes

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