Gene: COL.COLO4_23222

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_23222
  • Transcript Identifier COL.rna21963
  • Gene Type Coding gene
  • Location AWUE01018173.1 : 55947-58656 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna21963
  • GenBank OMO82115.1
  • id gene23194
  • gene_name COLO4_23222
  • uniprot A0A1R3IHS3

Descriptions

  • Description ClpP
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004252
IEA
GOA Databaseserine-type endopeptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008236
IEA
GOA Databaseserine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0004176
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IEA
InterProATP-dependent peptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G02560
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G02560
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G02560
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G02560
GO:0009840
ISO
PLAZA Integrative Orthologychloroplastic endopeptidase Clp complex AT1G02560
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT1G02560
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G02560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001907 ATP-dependent Clp protease proteolytic subunit
IPR029045 ClpP/crotonase-like domain superfamily
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
Mapman id Description
19.4.2.9.1 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.proteolytic core component ClpP1/3-6