Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p007703 Quercus lobata HOM05D006077 ORTHO05D007499 1.4e-116 422.9 208 100.0
CiPaw.02G136000 Carya illinoinensis HOM05D006077 ORTHO05D007499 1.2e-32 144.1 207 44.4
Ah.08g216780 Amaranthus hybridus HOM05D006077 ORTHO05D007499 1.8e-31 140.2 211 42.7
FAN05G2137 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.4e-31 139.8 204 45.6
Thecc.06G119600 Theobroma cacao HOM05D006077 ORTHO05D007499 8.9e-31 137.9 208 43.8
CAN.G1368.2 Capsicum annuum HOM05D006077 ORTHO05D007499 1.5e-30 137.1 64 98.4
FvH4_6g34660 Fragaria vesca HOM05D006077 ORTHO05D007499 2.0e-30 136.7 64 96.9
FAN09G3570 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.0e-30 136.7 64 96.9
FAN14G4463 Fragaria x ananassa HOM05D006077 ORTHO05D007499 2.0e-30 136.7 64 96.9
RcHm_v2.0_Chr2g0145211 Rosa chinensis HOM05D006077 ORTHO05D007499 2.0e-30 136.7 64 96.9
GSVIVG01016766001 Vitis vinifera HOM05D006077 ORTHO05D007499 2.0e-30 136.7 204 42.6
Haze_16030 Corylus avellana HOM05D006077 ORTHO05D007499 3.4e-30 136.0 208 43.8
Rhsim08G0238900 Rhododendron simsii HOM05D006077 ORTHO05D007499 4.4e-30 135.6 82 80.5
CANSAT64G2602 Cannabis sativa HOM05D006077 ORTHO05D007499 7.6e-30 134.8 64 95.3
CANSAT64G0122 Cannabis sativa HOM05D006077 ORTHO05D007499 9.9e-30 134.4 208 41.3
Glyma.07G038100 Glycine max HOM05D006077 ORTHO05D007499 9.9e-30 134.4 64 96.9
Lalb_Chr01g0013591 Lupinus albus HOM05D006077 ORTHO05D007499 9.9e-30 134.4 64 96.9
Medtr8g020500 Medicago truncatula HOM05D006077 ORTHO05D007499 9.9e-30 134.4 64 96.9
Phvul.010G130300 Phaseolus vulgaris HOM05D006077 ORTHO05D007499 9.9e-30 134.4 64 96.9
AT1G54210 Arabidopsis thaliana HOM05D006077 ORTHO05D007499 1.3e-29 134.0 208 41.8
CSS0011852 Camellia sinensis var. sinensis HOM05D006077 ORTHO05D007499 1.3e-29 134.0 204 42.6
CiPaw.01G218900 Carya illinoinensis HOM05D006077 ORTHO05D007499 1.3e-29 134.0 209 43.1
Glyma.16G007300 Glycine max HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 95.3
Lj3g0010947 Lotus japonicus HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 93.8
Psat4g182400 Pisum sativum HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 95.3
Solyc12g049310.2 Solanum lycopersicum HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 96.9
Sopen12g023790 Solanum pennellii HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 96.9
TPR.G32491 Trifolium pratense HOM05D006077 ORTHO05D007499 1.3e-29 134.0 64 95.3
Actinidia26028 Actinidia chinensis HOM05D006077 ORTHO05D007499 1.7e-29 133.7 64 96.9
Hma1.2p1_0291F.1_g115130 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 2.2e-29 133.3 64 95.3
TWI79G1574 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 2.2e-29 133.3 64 96.9
Dinv37869 Davidia involucrata HOM05D006077 ORTHO05D007499 3.8e-29 132.5 204 42.6
MD09G1183900 Malus domestica HOM05D006077 ORTHO05D007499 3.8e-29 132.5 64 95.3
Prupe.3G042200 Prunus persica HOM05D006077 ORTHO05D007499 3.8e-29 132.5 64 95.3
TAR636G2213 Trochodendron aralioides HOM05D006077 ORTHO05D007499 3.8e-29 132.5 64 95.3
VMungo0331G1077 Vigna mungo HOM05D006077 ORTHO05D007499 3.8e-29 132.5 204 41.7
ATR0598G320 Amborella trichopoda HOM05D006077 ORTHO05D007499 4.9e-29 132.1 64 95.3
Migut.D00939 Erythranthe guttata HOM05D006077 ORTHO05D007499 4.9e-29 132.1 64 95.3
Gohir.A05G405800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 4.9e-29 132.1 64 95.3
Manes.11G020500 Manihot esculenta HOM05D006077 ORTHO05D007499 4.9e-29 132.1 64 92.2
PSO421G0038 Papaver somniferum HOM05D006077 ORTHO05D007499 4.9e-29 132.1 64 95.3
Carub.0001s4344 Capsella rubella HOM05D006077 ORTHO05D007499 6.4e-29 131.7 64 93.8
Gohir.D04G009800 Gossypium hirsutum HOM05D006077 ORTHO05D007499 6.4e-29 131.7 208 42.8
Gorai.012G011600 Gossypium raimondii HOM05D006077 ORTHO05D007499 6.4e-29 131.7 208 42.8
Hma1.2p1_0496F.1_g166240 Hydrangea macrophylla HOM05D006077 ORTHO05D007499 6.4e-29 131.7 64 93.8
TWI75G1673 Tripterygium wilfordii HOM05D006077 ORTHO05D007499 6.4e-29 131.7 64 95.3
Peaxi162Scf00177g00511 Petunia axillaris HOM05D006077 ORTHO05D007499 8.4e-29 131.3 64 95.3
Sc15g0000510 Simmondsia chinensis HOM05D006077 ORTHO05D007499 8.4e-29 131.3 64 93.8
CDE11G1182 Ceratophyllum demersum HOM05D006077 ORTHO05D007499 1.1e-28 131.0 64 90.6
RcHm_v2.0_Chr3g0490611 Rosa chinensis HOM05D006077 ORTHO05D007499 1.1e-28 131.0 64 93.8
Aqoxy7G01092 Aquilegia oxysepala HOM05D006077 ORTHO05D007499 2.4e-28 129.8 208 42.3
RcHm_v2.0_Chr5g0053491 Rosa chinensis HOM05D006077 ORTHO05D007499 2.4e-28 129.8 64 93.8
Hund05739 Selenicereus undatus HOM05D006077 ORTHO05D007499 2.4e-28 129.8 64 92.2
arahy.Tifrunner.gnm1.ann1.G5XP6S Arachis hypogaea HOM05D006077 ORTHO05D007499 4.2e-28 129.0 208 41.8
arahy.Tifrunner.gnm1.ann1.G7AU8E Arachis hypogaea HOM05D006077 ORTHO05D007499 4.2e-28 129.0 208 41.8
PSO063G4040 Papaver somniferum HOM05D006077 ORTHO05D007499 4.2e-28 129.0 64 93.8
THA.LOC104822655 Tarenaya hassleriana HOM05D006077 ORTHO05D007499 4.2e-28 129.0 64 93.8
AL1G62920 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 5.4e-28 128.6 64 92.2
SalBow6G4082 Salvia bowleyana HOM05D006077 ORTHO05D007499 9.2e-28 127.9 64 92.2
SalBow6G4389 Salvia bowleyana HOM05D006077 ORTHO05D007499 9.2e-28 127.9 64 92.2
AL3G26170 Arabidopsis lyrata HOM05D006077 ORTHO05D007499 1.6e-27 127.1 64 90.6
ECA232G1087 Erigeron canadensis HOM05D006077 ORTHO05D007499 1.6e-27 127.1 64 90.6
Aa31LG8G1170 Aethionema arabicum HOM05D006077 ORTHO05D007499 3.5e-27 125.9 64 90.6
CARHR044580 Cardamine hirsuta HOM05D006077 ORTHO05D007499 3.5e-27 125.9 64 90.6
Sp3g12220 Schrenkiella parvula HOM05D006077 ORTHO05D007499 3.5e-27 125.9 64 90.6
Cc00_g21000 Coffea canephora HOM05D006077 ORTHO05D007499 4.6e-27 125.6 64 87.5
BcaB07g33245 Brassica carinata HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
BcaB07g33246 Brassica carinata HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
BcaC08g43600 Brassica carinata HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
A06p00460 Brassica napus HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
C06p09980 Brassica napus HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
BolC6t36071H Brassica oleracea HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
BraA06t23260Z Brassica rapa HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
Thhalv10011896m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 90.6
Potri.001G169700 Populus trichocarpa HOM05D006077 ORTHO05D007499 7.8e-27 124.8 64 85.9
Eucgr.F03177 Eucalyptus grandis HOM05D006077 ORTHO05D007499 1.0e-26 124.4 64 90.6
Lsat_1_v5_gn_4_92920 Lactuca sativa HOM05D006077 ORTHO05D007499 1.3e-26 124.0 64 89.1
BcaC05g29136 Brassica carinata HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
A05p35440 Brassica napus HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
C05p53730 Brassica napus HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
BolC5t34043H Brassica oleracea HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
BraA05t22354Z Brassica rapa HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
Ciclev10026605m.g Citrus clementina HOM05D006077 ORTHO05D007499 1.7e-26 123.6 64 89.1
BcaB06g25414 Brassica carinata HOM05D006077 ORTHO05D007499 2.3e-26 123.2 64 89.1
Carub.0003s1355 Capsella rubella HOM05D006077 ORTHO05D007499 2.3e-26 123.2 64 89.1
Mapoly0025s0134 Marchantia polymorpha HOM05D006077 ORTHO05D007499 1.5e-25 120.6 64 82.8
Potri.003G064300 Populus trichocarpa HOM05D006077 ORTHO05D007499 1.9e-25 120.2 64 84.4
SalBow6G7202 Salvia bowleyana HOM05D006077 ORTHO05D007499 2.5e-25 119.8 71 83.1
ClCG07G014030 Citrullus lanatus HOM05D006077 ORTHO05D007499 4.3e-25 119.0 64 81.2
MELO3C025809.2 Cucumis melo HOM05D006077 ORTHO05D007499 4.3e-25 119.0 64 81.2
CsaV3_3G043520 Cucumis sativus L. HOM05D006077 ORTHO05D007499 4.3e-25 119.0 64 81.2
Zm00001eb256700 Zea mays HOM05D006077 ORTHO05D007499 5.6e-25 118.6 64 84.4
Pp3c4_29920 Physcomitrium patens HOM05D006077 ORTHO05D007499 9.6e-25 117.9 64 81.2
Sed0008411 Sechium edule HOM05D006077 ORTHO05D007499 1.6e-24 117.1 64 81.2
AagrBONN_evm.TU.Sc2ySwM_228.485 Anthoceros agrestis HOM05D006077 ORTHO05D007499 2.8e-24 116.3 64 79.7
Manes.04G144301 Manihot esculenta HOM05D006077 ORTHO05D007499 2.8e-24 116.3 63 84.1
Os06g0205000 Oryza sativa ssp. japonica HOM05D006077 ORTHO05D007499 3.6e-24 115.9 64 78.1
Sed0025034 Sechium edule HOM05D006077 ORTHO05D007499 4.7e-24 115.5 64 79.7
RcHm_v2.0_Chr5g0040601 Rosa chinensis HOM05D006077 ORTHO05D007499 1.1e-23 114.4 63 81.0
Nn4g24846 Nelumbo nucifera HOM05D006077 ORTHO05D007499 6.9e-23 111.7 56 92.9
unitig_699.g19648 Utricularia gibba HOM05D002868 ORTHO05D003477 3.2e-20 102.8 54 87.0
vmacro15032 Vaccinium macrocarpon HOM05D006077 ORTHO05D007499 6.6e-18 95.1 49 95.9
SGA_v2.0_scaffold4G02063 Striga asiatica HOM05D006077 ORTHO05D007499 1.1e-17 94.4 64 71.9
COL.COLO4_30761 Corchorus olitorius HOM05D006077 ORTHO05D007499 3.3e-17 92.8 189 37.6
PGSC0003DMG400011604 Solanum tuberosum HOM05D006077 ORTHO05D007499 3.3e-17 92.8 44 93.2
CBR_g34185 Chara braunii HOM05D000019 ORTHO05D001702 5.6e-17 92.0 54 75.9
CANSAT25G1718 Cannabis sativa HOM05D006077 ORTHO05D007499 7.3e-17 91.7 189 35.4
Duzib235G0120 Durio zibethinus HOM05D006077 ORTHO05D007499 1.3e-16 90.9 189 37.6
Nitab4.5_0000189g0210 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.6e-16 90.5 40 100.0
Nitab4.5_0001199g0100 Nicotiana tabacum HOM05D006077 ORTHO05D007499 1.6e-16 90.5 40 100.0
Oeu015484.1 Olea europaea HOM05D006077 ORTHO05D007499 4.8e-16 89.0 45 93.3
EL10Ac7g16407 Beta vulgaris HOM05D006077 ORTHO05D007499 1.8e-15 87.0 45 86.7
AUR62009882 Chenopodium quinoa HOM05D006077 ORTHO05D007499 1.8e-15 87.0 47 80.9
Duzib192G0164 Durio zibethinus HOM05D006077 ORTHO05D007499 4.0e-15 85.9 189 36.0
Thhalv10021863m.g Eutrema salsugineum HOM05D006077 ORTHO05D007499 4.0e-15 85.9 40 95.0
FAN02G4125 Fragaria x ananassa HOM05D006077 ORTHO05D007499 9.0e-15 84.7 68 64.7
SMO364G0450 Selaginella moellendorffii HOM05D006077 ORTHO05D007499 9.0e-15 84.7 64 57.8
Sabra03G0038000 Salix brachista HOM05D006077 ORTHO05D007499 1.2e-14 84.3 45 84.4
CARHR088790 Cardamine hirsuta HOM05D006077 ORTHO05D007499 2.6e-14 83.2 45 86.7
DCAR_022696 Daucus carota HOM05D006077 ORTHO05D007499 2.6e-14 83.2 43 90.7
Atru.chr1.3943 Acer truncatum HOM05D006077 ORTHO05D007499 1.7e-13 80.5 60 71.7
HPP92_019155 Vanilla planifolia HOM05D006077 ORTHO05D007499 2.2e-13 80.1 45 80.0
MCO16G375 Micromonas commoda HOM05D006077 ORTHO05D007499 5.1e-10 68.9 69 50.7
PRCOL_00003774 Prasinoderma coloniale HOM05D006077 ORTHO05D007499 1.5e-09 67.4 64 42.2
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-07 58.9 122 30.3
QL06p010043 Quercus lobata HOM05D000003 ORTHO05D000004 5.3e-07 58.9 122 31.1
QL06p025333 Quercus lobata HOM05D002747 ORTHO05D003069 5.3e-07 58.9 139 28.1
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 57.8 122 29.5
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 2.6e-06 56.6 151 29.1
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 4.5e-06 55.8 122 29.5
Cre12.g557000 Chlamydomonas reinhardtii HOM05D006077 ORTHO05D007499 7.6e-06 55.1 64 39.1
QL02p091725 Quercus lobata HOM05D000399 ORTHO05D000304 7.6e-06 55.1 122 29.5


User provided reference genes

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